Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte10o16
(717 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g56090.1 68416.m06234 ferritin, putative similar to ferritin ... 69 3e-12
At5g01600.1 68418.m00075 ferritin 1 (FER1) identical to ferritin... 69 4e-12
At2g40300.1 68415.m04964 ferritin, putative similar to ferritin ... 66 3e-11
At3g11050.1 68416.m01333 ferritin, putative similar to ferritin ... 61 6e-10
At1g21810.1 68414.m02729 expressed protein 30 1.3
At3g03200.1 68416.m00316 no apical meristem (NAM) family protein... 29 3.1
At5g55230.1 68418.m06884 microtubule associated protein (MAP65/A... 29 4.1
At1g02050.1 68414.m00125 chalcone and stilbene synthase family p... 28 5.4
At5g16730.1 68418.m01959 expressed protein weak similarity to mi... 28 7.1
At5g28040.1 68418.m03378 expressed protein contains Pfam profil... 27 9.4
At5g24030.1 68418.m02823 C4-dicarboxylate transporter/malic acid... 27 9.4
>At3g56090.1 68416.m06234 ferritin, putative similar to ferritin
subunit cowpea2 precursor [Vigna unguiculata]
GI:2970654; contains Pfam profile PF00210: Ferritin-like
domain
Length = 259
Score = 68.9 bits (161), Expect = 3e-12
Identities = 45/158 (28%), Positives = 76/158 (48%), Gaps = 4/158 (2%)
Frame = +1
Query: 190 INRQIQTEQQVAQHYLSLAVTFLNVKSLYHGAGGFFMKMYFEELDHMQGFIKYQLIRGNI 369
+N QI E V+ Y +L F G FF + EE +H + ++YQ RG
Sbjct: 99 VNEQINVEYNVSYVYHALYAYFDRDNVALKGLAKFFKESSVEEREHAELLMEYQNKRGGR 158
Query: 370 PNICGIEKPNL----PDNLPLIEAFRYSLKMEEQVNQLLEEIVTEANDIKDYHCADFVTS 537
+ + P P+ + A +L +E+ VN+ L + + A+ D ADF+ S
Sbjct: 159 VKLQPMVLPQSEFDHPEKGDALYAMELALSLEKLVNEKLLNLHSVASKNDDVQLADFIES 218
Query: 538 VYLSEQIQSINEINHYIIKLSSFGDDIHAIHNFDTSLI 651
V+L+EQ+++I +I+ Y+ +L G H +FD L+
Sbjct: 219 VFLNEQVEAIKKISEYVSQLRRLGKG-HGTWHFDQELL 255
>At5g01600.1 68418.m00075 ferritin 1 (FER1) identical to ferritin
[Arabidopsis thaliana] GI:1246401, GI:8163920
Length = 255
Score = 68.5 bits (160), Expect = 4e-12
Identities = 48/159 (30%), Positives = 75/159 (47%), Gaps = 4/159 (2%)
Frame = +1
Query: 187 LINRQIQTEQQVAQHYLSLAVTFLNVKSLYHGAGGFFMKMYFEELDHMQGFIKYQLIRGN 366
+IN QI E V+ Y S+ F G FF + EE H + F++YQ RG
Sbjct: 97 VINEQINVEYNVSYVYHSMYAYFDRDNVAMKGLAKFFKESSEEERGHAEKFMEYQNQRGG 156
Query: 367 I----PNICGIEKPNLPDNLPLIEAFRYSLKMEEQVNQLLEEIVTEANDIKDYHCADFVT 534
P + I + + + A +L +E+ N+ L + A++ D ADFV
Sbjct: 157 RVKLHPIVSPISEFEHAEKGDALYAMELALSLEKLTNEKLLNVHKVASENNDPQLADFVE 216
Query: 535 SVYLSEQIQSINEINHYIIKLSSFGDDIHAIHNFDTSLI 651
S +L EQI++I +I+ YI +L G H + +FD L+
Sbjct: 217 SEFLGEQIEAIKKISDYITQLRMIGKG-HGVWHFDQMLL 254
>At2g40300.1 68415.m04964 ferritin, putative similar to ferritin
subunit cowpea2 precursor [Vigna unguiculata]
GI:2970654; contains Pfam profile PF00210: Ferritin-like
domain
Length = 259
Score = 65.7 bits (153), Expect = 3e-11
Identities = 44/159 (27%), Positives = 74/159 (46%), Gaps = 4/159 (2%)
Frame = +1
Query: 190 INRQIQTEQQVAQHYLSLAVTFLNVKSLYHGAGGFFMKMYFEELDHMQGFIKYQLIRGNI 369
IN QI E V+ Y ++ F G FF + EE +H + ++YQ RG
Sbjct: 101 INEQINVEYNVSYVYHAMYAYFDRDNIALKGLAKFFKESSLEEREHAEKLMEYQNKRGGR 160
Query: 370 PNICGIEKP----NLPDNLPLIEAFRYSLKMEEQVNQLLEEIVTEANDIKDYHCADFVTS 537
+ I P D + +L +E+ VN+ L + + A+ D H ADF+ S
Sbjct: 161 VKLQSIVMPLSEFEHVDKGDALYGMELALSLEKLVNEKLLNLHSVASKNNDVHLADFIES 220
Query: 538 VYLSEQIQSINEINHYIIKLSSFGDDIHAIHNFDTSLIK 654
+L+EQ+++I I+ Y+ +L G H +F+ L++
Sbjct: 221 EFLTEQVEAIKLISEYVAQLRRVGKG-HGTWHFNQMLLE 258
>At3g11050.1 68416.m01333 ferritin, putative similar to ferritin
subunit cowpea2 precursor GI:2970654 (Vigna
unguiculata); contains Pfam profile PF00210:
Ferritin-like domain
Length = 253
Score = 61.3 bits (142), Expect = 6e-10
Identities = 44/158 (27%), Positives = 71/158 (44%), Gaps = 4/158 (2%)
Frame = +1
Query: 190 INRQIQTEQQVAQHYLSLAVTFLNVKSLYHGAGGFFMKMYFEELDHMQGFIKYQLIRGNI 369
IN QI E V+ Y +L F G FF EE H + F++YQ RG
Sbjct: 93 INDQINVEYNVSYVYHALYAYFDRDNVGLKGFAKFFNDSSLEERGHAEMFMEYQNKRGGR 152
Query: 370 PNICGIEKP----NLPDNLPLIEAFRYSLKMEEQVNQLLEEIVTEANDIKDYHCADFVTS 537
+ I P + + + A +L +E+ N+ L ++ + D DFV S
Sbjct: 153 VKLQSILMPVSEFDHEEKGDALHAMELALSLEKLTNEKLLKLQSVGVKNNDVQLVDFVES 212
Query: 538 VYLSEQIQSINEINHYIIKLSSFGDDIHAIHNFDTSLI 651
+L EQ+++I +I+ Y+ +L G H + +FD L+
Sbjct: 213 EFLGEQVEAIKKISEYVAQLRRIGKG-HGVWHFDQMLL 249
>At1g21810.1 68414.m02729 expressed protein
Length = 628
Score = 30.3 bits (65), Expect = 1.3
Identities = 20/70 (28%), Positives = 35/70 (50%)
Frame = +1
Query: 445 KMEEQVNQLLEEIVTEANDIKDYHCADFVTSVYLSEQIQSINEINHYIIKLSSFGDDIHA 624
K+E ++ Q E+I T A D C + S L +Q+QS+ + ++I +S +
Sbjct: 493 KVEPKIKQ--EDIATAAGKFAD--CQKTIAS--LGKQLQSLATLEEFLIDTASIPGSARS 546
Query: 625 IHNFDTSLIK 654
+HN + L K
Sbjct: 547 VHNKEALLGK 556
>At3g03200.1 68416.m00316 no apical meristem (NAM) family protein
similar to NAC2 (GI:6456751) {Arabidopsis thaliana}
Length = 479
Score = 29.1 bits (62), Expect = 3.1
Identities = 17/62 (27%), Positives = 29/62 (46%), Gaps = 3/62 (4%)
Frame = +1
Query: 334 GFIKYQLIRGNIPNIC---GIEKPNLPDNLPLIEAFRYSLKMEEQVNQLLEEIVTEANDI 504
G+IK Q IR ++ N G N DN+ + + + + E+ VNQ+ + N+
Sbjct: 325 GYIKEQKIRSSLDNTDEDPGFHGNNTNDNIDIDDFLSFDIYNEDNVNQIEDNEDVNTNET 384
Query: 505 KD 510
D
Sbjct: 385 LD 386
>At5g55230.1 68418.m06884 microtubule associated protein
(MAP65/ASE1) family protein low similarity to protein
regulating cytokinesis 1 (PRC1) [Homo sapiens]
GI:2865521; contains Pfam profile PF03999: Microtubule
associated protein (MAP65/ASE1 family)
Length = 587
Score = 28.7 bits (61), Expect = 4.1
Identities = 16/63 (25%), Positives = 32/63 (50%)
Frame = +1
Query: 355 IRGNIPNICGIEKPNLPDNLPLIEAFRYSLKMEEQVNQLLEEIVTEANDIKDYHCADFVT 534
++ I ICG L + +P+++ SLK + L+E+ E +D + +FV+
Sbjct: 128 VQSQIQKICGDIAGGLSNEVPIVDESDLSLKKLDDFQSQLQELQKEKSD-RLRKVLEFVS 186
Query: 535 SVY 543
+V+
Sbjct: 187 TVH 189
>At1g02050.1 68414.m00125 chalcone and stilbene synthase family
protein Similar to rice chalcone synthase homolog,
gp|U90341|2507617 and anther specific protein,
gp|Y14507|2326772
Length = 395
Score = 28.3 bits (60), Expect = 5.4
Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = +1
Query: 67 INRLTVSNKLKLIKVKFYPQKIIIYNYSNVKKHTACKIADLINRQIQTEQQVAQHY-LSL 243
+NRL KLKL K K + + +Y NV +T + + + +++ + AQ + L L
Sbjct: 319 LNRL--ETKLKLEKEKLESSRRALVDYGNVSSNTILYVMEYMRDELKKKGDAAQEWGLGL 376
Query: 244 A 246
A
Sbjct: 377 A 377
>At5g16730.1 68418.m01959 expressed protein weak similarity to
microtubule binding protein D-CLIP-190 [Drosophila
melanogaster] GI:2773363, SMC2-like condensin
[Arabidopsis thaliana] GI:14279543
Length = 853
Score = 27.9 bits (59), Expect = 7.1
Identities = 15/51 (29%), Positives = 25/51 (49%)
Frame = +1
Query: 421 IEAFRYSLKMEEQVNQLLEEIVTEANDIKDYHCADFVTSVYLSEQIQSINE 573
IE F+ E V EE+ E +K+ H +D V + ++++ INE
Sbjct: 158 IEKFQAVEAGIEAVQNNEEELKKELETVKNQHASDSAALVAVRQELEKINE 208
>At5g28040.1 68418.m03378 expressed protein contains Pfam profile:
PF04504 protein of unknown function, DUF573
Length = 427
Score = 27.5 bits (58), Expect = 9.4
Identities = 17/57 (29%), Positives = 30/57 (52%)
Frame = +1
Query: 313 EELDHMQGFIKYQLIRGNIPNICGIEKPNLPDNLPLIEAFRYSLKMEEQVNQLLEEI 483
+E++ ++GF+ Y I N G + PD P E + L++E NQL+E++
Sbjct: 133 DEIELLRGFLDY------ITNHRG-NSSHPPDTAPFYEQIKSKLQLEFNKNQLVEKL 182
>At5g24030.1 68418.m02823 C4-dicarboxylate transporter/malic acid
transport family protein weak similarity to SP|P25396
Tellurite resistance protein tehA. {Escherichia coli};
contains Pfam profile PF03595: C4-dicarboxylate
transporter/malic acid transport protein
Length = 635
Score = 27.5 bits (58), Expect = 9.4
Identities = 13/31 (41%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
Frame = -1
Query: 192 NQICYFTSCMFFYIAVVVYDNFLR-IKFNLN 103
+++CYF + +F Y ++ V NF R IKF+L+
Sbjct: 482 SKVCYFIA-IFLYFSLAVRINFFRGIKFSLS 511
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,694,417
Number of Sequences: 28952
Number of extensions: 235303
Number of successful extensions: 551
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 542
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 551
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1555552968
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -