Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10o18
         (413 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    22   2.1  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   3.6  
DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory pro...    20   8.3  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    20   8.3  

>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 22.2 bits (45), Expect = 2.1
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = -3

Query: 192 T*PST*QSYSSLVLYDPSLRTIGLK 118
           T P+    ++ L+L  P+LR+IGLK
Sbjct: 353 THPNEPGRFAKLLLRLPALRSIGLK 377


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 3.6
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = +3

Query: 171  IVMWKATLNVFGVSVTDITASTTSQKN 251
            IVM   T  +  V+V D   ST  +KN
Sbjct: 1361 IVMSSVTYGIDTVAVCDACYSTIEEKN 1387



 Score = 20.2 bits (40), Expect = 8.3
 Identities = 6/18 (33%), Positives = 11/18 (61%)
 Frame = -1

Query: 278  LCYDYFSHCVFL*SCRCC 225
            +C++   +CV+L  C  C
Sbjct: 1123 ICWNVLLNCVYLFLCGFC 1140


>DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory
           protein 11 protein.
          Length = 127

 Score = 20.2 bits (40), Expect = 8.3
 Identities = 7/28 (25%), Positives = 16/28 (57%)
 Frame = +3

Query: 216 TDITASTTSQKNAMRKVVITKEPRKQEW 299
           T+ +  + +QKN  +K++      K++W
Sbjct: 73  TECSKCSETQKNGSKKIMRHLIDHKRDW 100


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 20.2 bits (40), Expect = 8.3
 Identities = 11/32 (34%), Positives = 15/32 (46%)
 Frame = -2

Query: 106 LRFCEHD*KKYFKIA*STYNLD*HFPVYFSIL 11
           LR  E D  K   +   T NLD   P+Y  ++
Sbjct: 191 LRIIEADFSKLNHLLSGTENLDLVLPIYSQLV 222


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,964
Number of Sequences: 336
Number of extensions: 1637
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  9068614
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)