Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte10o16
(717 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_27134| Best HMM Match : No HMM Matches (HMM E-Value=.) 66 3e-11
SB_21296| Best HMM Match : No HMM Matches (HMM E-Value=.) 65 5e-11
SB_27133| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 1e-10
SB_29575| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 3e-08
SB_46661| Best HMM Match : Ferritin (HMM E-Value=0.18) 40 0.002
SB_7534| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.008
SB_7503| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.40
SB_25562| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_28001| Best HMM Match : Zip (HMM E-Value=3e-18) 29 5.0
SB_13631| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.0
SB_58496| Best HMM Match : Ferritin (HMM E-Value=0.0012) 28 8.7
>SB_27134| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 289
Score = 66.1 bits (154), Expect = 3e-11
Identities = 42/140 (30%), Positives = 70/140 (50%)
Frame = +1
Query: 190 INRQIQTEQQVAQHYLSLAVTFLNVKSLYHGAGGFFMKMYFEELDHMQGFIKYQLIRGNI 369
+N+QI E + Y+S+A F G +FMK EE +H + K+QL RG
Sbjct: 135 VNKQINLELYASYVYMSMAYHFDRDDVALPGFHKYFMKASHEEREHAEKLAKFQLQRGGR 194
Query: 370 PNICGIEKPNLPDNLPLIEAFRYSLKMEEQVNQLLEEIVTEANDIKDYHCADFVTSVYLS 549
+ I++P D +A + +L +E+ VNQ L ++ A D D++ S YL+
Sbjct: 195 IVLQDIKRPERDDWGCGQDAIQAALDLEKHVNQALLDLHKVAEKHGDSQMQDWLESHYLT 254
Query: 550 EQIQSINEINHYIIKLSSFG 609
EQ+++I E+ ++ L G
Sbjct: 255 EQVEAIKELAGHLTNLKRVG 274
>SB_21296| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 358
Score = 65.3 bits (152), Expect = 5e-11
Identities = 42/149 (28%), Positives = 73/149 (48%)
Frame = +1
Query: 163 HTACKIADLINRQIQTEQQVAQHYLSLAVTFLNVKSLYHGAGGFFMKMYFEELDHMQGFI 342
H C+ IN+QI E + YLS+A F G +F+K EE +H + +
Sbjct: 196 HEECEAG--INKQINLELYASYAYLSMAFHFDRDDVALPGFHKYFLKASHEEREHAEKLM 253
Query: 343 KYQLIRGNIPNICGIEKPNLPDNLPLIEAFRYSLKMEEQVNQLLEEIVTEANDIKDYHCA 522
K+Q RG + I+KP + +++ + +L +E+ VNQ L ++ A D
Sbjct: 254 KFQNERGGRIVLQDIKKPEKDEWGCGMDSIQVALDLEKHVNQALLDLHKIAEKHGDAQMT 313
Query: 523 DFVTSVYLSEQIQSINEINHYIIKLSSFG 609
DF+ +L+EQ+++I E+ ++ L G
Sbjct: 314 DFIEGNFLTEQVEAIKELAGHLTNLKRVG 342
Score = 49.2 bits (112), Expect = 3e-06
Identities = 32/110 (29%), Positives = 52/110 (47%)
Frame = +1
Query: 280 GAGGFFMKMYFEELDHMQGFIKYQLIRGNIPNICGIEKPNLPDNLPLIEAFRYSLKMEEQ 459
G FF K EE H F+++ RG + I KP + A R +L +E++
Sbjct: 13 GFAAFFKKAAEEEYTHAHMFMEFLNKRGGRVKLHHIMKPCRDHWGNGLMAMRDALYLEKE 72
Query: 460 VNQLLEEIVTEANDIKDYHCADFVTSVYLSEQIQSINEINHYIIKLSSFG 609
+N L ++ A+ +D DF+ S +L EQ+ SI + +Y+ L G
Sbjct: 73 INHALLDLHQVADTNRDPQVQDFLESNFLGEQVDSIKTLANYVSTLQRLG 122
>SB_27133| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 304
Score = 63.7 bits (148), Expect = 1e-10
Identities = 40/140 (28%), Positives = 69/140 (49%)
Frame = +1
Query: 190 INRQIQTEQQVAQHYLSLAVTFLNVKSLYHGAGGFFMKMYFEELDHMQGFIKYQLIRGNI 369
+N+QI E + Y+S+A F G +FM+ EE +H + K+QL RG
Sbjct: 150 VNKQINLELYASYVYMSMAFHFDRDDVALPGFHKYFMEASHEEREHAEKLAKFQLQRGGR 209
Query: 370 PNICGIEKPNLPDNLPLIEAFRYSLKMEEQVNQLLEEIVTEANDIKDYHCADFVTSVYLS 549
+ I++P D + + +L +E+ VNQ L ++ A D D++ S YL+
Sbjct: 210 IVLQDIKRPERDDWGCGQDVIQAALDLEKHVNQALHDLHKVAEKHGDSQMQDWLESHYLT 269
Query: 550 EQIQSINEINHYIIKLSSFG 609
EQ+++I E+ ++ L G
Sbjct: 270 EQVEAIKELAGHMTNLKRVG 289
>SB_29575| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 394
Score = 56.0 bits (129), Expect = 3e-08
Identities = 35/115 (30%), Positives = 59/115 (51%), Gaps = 1/115 (0%)
Frame = +1
Query: 298 MKMYFEELD-HMQGFIKYQLIRGNIPNICGIEKPNLPDNLPLIEAFRYSLKMEEQVNQLL 474
M YF+ D H+ GF K+ + + +KP + +EA + +L +E+ VNQ L
Sbjct: 33 MACYFDREDVHLPGFHKFFKKQAHEEREHAEKKPERDEWGSGLEAMQTALDLEKHVNQAL 92
Query: 475 EEIVTEANDIKDYHCADFVTSVYLSEQIQSINEINHYIIKLSSFGDDIHAIHNFD 639
E+ A D +DF+ +L+EQ++SI E++ YI L G + ++ FD
Sbjct: 93 IELEKTAEKNGDAQMSDFIEDHFLTEQVESIRELSGYIAVLKKVGPGL-GVYQFD 146
>SB_46661| Best HMM Match : Ferritin (HMM E-Value=0.18)
Length = 88
Score = 40.3 bits (90), Expect = 0.002
Identities = 18/76 (23%), Positives = 40/76 (52%)
Frame = +1
Query: 427 AFRYSLKMEEQVNQLLEEIVTEANDIKDYHCADFVTSVYLSEQIQSINEINHYIIKLSSF 606
A +L +E+++ L+ + +A + D DF+ +L+EQ+ SI ++++Y+ L
Sbjct: 13 AMEDALALEKEILSSLQALHRKAQEENDAQMQDFIEETFLNEQMDSIKQLSNYVSTLRRL 72
Query: 607 GDDIHAIHNFDTSLIK 654
G + + FD ++
Sbjct: 73 GGEGLGEYQFDKETLQ 88
>SB_7534| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 135
Score = 37.9 bits (84), Expect = 0.008
Identities = 22/73 (30%), Positives = 35/73 (47%)
Frame = +1
Query: 190 INRQIQTEQQVAQHYLSLAVTFLNVKSLYHGAGGFFMKMYFEELDHMQGFIKYQLIRGNI 369
+N+QI E + Y+S+A F G +F+K EE +H + K+QL RG
Sbjct: 18 VNKQINLELYASYVYMSMAFHFDRDDVALPGFHKYFIKASHEEREHAEKLAKFQLQRGGR 77
Query: 370 PNICGIEKPNLPD 408
+ I++P D
Sbjct: 78 IVLQDIKRPERDD 90
>SB_7503| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 203
Score = 32.3 bits (70), Expect = 0.40
Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Frame = +1
Query: 478 EIVTEANDIKDY---HCADFVTSVYLSEQIQSINEINHYIIKLSSFGDDIHAIHNFDTSL 648
+IVT I Y DF+ +L+EQ+ SI ++++Y+ L G + + FD
Sbjct: 142 QIVTMCAQIPRYPSLQMQDFIEETFLNEQMDSIKQLSNYVSTLRRLGGEGLGEYQFDKET 201
Query: 649 IK 654
++
Sbjct: 202 LQ 203
>SB_25562| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 564
Score = 29.1 bits (62), Expect = 3.8
Identities = 17/38 (44%), Positives = 20/38 (52%)
Frame = +1
Query: 388 EKPNLPDNLPLIEAFRYSLKMEEQVNQLLEEIVTEAND 501
E P LP+N PL E SLK Q NQ L ++ A D
Sbjct: 82 EPPYLPNNRPLAERRLCSLKKRFQANQELFDMYMTAVD 119
>SB_28001| Best HMM Match : Zip (HMM E-Value=3e-18)
Length = 656
Score = 28.7 bits (61), Expect = 5.0
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = -2
Query: 707 KFYSFVLYKFKRLLKGNSLIKLVSKLWIACISSPNDE 597
KF+ LYK K+ L + L K+ KL IA + P+ E
Sbjct: 236 KFFLDELYKNKQYLDEDDLSKITKKLGIAINAKPSSE 272
>SB_13631| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 89
Score = 28.7 bits (61), Expect = 5.0
Identities = 15/55 (27%), Positives = 26/55 (47%)
Frame = +1
Query: 106 KVKFYPQKIIIYNYSNVKKHTACKIADLINRQIQTEQQVAQHYLSLAVTFLNVKS 270
K K ++I+I SN K +D +NRQ+Q + + L++ +N S
Sbjct: 27 KTKAEIERIVILGISNSPKSVVLTSSDTVNRQLQFTHDKSAYTLTIKKPAVNAAS 81
>SB_58496| Best HMM Match : Ferritin (HMM E-Value=0.0012)
Length = 126
Score = 27.9 bits (59), Expect = 8.7
Identities = 18/48 (37%), Positives = 21/48 (43%)
Frame = +1
Query: 190 INRQIQTEQQVAQHYLSLAVTFLNVKSLYHGAGGFFMKMYFEELDHMQ 333
IN+QI E YLS+A F G FF K EE +H Q
Sbjct: 38 INKQINKELYAHYTYLSMAFHFDRDDINLPGFNKFFKKASKEEWEHAQ 85
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,707,777
Number of Sequences: 59808
Number of extensions: 323926
Number of successful extensions: 644
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 618
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 641
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1901817086
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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