BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte10p01
(291 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 25 0.25
M29492-1|AAA27727.1| 74|Apis mellifera protein ( Bee homeobox-... 23 1.0
DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex det... 22 1.8
DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex det... 22 1.8
DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex det... 22 1.8
DQ485319-1|ABF21078.1| 175|Apis mellifera icarapin variant 2 pr... 20 5.4
DQ485318-1|ABF21077.1| 223|Apis mellifera icarapin variant 1 pr... 20 5.4
AY939856-1|AAX33236.1| 223|Apis mellifera venom carbohydrate-ri... 20 5.4
AY897570-1|AAW81036.1| 223|Apis mellifera venom protein 2 protein. 20 5.4
AY526236-1|AAS20469.1| 85|Apis mellifera epoxide hydrolase pro... 20 5.4
AY398690-1|AAR83734.1| 416|Apis mellifera major royal jelly pro... 20 5.4
AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein. 20 5.4
DQ435325-1|ABD92640.1| 160|Apis mellifera OBP7 protein. 19 9.4
AF023619-1|AAC39040.1| 355|Apis mellifera arginine kinase protein. 19 9.4
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 24.6 bits (51), Expect = 0.25
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +3
Query: 108 NIGAV*NVGTHYLPNFKEPL 167
++GAV VGT P F+EPL
Sbjct: 456 DLGAVATVGTTVAPCFEEPL 475
>M29492-1|AAA27727.1| 74|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone H40. ).
Length = 74
Score = 22.6 bits (46), Expect = 1.0
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +3
Query: 42 KTSRYLYFCECLNV 83
KT+RYL CE LN+
Sbjct: 28 KTTRYLSVCERLNL 41
>DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.8 bits (44), Expect = 1.8
Identities = 9/40 (22%), Positives = 23/40 (57%)
Frame = +3
Query: 168 YRKTAMKSQYFQVKRKKHTQNCFLVEVASKLH*NNMTFKK 287
YR+T+ + + +R+K ++ + +++ + NN +KK
Sbjct: 59 YRETSKERSRDRKEREKSKEHKIISSLSNNYNYNNNNYKK 98
>DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.8 bits (44), Expect = 1.8
Identities = 9/40 (22%), Positives = 23/40 (57%)
Frame = +3
Query: 168 YRKTAMKSQYFQVKRKKHTQNCFLVEVASKLH*NNMTFKK 287
YR+T+ + + +R+K ++ + +++ + NN +KK
Sbjct: 59 YRETSKERSRDRKEREKSKEHKIISSLSNNYNYNNNNYKK 98
>DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.8 bits (44), Expect = 1.8
Identities = 9/40 (22%), Positives = 23/40 (57%)
Frame = +3
Query: 168 YRKTAMKSQYFQVKRKKHTQNCFLVEVASKLH*NNMTFKK 287
YR+T+ + + +R+K ++ + +++ + NN +KK
Sbjct: 59 YRETSKERSRDRKEREKSKEHKIISSLSNNYNYNNNNYKK 98
>DQ485319-1|ABF21078.1| 175|Apis mellifera icarapin variant 2
precursor protein.
Length = 175
Score = 20.2 bits (40), Expect = 5.4
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -2
Query: 56 VPTRFGKNKTFSPRWRSI 3
+PT GKN+T + RS+
Sbjct: 138 LPTLIGKNETSTQSSRSV 155
>DQ485318-1|ABF21077.1| 223|Apis mellifera icarapin variant 1
precursor protein.
Length = 223
Score = 20.2 bits (40), Expect = 5.4
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -2
Query: 56 VPTRFGKNKTFSPRWRSI 3
+PT GKN+T + RS+
Sbjct: 186 LPTLIGKNETSTQSSRSV 203
>AY939856-1|AAX33236.1| 223|Apis mellifera venom carbohydrate-rich
protein precursor protein.
Length = 223
Score = 20.2 bits (40), Expect = 5.4
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -2
Query: 56 VPTRFGKNKTFSPRWRSI 3
+PT GKN+T + RS+
Sbjct: 186 LPTLIGKNETSTQSSRSV 203
>AY897570-1|AAW81036.1| 223|Apis mellifera venom protein 2 protein.
Length = 223
Score = 20.2 bits (40), Expect = 5.4
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -2
Query: 56 VPTRFGKNKTFSPRWRSI 3
+PT GKN+T + RS+
Sbjct: 186 LPTLIGKNETSTQSSRSV 203
>AY526236-1|AAS20469.1| 85|Apis mellifera epoxide hydrolase
protein.
Length = 85
Score = 20.2 bits (40), Expect = 5.4
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +1
Query: 1 DMDRHLGEKVLFLPKRVGTSISASVLMW 84
DM EK++ L + TS++ S L W
Sbjct: 12 DMAVLFPEKIIGLHNNMCTSLNLSNLFW 39
>AY398690-1|AAR83734.1| 416|Apis mellifera major royal jelly
protein 8 protein.
Length = 416
Score = 20.2 bits (40), Expect = 5.4
Identities = 7/18 (38%), Positives = 12/18 (66%)
Frame = +1
Query: 193 NIFKLNGKNTLKIVF*WK 246
+I N N+LK+++ WK
Sbjct: 19 DIHSRNLTNSLKVIYEWK 36
>AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein.
Length = 554
Score = 20.2 bits (40), Expect = 5.4
Identities = 12/32 (37%), Positives = 15/32 (46%)
Frame = -2
Query: 110 VVALTNPRSHIKTLAEIEVPTRFGKNKTFSPR 15
+ A T+ S L E+ P R KNK PR
Sbjct: 410 IQAATSSVSDDLYLLELGFPPRSKKNKLKKPR 441
>DQ435325-1|ABD92640.1| 160|Apis mellifera OBP7 protein.
Length = 160
Score = 19.4 bits (38), Expect = 9.4
Identities = 6/14 (42%), Positives = 7/14 (50%)
Frame = +3
Query: 69 ECLNVGPRVRKCNN 110
EC+N KC N
Sbjct: 117 ECINANKSTDKCEN 130
>AF023619-1|AAC39040.1| 355|Apis mellifera arginine kinase protein.
Length = 355
Score = 19.4 bits (38), Expect = 9.4
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = +1
Query: 34 FLPKRVGTSISASV 75
F P +GT++ ASV
Sbjct: 269 FCPTNLGTTVRASV 282
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,746
Number of Sequences: 438
Number of extensions: 1586
Number of successful extensions: 14
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used: 5869407
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)
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