BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte10p02
(699 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY119482-1|AAM50136.1| 509|Drosophila melanogaster GH07166p pro... 60 4e-09
AJ010169-1|CAA09030.1| 509|Drosophila melanogaster Ariadne-2 pr... 60 4e-09
AE013599-3363|AAF46823.1| 509|Drosophila melanogaster CG5709-PA... 60 4e-09
>AY119482-1|AAM50136.1| 509|Drosophila melanogaster GH07166p
protein.
Length = 509
Score = 59.7 bits (138), Expect = 4e-09
Identities = 28/78 (35%), Positives = 42/78 (53%)
Frame = +1
Query: 379 MEVADRTKSDPEYFVFSCXXXXXXXXXXXXXXXXXXXXXQITPSLAKVALHAYEWNAQEI 558
+E D ++DPEYF + C QITPSLAKV L ++WN +
Sbjct: 32 VERLDPKRADPEYFEYECLTVEDIEKLLNERVEKLNTILQITPSLAKVLLLEHQWNNVAV 91
Query: 559 INKYKENANEVLVFSRVK 612
+ KY+++AN +LV +R+K
Sbjct: 92 VEKYRQDANALLVTARIK 109
>AJ010169-1|CAA09030.1| 509|Drosophila melanogaster Ariadne-2
protein protein.
Length = 509
Score = 59.7 bits (138), Expect = 4e-09
Identities = 28/78 (35%), Positives = 42/78 (53%)
Frame = +1
Query: 379 MEVADRTKSDPEYFVFSCXXXXXXXXXXXXXXXXXXXXXQITPSLAKVALHAYEWNAQEI 558
+E D ++DPEYF + C QITPSLAKV L ++WN +
Sbjct: 32 VERLDPKRADPEYFEYECLTVEDIEKLLNERVEKLNTILQITPSLAKVLLLEHQWNNVAV 91
Query: 559 INKYKENANEVLVFSRVK 612
+ KY+++AN +LV +R+K
Sbjct: 92 VEKYRQDANALLVTARIK 109
>AE013599-3363|AAF46823.1| 509|Drosophila melanogaster CG5709-PA
protein.
Length = 509
Score = 59.7 bits (138), Expect = 4e-09
Identities = 28/78 (35%), Positives = 42/78 (53%)
Frame = +1
Query: 379 MEVADRTKSDPEYFVFSCXXXXXXXXXXXXXXXXXXXXXQITPSLAKVALHAYEWNAQEI 558
+E D ++DPEYF + C QITPSLAKV L ++WN +
Sbjct: 32 VERLDPKRADPEYFEYECLTVEDIEKLLNERVEKLNTILQITPSLAKVLLLEHQWNNVAV 91
Query: 559 INKYKENANEVLVFSRVK 612
+ KY+++AN +LV +R+K
Sbjct: 92 VEKYRQDANALLVTARIK 109
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,193,549
Number of Sequences: 53049
Number of extensions: 409361
Number of successful extensions: 647
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 634
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 644
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3067209849
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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