Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10o16
         (717 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh...    28   0.33 
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    27   0.77 
AY341201-1|AAR13765.1|  154|Anopheles gambiae NOS protein.             23   9.5  
AY341200-1|AAR13764.1|  154|Anopheles gambiae NOS protein.             23   9.5  
AY341199-1|AAR13763.1|  154|Anopheles gambiae NOS protein.             23   9.5  
AY341198-1|AAR13762.1|  154|Anopheles gambiae NOS protein.             23   9.5  
AY341197-1|AAR13761.1|  154|Anopheles gambiae NOS protein.             23   9.5  
AY341196-1|AAR13760.1|  154|Anopheles gambiae NOS protein.             23   9.5  

>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative
           cell-adhesion protein protein.
          Length = 1881

 Score = 27.9 bits (59), Expect = 0.33
 Identities = 15/48 (31%), Positives = 23/48 (47%)
 Frame = +1

Query: 358 RGNIPNICGIEKPNLPDNLPLIEAFRYSLKMEEQVNQLLEEIVTEAND 501
           R  +P I  +   N  DN P+    RY ++++E   +    IV EA D
Sbjct: 606 RNTVPLILNVLDVN--DNAPVFVQKRYEVRLKENAFEFESPIVVEARD 651


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 26.6 bits (56), Expect = 0.77
 Identities = 14/64 (21%), Positives = 29/64 (45%)
 Frame = +1

Query: 79  TVSNKLKLIKVKFYPQKIIIYNYSNVKKHTACKIADLINRQIQTEQQVAQHYLSLAVTFL 258
           T   K+ L+K+    +++   N    +KH  CK+A+   + ++  +  A  YL    T  
Sbjct: 248 TTRYKVPLLKIN---ERVDALNEERTEKHNRCKLAEREMKDLEKPKTEAVEYLKQENTLT 304

Query: 259 NVKS 270
             ++
Sbjct: 305 RTRN 308


>AY341201-1|AAR13765.1|  154|Anopheles gambiae NOS protein.
          Length = 154

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = +3

Query: 333 RFYKISVNQRKYTK 374
           RFY IS + RKY+K
Sbjct: 133 RFYSISSSPRKYSK 146


>AY341200-1|AAR13764.1|  154|Anopheles gambiae NOS protein.
          Length = 154

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = +3

Query: 333 RFYKISVNQRKYTK 374
           RFY IS + RKY+K
Sbjct: 133 RFYSISSSPRKYSK 146


>AY341199-1|AAR13763.1|  154|Anopheles gambiae NOS protein.
          Length = 154

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = +3

Query: 333 RFYKISVNQRKYTK 374
           RFY IS + RKY+K
Sbjct: 133 RFYSISSSPRKYSK 146


>AY341198-1|AAR13762.1|  154|Anopheles gambiae NOS protein.
          Length = 154

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = +3

Query: 333 RFYKISVNQRKYTK 374
           RFY IS + RKY+K
Sbjct: 133 RFYSISSSPRKYSK 146


>AY341197-1|AAR13761.1|  154|Anopheles gambiae NOS protein.
          Length = 154

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = +3

Query: 333 RFYKISVNQRKYTK 374
           RFY IS + RKY+K
Sbjct: 133 RFYSISSSPRKYSK 146


>AY341196-1|AAR13760.1|  154|Anopheles gambiae NOS protein.
          Length = 154

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = +3

Query: 333 RFYKISVNQRKYTK 374
           RFY IS + RKY+K
Sbjct: 133 RFYSISSSPRKYSK 146


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 624,126
Number of Sequences: 2352
Number of extensions: 12546
Number of successful extensions: 26
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 72765525
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)