SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10o15
         (751 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC129999-1|AAI30000.1|  216|Homo sapiens LOC730112 protein protein.    72   3e-12
BC132918-1|AAI32919.1|  317|Homo sapiens similar to 4931415M17 p...    63   1e-09
BC132916-1|AAI32917.1|  317|Homo sapiens similar to 4931415M17 p...    63   1e-09
AK097419-1|BAC05044.1|  271|Homo sapiens protein ( Homo sapiens ...    63   1e-09
BC021737-1|AAH21737.1|  154|Homo sapiens chromosome 10 open read...    34   0.47 
M19720-1|AAA59879.1|  364|Homo sapiens L-myc protein protein.          33   1.4  
AL033527-8|CAI19407.1|  394|Homo sapiens v-myc myelocytomatosis ...    33   1.4  
AL033527-7|CAB75682.1|  364|Homo sapiens v-myc myelocytomatosis ...    33   1.4  
U50330-1|AAA93462.1|  986|Homo sapiens procollagen C-proteinase ...    32   2.5  
BC142953-1|AAI42954.1|  986|Homo sapiens bone morphogenetic prot...    32   2.5  

>BC129999-1|AAI30000.1|  216|Homo sapiens LOC730112 protein protein.
          Length = 216

 Score = 71.7 bits (168), Expect = 3e-12
 Identities = 43/116 (37%), Positives = 55/116 (47%)
 Frame = +3

Query: 165 PHYIPGYTGHCPEYKYRIGDTYGSTTHKILLDPSVQHSERLVLSDRTADDFQIYRPAQNE 344
           PHYIPGYTGHCP  ++ +G TYG  T ++L  P       +    RT     I  P   E
Sbjct: 16  PHYIPGYTGHCPLLRFSVGQTYGQVTGQLLRGPPGLAWPPV---HRTLLP-PIRPPRSPE 71

Query: 345 IDIVNARFRNGDPVYKHPMIPGYEGFLPRLNAHFGQRYTVSATEALSEFQRLQLNQ 512
           +   +   R G       MIPGY GF+PR    F +  +    EALS+F  L   Q
Sbjct: 72  VPRESLPVRRGQERLSSSMIPGYTGFVPRAQFIFAKNCSQVWAEALSDFTHLHEKQ 127


>BC132918-1|AAI32919.1|  317|Homo sapiens similar to 4931415M17
           protein protein.
          Length = 317

 Score = 62.9 bits (146), Expect = 1e-09
 Identities = 26/52 (50%), Positives = 36/52 (69%)
 Frame = +3

Query: 162 QPHYIPGYTGHCPEYKYRIGDTYGSTTHKILLDPSVQHSERLVLSDRTADDF 317
           +PHY+PGY G  P+ +Y++G+TYG TT ++L DPSVQ S   VLS  +   F
Sbjct: 13  EPHYVPGYAGFFPQLRYQVGNTYGRTTGQLLTDPSVQKSPCSVLSPMSKPKF 64



 Score = 30.3 bits (65), Expect = 7.7
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = +3

Query: 402 IPGYEGFLPRLNAHFGQRYTVSATEALSEFQRLQ 503
           I GY GF+PR     G  Y     +A+ EF + Q
Sbjct: 216 ISGYAGFIPRFTWVMGLNYRDGVMQAMDEFDKSQ 249


>BC132916-1|AAI32917.1|  317|Homo sapiens similar to 4931415M17
           protein protein.
          Length = 317

 Score = 62.9 bits (146), Expect = 1e-09
 Identities = 26/52 (50%), Positives = 36/52 (69%)
 Frame = +3

Query: 162 QPHYIPGYTGHCPEYKYRIGDTYGSTTHKILLDPSVQHSERLVLSDRTADDF 317
           +PHY+PGY G  P+ +Y++G+TYG TT ++L DPSVQ S   VLS  +   F
Sbjct: 13  EPHYVPGYAGFFPQLRYQVGNTYGRTTGQLLTDPSVQKSPCSVLSPMSKPKF 64



 Score = 30.3 bits (65), Expect = 7.7
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = +3

Query: 402 IPGYEGFLPRLNAHFGQRYTVSATEALSEFQRLQ 503
           I GY GF+PR     G  Y     +A+ EF + Q
Sbjct: 216 ISGYAGFIPRFTWVMGLNYRDGVMQAMDEFDKSQ 249


>AK097419-1|BAC05044.1|  271|Homo sapiens protein ( Homo sapiens
           cDNA FLJ40100 fis, clone TESTI2004675. ).
          Length = 271

 Score = 62.9 bits (146), Expect = 1e-09
 Identities = 26/52 (50%), Positives = 36/52 (69%)
 Frame = +3

Query: 162 QPHYIPGYTGHCPEYKYRIGDTYGSTTHKILLDPSVQHSERLVLSDRTADDF 317
           +PHY+PGY G  P+ +Y++G+TYG TT ++L DPSVQ S   VLS  +   F
Sbjct: 13  EPHYVPGYAGFFPQLRYQVGNTYGRTTGQLLTDPSVQKSPCSVLSPMSKPKF 64


>BC021737-1|AAH21737.1|  154|Homo sapiens chromosome 10 open reading
           frame 82 protein.
          Length = 154

 Score = 34.3 bits (75), Expect = 0.47
 Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
 Frame = +3

Query: 390 KHPMIPGYEGFLPRLN-AHF--GQRYTVSATEALSEFQRLQLNQRAARNQLE 536
           + P IPG+ G+LPR     F  G RYTV A     +F  L++ +RA +  L+
Sbjct: 101 QEPPIPGWAGYLPRAKVTEFGCGTRYTVMAKNCYKDF--LEITERAKKAHLK 150


>M19720-1|AAA59879.1|  364|Homo sapiens L-myc protein protein.
          Length = 364

 Score = 32.7 bits (71), Expect = 1.4
 Identities = 25/75 (33%), Positives = 33/75 (44%)
 Frame = +3

Query: 516 AARNQLERVVSLQAGKGQPWDLVDRFSATAEFKLPLVVVRPECAGILRDLPMDEPKLSPA 695
           +AR +LER VS +   G P     + SA  +    L    P  A      P+ EPK    
Sbjct: 100 SARERLERAVSDRLAPGAPRGNPPKASAAPDCTPSLEAGNPAPAA---PCPLGEPKTQAC 156

Query: 696 SHSVSPYFMENDDPD 740
           S S SP   EN++ D
Sbjct: 157 SGSESPSDSENEEID 171


>AL033527-8|CAI19407.1|  394|Homo sapiens v-myc myelocytomatosis
           viral oncogene homolog 1, lung carcinoma derived (avian)
           protein.
          Length = 394

 Score = 32.7 bits (71), Expect = 1.4
 Identities = 25/75 (33%), Positives = 33/75 (44%)
 Frame = +3

Query: 516 AARNQLERVVSLQAGKGQPWDLVDRFSATAEFKLPLVVVRPECAGILRDLPMDEPKLSPA 695
           +AR +LER VS +   G P     + SA  +    L    P  A      P+ EPK    
Sbjct: 130 SARERLERAVSDRLAPGAPRGNPPKASAAPDCTPSLEAGNPAPAA---PCPLGEPKTQAC 186

Query: 696 SHSVSPYFMENDDPD 740
           S S SP   EN++ D
Sbjct: 187 SGSESPSDSENEEID 201


>AL033527-7|CAB75682.1|  364|Homo sapiens v-myc myelocytomatosis
           viral oncogene homolog 1, lung carcinoma derived (avian)
           protein.
          Length = 364

 Score = 32.7 bits (71), Expect = 1.4
 Identities = 25/75 (33%), Positives = 33/75 (44%)
 Frame = +3

Query: 516 AARNQLERVVSLQAGKGQPWDLVDRFSATAEFKLPLVVVRPECAGILRDLPMDEPKLSPA 695
           +AR +LER VS +   G P     + SA  +    L    P  A      P+ EPK    
Sbjct: 100 SARERLERAVSDRLAPGAPRGNPPKASAAPDCTPSLEAGNPAPAA---PCPLGEPKTQAC 156

Query: 696 SHSVSPYFMENDDPD 740
           S S SP   EN++ D
Sbjct: 157 SGSESPSDSENEEID 171


>U50330-1|AAA93462.1|  986|Homo sapiens procollagen C-proteinase
           protein.
          Length = 986

 Score = 31.9 bits (69), Expect = 2.5
 Identities = 26/88 (29%), Positives = 40/88 (45%), Gaps = 7/88 (7%)
 Frame = -2

Query: 396 DACKRDRHYGNVRSRCLSRSVLDGR-SGSHRPFYRIAPASLNAARSDREGSCVLS----- 235
           D CK D  +  VRS   + S L G+  GS +P   +  +  N  R + +    +S     
Sbjct: 642 DVCKYD--FVEVRSGLTADSKLHGKFCGSEKP--EVITSQYNNMRVEFKSDNTVSKKGFK 697

Query: 234 SHTYRRSDTCTRDNDPCTQE-YNAVGRY 154
           +H +   D C++DN  C Q+  N  G Y
Sbjct: 698 AHFFSDKDECSKDNGGCQQDCVNTFGSY 725


>BC142953-1|AAI42954.1|  986|Homo sapiens bone morphogenetic protein
           1 protein.
          Length = 986

 Score = 31.9 bits (69), Expect = 2.5
 Identities = 26/88 (29%), Positives = 40/88 (45%), Gaps = 7/88 (7%)
 Frame = -2

Query: 396 DACKRDRHYGNVRSRCLSRSVLDGR-SGSHRPFYRIAPASLNAARSDREGSCVLS----- 235
           D CK D  +  VRS   + S L G+  GS +P   +  +  N  R + +    +S     
Sbjct: 642 DVCKYD--FVEVRSGLTADSKLHGKFCGSEKP--EVITSQYNNMRVEFKSDNTVSKKGFK 697

Query: 234 SHTYRRSDTCTRDNDPCTQE-YNAVGRY 154
           +H +   D C++DN  C Q+  N  G Y
Sbjct: 698 AHFFSDKDECSKDNGGCQQDCINTFGSY 725


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,938,737
Number of Sequences: 237096
Number of extensions: 2591035
Number of successful extensions: 9807
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 9506
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9800
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9015132854
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -