Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte10o18
(413 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g44770.1 68418.m05487 DC1 domain-containing protein contains ... 29 1.6
At3g61030.1 68416.m06828 C2 domain-containing protein similar to... 27 3.8
At3g60950.1 68416.m06819 C2 domain-containing protein similar to... 27 3.8
At3g27540.1 68416.m03442 glycosyl transferase family 17 protein ... 27 3.8
At3g25510.1 68416.m03172 disease resistance protein (TIR-NBS-LRR... 27 5.0
At1g66930.1 68414.m07606 serine/threonine protein kinase family ... 27 5.0
At5g23690.1 68418.m02777 polynucleotide adenylyltransferase fami... 27 6.6
At4g18430.1 68417.m02735 Ras-related GTP-binding protein, putati... 27 6.6
At2g04690.1 68415.m00479 cellular repressor of E1A-stimulated ge... 26 8.7
At1g12370.2 68414.m01430 type II CPD photolyase PHR1 (PHR1) near... 26 8.7
At1g12370.1 68414.m01429 type II CPD photolyase PHR1 (PHR1) near... 26 8.7
>At5g44770.1 68418.m05487 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 541
Score = 28.7 bits (61), Expect = 1.6
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Frame = +2
Query: 101 SQCNHYFKPIVRRLGSYRTKDEYDC-YVEGYVKCFWSLCDRHN-SID 235
S+CNH K R G + D+Y C Y + V ++ C N SID
Sbjct: 58 SRCNHSLKIFQGRFGQFGEDDDYQCHYCQQNVGFHFARCTICNISID 104
>At3g61030.1 68416.m06828 C2 domain-containing protein similar to
CLB1 [Lycopersicon esculentum] GI:2789434; contains Pfam
profile PF00168: C2 domain
Length = 592
Score = 27.5 bits (58), Expect = 3.8
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +3
Query: 177 MWKATLNVFGVSVTDITASTTSQKNAMRKVVITKEPRKQEW 299
+W A L +G+ + +++KN KVV +K+ K EW
Sbjct: 449 IWTAILPAYGIENREKRVKQSTEKNLKAKVVSSKDISK-EW 488
>At3g60950.1 68416.m06819 C2 domain-containing protein similar to
CLB1 [Lycopersicon esculentum] GI:2789434; contains Pfam
profile PF00168: C2 domain
Length = 592
Score = 27.5 bits (58), Expect = 3.8
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +3
Query: 177 MWKATLNVFGVSVTDITASTTSQKNAMRKVVITKEPRKQEW 299
+W A L +G+ + +++KN KVV +K+ K EW
Sbjct: 449 IWTAILPAYGIENREKRVKQSTEKNLKAKVVSSKDISK-EW 488
>At3g27540.1 68416.m03442 glycosyl transferase family 17 protein low
similarity to beta-1,4-mannosyl-glycoprotein
beta-1,4-N-acetylglucosaminyltransferase (EC 2.4.1.144)
from Mus musculus [SP|Q10470], Rattus norvegicus
[SP|Q02527], Homo sapiens [SP|Q09327] ; contains Pfam
profile PF04724 :Glycosyltransferase family 17
Length = 390
Score = 27.5 bits (58), Expect = 3.8
Identities = 9/22 (40%), Positives = 16/22 (72%)
Frame = -2
Query: 364 FYSVVHSYSKNIILKSLCVLQG 299
F ++ H Y++N+ ++SLC L G
Sbjct: 80 FQTIPHYYNENVTMESLCSLHG 101
>At3g25510.1 68416.m03172 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1981
Score = 27.1 bits (57), Expect = 5.0
Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Frame = -2
Query: 316 LCVLQGHSCFRGSFVMTTFLIAFFCEVVDAVMSVTETPKTF-NVAFHITIVFVFSSIRPK 140
L +L CF+ + F+I DAV+ E P F + A + + + RP
Sbjct: 1128 LSLLNFAKCFKLNQEARDFIIQIPTSN-DAVLPGAEVPAYFTHRATTGASLTIKLNERPI 1186
Query: 139 STNYRFKVVITLRFCEHD 86
ST+ RFK I L C++D
Sbjct: 1187 STSMRFKACIVLIKCDND 1204
>At1g66930.1 68414.m07606 serine/threonine protein kinase family
protein contains Pfam PF00069: Protein kinase domain
Length = 674
Score = 27.1 bits (57), Expect = 5.0
Identities = 15/54 (27%), Positives = 28/54 (51%)
Frame = -2
Query: 271 MTTFLIAFFCEVVDAVMSVTETPKTFNVAFHITIVFVFSSIRPKSTNYRFKVVI 110
++ F +A CE ++VMS+ +T T I V+ S+ KS Y + +++
Sbjct: 486 VSDFGLAKLCEKKESVMSLMDTRGTIGYIAPEMISRVYGSVSHKSDVYSYGMLV 539
>At5g23690.1 68418.m02777 polynucleotide adenylyltransferase family
protein low similarity to SP|P13685 Poly(A) polymerase
(EC 2.7.7.19) {Escherichia coli O157:H7}; contains Pfam
profile PF01743: polyA polymerase family protein
Length = 527
Score = 26.6 bits (56), Expect = 6.6
Identities = 11/48 (22%), Positives = 22/48 (45%)
Frame = +3
Query: 177 MWKATLNVFGVSVTDITASTTSQKNAMRKVVITKEPRKQEWPCKTHRD 320
+WK N ++ + S ++ R+ ++ EPR +EW +D
Sbjct: 24 LWKIRFNTVAAAIETMDESDGFATDSDRQDKVSDEPRDREWKQLNSKD 71
>At4g18430.1 68417.m02735 Ras-related GTP-binding protein, putative
similar to GTP-binding protein GI:303742 from [Pisum
sativum]
Length = 217
Score = 26.6 bits (56), Expect = 6.6
Identities = 19/57 (33%), Positives = 28/57 (49%)
Frame = +2
Query: 140 LGSYRTKDEYDCYVEGYVKCFWSLCDRHNSIDNFTEKRNEKSSHNKGTSEARMALQN 310
+G+YR D+YD Y+ V S + N + FT RNE S +K T A ++
Sbjct: 1 MGAYRADDDYD-YLFKLVLIGDSGVGKSNLLSRFT--RNEFSIESKSTIGVEFATRS 54
>At2g04690.1 68415.m00479 cellular repressor of E1A-stimulated genes
(CREG) family contains 1 transmembrane domain; similar
to CREG2 (GI:24371079) [Homo sapiens] and (GI:24371081)
[Mus musculus]; similar to cellular repressor of
E1A-stimulated genes CREG (GI:3550343) [Homo sapiens]
Length = 210
Score = 26.2 bits (55), Expect = 8.7
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +3
Query: 237 TSQKNAMRKVVITKEPRKQEWPCKTHRDFKIIFLE 341
+ + +K + TK P +WP K H DF+ LE
Sbjct: 145 SEEAEVAKKALFTKHPEMMDWP-KDH-DFRFFKLE 177
>At1g12370.2 68414.m01430 type II CPD photolyase PHR1 (PHR1) nearly
identical to type II CPD photolyase PHR1 [Arabidopsis
thaliana] GI:2984707; similar to class II DNA photolyase
(GI:5081541) [Chlamydomonas reinhardtii]; supporting
cDNA gi|2984706|gb|AF053365.1|AF053365
Length = 496
Score = 26.2 bits (55), Expect = 8.7
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = +2
Query: 185 GYVKCFWSLCDRHN 226
GYV C WS+C H+
Sbjct: 421 GYVGCMWSICGVHD 434
>At1g12370.1 68414.m01429 type II CPD photolyase PHR1 (PHR1) nearly
identical to type II CPD photolyase PHR1 [Arabidopsis
thaliana] GI:2984707; similar to class II DNA photolyase
(GI:5081541) [Chlamydomonas reinhardtii]; supporting
cDNA gi|2984706|gb|AF053365.1|AF053365
Length = 490
Score = 26.2 bits (55), Expect = 8.7
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = +2
Query: 185 GYVKCFWSLCDRHN 226
GYV C WS+C H+
Sbjct: 415 GYVGCMWSICGVHD 428
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,648,625
Number of Sequences: 28952
Number of extensions: 137457
Number of successful extensions: 385
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 380
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 385
length of database: 12,070,560
effective HSP length: 74
effective length of database: 9,928,112
effective search space used: 625471056
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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