Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte10o18
(413 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ243182-1|CAB45863.1| 2857|Caenorhabditis elegans inositol 1,4,... 31 0.44
AJ243181-1|CAB45862.1| 2836|Caenorhabditis elegans inositol 1,4,... 31 0.44
AJ243180-1|CAB45861.1| 2892|Caenorhabditis elegans inositol 1,4,... 31 0.44
AJ243179-1|CAB45860.1| 2846|Caenorhabditis elegans inositol 1,4,... 31 0.44
AF168688-1|AAF05302.1| 2846|Caenorhabditis elegans inositol 1,4,... 31 0.44
AF036702-4|AAK68365.1| 2857|Caenorhabditis elegans Inositol trip... 31 0.44
AF036702-3|AAK68366.1| 2846|Caenorhabditis elegans Inositol trip... 31 0.44
AF036702-2|AAW30669.1| 2836|Caenorhabditis elegans Inositol trip... 31 0.44
AF036702-1|AAW30668.1| 2892|Caenorhabditis elegans Inositol trip... 31 0.44
AF162674-1|AAF80462.1| 575|Caenorhabditis elegans CNT-like nucl... 27 4.1
AF016413-4|AAM29683.1| 454|Caenorhabditis elegans Hypothetical ... 27 4.1
AF016413-3|AAB65256.3| 555|Caenorhabditis elegans Hypothetical ... 27 4.1
Z75552-6|CAA99939.1| 332|Caenorhabditis elegans Hypothetical pr... 27 5.4
Z99281-50|CAD56259.3| 837|Caenorhabditis elegans Hypothetical p... 27 7.1
Z82267-4|CAB05192.1| 285|Caenorhabditis elegans Hypothetical pr... 26 9.4
>AJ243182-1|CAB45863.1| 2857|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2857
Score = 30.7 bits (66), Expect = 0.44
Identities = 12/33 (36%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = +2
Query: 179 VEGYVKCFWSLCDRHNSI-DNFTEKRNEKSSHN 274
VE ++ LC+ HNS+ NF K++++++HN
Sbjct: 2039 VEPILRVLQLLCENHNSLLQNFLRKQSDRTNHN 2071
>AJ243181-1|CAB45862.1| 2836|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2836
Score = 30.7 bits (66), Expect = 0.44
Identities = 12/33 (36%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = +2
Query: 179 VEGYVKCFWSLCDRHNSI-DNFTEKRNEKSSHN 274
VE ++ LC+ HNS+ NF K++++++HN
Sbjct: 2018 VEPILRVLQLLCENHNSLLQNFLRKQSDRTNHN 2050
>AJ243180-1|CAB45861.1| 2892|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2892
Score = 30.7 bits (66), Expect = 0.44
Identities = 12/33 (36%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = +2
Query: 179 VEGYVKCFWSLCDRHNSI-DNFTEKRNEKSSHN 274
VE ++ LC+ HNS+ NF K++++++HN
Sbjct: 2074 VEPILRVLQLLCENHNSLLQNFLRKQSDRTNHN 2106
>AJ243179-1|CAB45860.1| 2846|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2846
Score = 30.7 bits (66), Expect = 0.44
Identities = 12/33 (36%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = +2
Query: 179 VEGYVKCFWSLCDRHNSI-DNFTEKRNEKSSHN 274
VE ++ LC+ HNS+ NF K++++++HN
Sbjct: 2028 VEPILRVLQLLCENHNSLLQNFLRKQSDRTNHN 2060
>AF168688-1|AAF05302.1| 2846|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2846
Score = 30.7 bits (66), Expect = 0.44
Identities = 12/33 (36%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = +2
Query: 179 VEGYVKCFWSLCDRHNSI-DNFTEKRNEKSSHN 274
VE ++ LC+ HNS+ NF K++++++HN
Sbjct: 2028 VEPILRVLQLLCENHNSLLQNFLRKQSDRTNHN 2060
>AF036702-4|AAK68365.1| 2857|Caenorhabditis elegans Inositol
triphosphate receptorprotein 1, isoform e protein.
Length = 2857
Score = 30.7 bits (66), Expect = 0.44
Identities = 12/33 (36%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = +2
Query: 179 VEGYVKCFWSLCDRHNSI-DNFTEKRNEKSSHN 274
VE ++ LC+ HNS+ NF K++++++HN
Sbjct: 2039 VEPILRVLQLLCENHNSLLQNFLRKQSDRTNHN 2071
>AF036702-3|AAK68366.1| 2846|Caenorhabditis elegans Inositol
triphosphate receptorprotein 1, isoform f protein.
Length = 2846
Score = 30.7 bits (66), Expect = 0.44
Identities = 12/33 (36%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = +2
Query: 179 VEGYVKCFWSLCDRHNSI-DNFTEKRNEKSSHN 274
VE ++ LC+ HNS+ NF K++++++HN
Sbjct: 2028 VEPILRVLQLLCENHNSLLQNFLRKQSDRTNHN 2060
>AF036702-2|AAW30669.1| 2836|Caenorhabditis elegans Inositol
triphosphate receptorprotein 1, isoform d protein.
Length = 2836
Score = 30.7 bits (66), Expect = 0.44
Identities = 12/33 (36%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = +2
Query: 179 VEGYVKCFWSLCDRHNSI-DNFTEKRNEKSSHN 274
VE ++ LC+ HNS+ NF K++++++HN
Sbjct: 2018 VEPILRVLQLLCENHNSLLQNFLRKQSDRTNHN 2050
>AF036702-1|AAW30668.1| 2892|Caenorhabditis elegans Inositol
triphosphate receptorprotein 1, isoform a protein.
Length = 2892
Score = 30.7 bits (66), Expect = 0.44
Identities = 12/33 (36%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = +2
Query: 179 VEGYVKCFWSLCDRHNSI-DNFTEKRNEKSSHN 274
VE ++ LC+ HNS+ NF K++++++HN
Sbjct: 2074 VEPILRVLQLLCENHNSLLQNFLRKQSDRTNHN 2106
>AF162674-1|AAF80462.1| 575|Caenorhabditis elegans CNT-like
nucleoside transporter protein.
Length = 575
Score = 27.5 bits (58), Expect = 4.1
Identities = 15/55 (27%), Positives = 27/55 (49%)
Frame = -2
Query: 259 LIAFFCEVVDAVMSVTETPKTFNVAFHITIVFVFSSIRPKSTNYRFKVVITLRFC 95
L+AF ++D++ +T F F+I +FVFS+ R K + + +C
Sbjct: 132 LLAF--TIIDSIHDLTRLTGFFAYVFYILFMFVFSNNRMKINWSVVSSALIMHYC 184
>AF016413-4|AAM29683.1| 454|Caenorhabditis elegans Hypothetical
protein F27E11.2b protein.
Length = 454
Score = 27.5 bits (58), Expect = 4.1
Identities = 15/55 (27%), Positives = 27/55 (49%)
Frame = -2
Query: 259 LIAFFCEVVDAVMSVTETPKTFNVAFHITIVFVFSSIRPKSTNYRFKVVITLRFC 95
L+AF ++D++ +T F F+I +FVFS+ R K + + +C
Sbjct: 132 LLAF--TIIDSIHDLTRLTGFFAYVFYILFMFVFSNNRMKINWSVVSSALIMHYC 184
>AF016413-3|AAB65256.3| 555|Caenorhabditis elegans Hypothetical
protein F27E11.2a protein.
Length = 555
Score = 27.5 bits (58), Expect = 4.1
Identities = 15/55 (27%), Positives = 27/55 (49%)
Frame = -2
Query: 259 LIAFFCEVVDAVMSVTETPKTFNVAFHITIVFVFSSIRPKSTNYRFKVVITLRFC 95
L+AF ++D++ +T F F+I +FVFS+ R K + + +C
Sbjct: 132 LLAF--TIIDSIHDLTRLTGFFAYVFYILFMFVFSNNRMKINWSVVSSALIMHYC 184
>Z75552-6|CAA99939.1| 332|Caenorhabditis elegans Hypothetical
protein W04D2.2a protein.
Length = 332
Score = 27.1 bits (57), Expect = 5.4
Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 2/72 (2%)
Frame = -2
Query: 370 TVFYSVVHSYSKNIILKSLCVLQGHSCFRGSFVMTTFLIAF--FCEVVDAVMSVTETPKT 197
T F V+ S KN+ K+ Q + F+ +T + A C V+ VM+VTE P
Sbjct: 211 TPFRWVIGSNLKNV--KNANASQLQNTKTQVFLQSTLICAANQVCAVIYVVMNVTEVPNW 268
Query: 196 FNVAFHITIVFV 161
+ H T F+
Sbjct: 269 LIMFAHFTWEFI 280
>Z99281-50|CAD56259.3| 837|Caenorhabditis elegans Hypothetical
protein Y57G11C.37 protein.
Length = 837
Score = 26.6 bits (56), Expect = 7.1
Identities = 14/47 (29%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Frame = +2
Query: 47 IISTLCNFKILF--LIMFTKSQCNHYFKPIVRRLGSYRTKDEYDCYV 181
++S LC F ++F L++ + I+ L +YRT DEY+ ++
Sbjct: 389 MLSWLCYFPMIFYALMIVISDKIYRRLALILNDLENYRTDDEYEDFL 435
>Z82267-4|CAB05192.1| 285|Caenorhabditis elegans Hypothetical
protein F38C2.6 protein.
Length = 285
Score = 26.2 bits (55), Expect = 9.4
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = -2
Query: 367 VFYSVVHSYSKNIILKSLCVLQGHSCFRGSFVMTTFLIAFF 245
+FY + ++K I S+ V SC + F +TF++AF+
Sbjct: 25 LFYGKIVKFNKEAI--SITVTDLDSCVQNCFEESTFILAFW 63
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,462,286
Number of Sequences: 27780
Number of extensions: 160115
Number of successful extensions: 496
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 494
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 496
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 673122114
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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