Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10o24
         (460 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    21   5.5  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    21   5.5  
U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     20   9.6  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    20   9.6  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           20   9.6  

>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 21.0 bits (42), Expect = 5.5
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -1

Query: 166 TFMSCRYVKISKYN 125
           TF+SCR+ + + YN
Sbjct: 81  TFLSCRFHQGASYN 94


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 21.0 bits (42), Expect = 5.5
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +3

Query: 105 FV*TKYLLYFDIFT*RHD 158
           F   + L+YFDIF   H+
Sbjct: 221 FTVPRVLMYFDIFITEHE 238


>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 20.2 bits (40), Expect = 9.6
 Identities = 7/26 (26%), Positives = 14/26 (53%)
 Frame = -1

Query: 130 YNKYFVQTKEACASKNLIFHQMEIKI 53
           YN+Y  + +    +  L+  + +IKI
Sbjct: 254 YNRYLTRRRRIEIAHTLVLSERQIKI 279


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 20.2 bits (40), Expect = 9.6
 Identities = 7/26 (26%), Positives = 14/26 (53%)
 Frame = -1

Query: 130 YNKYFVQTKEACASKNLIFHQMEIKI 53
           YN+Y  + +    +  L+  + +IKI
Sbjct: 254 YNRYLTRRRRIEIAHTLVLSERQIKI 279


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 20.2 bits (40), Expect = 9.6
 Identities = 7/26 (26%), Positives = 14/26 (53%)
 Frame = -1

Query: 130 YNKYFVQTKEACASKNLIFHQMEIKI 53
           YN+Y  + +    +  L+  + +IKI
Sbjct: 254 YNRYLTRRRRIEIAHTLVLSERQIKI 279


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,794
Number of Sequences: 336
Number of extensions: 1859
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10511300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)