BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte10o15
(751 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC129999-1|AAI30000.1| 216|Homo sapiens LOC730112 protein protein. 72 3e-12
BC132918-1|AAI32919.1| 317|Homo sapiens similar to 4931415M17 p... 63 1e-09
BC132916-1|AAI32917.1| 317|Homo sapiens similar to 4931415M17 p... 63 1e-09
AK097419-1|BAC05044.1| 271|Homo sapiens protein ( Homo sapiens ... 63 1e-09
BC021737-1|AAH21737.1| 154|Homo sapiens chromosome 10 open read... 34 0.47
M19720-1|AAA59879.1| 364|Homo sapiens L-myc protein protein. 33 1.4
AL033527-8|CAI19407.1| 394|Homo sapiens v-myc myelocytomatosis ... 33 1.4
AL033527-7|CAB75682.1| 364|Homo sapiens v-myc myelocytomatosis ... 33 1.4
U50330-1|AAA93462.1| 986|Homo sapiens procollagen C-proteinase ... 32 2.5
BC142953-1|AAI42954.1| 986|Homo sapiens bone morphogenetic prot... 32 2.5
>BC129999-1|AAI30000.1| 216|Homo sapiens LOC730112 protein protein.
Length = 216
Score = 71.7 bits (168), Expect = 3e-12
Identities = 43/116 (37%), Positives = 55/116 (47%)
Frame = +3
Query: 165 PHYIPGYTGHCPEYKYRIGDTYGSTTHKILLDPSVQHSERLVLSDRTADDFQIYRPAQNE 344
PHYIPGYTGHCP ++ +G TYG T ++L P + RT I P E
Sbjct: 16 PHYIPGYTGHCPLLRFSVGQTYGQVTGQLLRGPPGLAWPPV---HRTLLP-PIRPPRSPE 71
Query: 345 IDIVNARFRNGDPVYKHPMIPGYEGFLPRLNAHFGQRYTVSATEALSEFQRLQLNQ 512
+ + R G MIPGY GF+PR F + + EALS+F L Q
Sbjct: 72 VPRESLPVRRGQERLSSSMIPGYTGFVPRAQFIFAKNCSQVWAEALSDFTHLHEKQ 127
>BC132918-1|AAI32919.1| 317|Homo sapiens similar to 4931415M17
protein protein.
Length = 317
Score = 62.9 bits (146), Expect = 1e-09
Identities = 26/52 (50%), Positives = 36/52 (69%)
Frame = +3
Query: 162 QPHYIPGYTGHCPEYKYRIGDTYGSTTHKILLDPSVQHSERLVLSDRTADDF 317
+PHY+PGY G P+ +Y++G+TYG TT ++L DPSVQ S VLS + F
Sbjct: 13 EPHYVPGYAGFFPQLRYQVGNTYGRTTGQLLTDPSVQKSPCSVLSPMSKPKF 64
Score = 30.3 bits (65), Expect = 7.7
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +3
Query: 402 IPGYEGFLPRLNAHFGQRYTVSATEALSEFQRLQ 503
I GY GF+PR G Y +A+ EF + Q
Sbjct: 216 ISGYAGFIPRFTWVMGLNYRDGVMQAMDEFDKSQ 249
>BC132916-1|AAI32917.1| 317|Homo sapiens similar to 4931415M17
protein protein.
Length = 317
Score = 62.9 bits (146), Expect = 1e-09
Identities = 26/52 (50%), Positives = 36/52 (69%)
Frame = +3
Query: 162 QPHYIPGYTGHCPEYKYRIGDTYGSTTHKILLDPSVQHSERLVLSDRTADDF 317
+PHY+PGY G P+ +Y++G+TYG TT ++L DPSVQ S VLS + F
Sbjct: 13 EPHYVPGYAGFFPQLRYQVGNTYGRTTGQLLTDPSVQKSPCSVLSPMSKPKF 64
Score = 30.3 bits (65), Expect = 7.7
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +3
Query: 402 IPGYEGFLPRLNAHFGQRYTVSATEALSEFQRLQ 503
I GY GF+PR G Y +A+ EF + Q
Sbjct: 216 ISGYAGFIPRFTWVMGLNYRDGVMQAMDEFDKSQ 249
>AK097419-1|BAC05044.1| 271|Homo sapiens protein ( Homo sapiens
cDNA FLJ40100 fis, clone TESTI2004675. ).
Length = 271
Score = 62.9 bits (146), Expect = 1e-09
Identities = 26/52 (50%), Positives = 36/52 (69%)
Frame = +3
Query: 162 QPHYIPGYTGHCPEYKYRIGDTYGSTTHKILLDPSVQHSERLVLSDRTADDF 317
+PHY+PGY G P+ +Y++G+TYG TT ++L DPSVQ S VLS + F
Sbjct: 13 EPHYVPGYAGFFPQLRYQVGNTYGRTTGQLLTDPSVQKSPCSVLSPMSKPKF 64
>BC021737-1|AAH21737.1| 154|Homo sapiens chromosome 10 open reading
frame 82 protein.
Length = 154
Score = 34.3 bits (75), Expect = 0.47
Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Frame = +3
Query: 390 KHPMIPGYEGFLPRLN-AHF--GQRYTVSATEALSEFQRLQLNQRAARNQLE 536
+ P IPG+ G+LPR F G RYTV A +F L++ +RA + L+
Sbjct: 101 QEPPIPGWAGYLPRAKVTEFGCGTRYTVMAKNCYKDF--LEITERAKKAHLK 150
>M19720-1|AAA59879.1| 364|Homo sapiens L-myc protein protein.
Length = 364
Score = 32.7 bits (71), Expect = 1.4
Identities = 25/75 (33%), Positives = 33/75 (44%)
Frame = +3
Query: 516 AARNQLERVVSLQAGKGQPWDLVDRFSATAEFKLPLVVVRPECAGILRDLPMDEPKLSPA 695
+AR +LER VS + G P + SA + L P A P+ EPK
Sbjct: 100 SARERLERAVSDRLAPGAPRGNPPKASAAPDCTPSLEAGNPAPAA---PCPLGEPKTQAC 156
Query: 696 SHSVSPYFMENDDPD 740
S S SP EN++ D
Sbjct: 157 SGSESPSDSENEEID 171
>AL033527-8|CAI19407.1| 394|Homo sapiens v-myc myelocytomatosis
viral oncogene homolog 1, lung carcinoma derived (avian)
protein.
Length = 394
Score = 32.7 bits (71), Expect = 1.4
Identities = 25/75 (33%), Positives = 33/75 (44%)
Frame = +3
Query: 516 AARNQLERVVSLQAGKGQPWDLVDRFSATAEFKLPLVVVRPECAGILRDLPMDEPKLSPA 695
+AR +LER VS + G P + SA + L P A P+ EPK
Sbjct: 130 SARERLERAVSDRLAPGAPRGNPPKASAAPDCTPSLEAGNPAPAA---PCPLGEPKTQAC 186
Query: 696 SHSVSPYFMENDDPD 740
S S SP EN++ D
Sbjct: 187 SGSESPSDSENEEID 201
>AL033527-7|CAB75682.1| 364|Homo sapiens v-myc myelocytomatosis
viral oncogene homolog 1, lung carcinoma derived (avian)
protein.
Length = 364
Score = 32.7 bits (71), Expect = 1.4
Identities = 25/75 (33%), Positives = 33/75 (44%)
Frame = +3
Query: 516 AARNQLERVVSLQAGKGQPWDLVDRFSATAEFKLPLVVVRPECAGILRDLPMDEPKLSPA 695
+AR +LER VS + G P + SA + L P A P+ EPK
Sbjct: 100 SARERLERAVSDRLAPGAPRGNPPKASAAPDCTPSLEAGNPAPAA---PCPLGEPKTQAC 156
Query: 696 SHSVSPYFMENDDPD 740
S S SP EN++ D
Sbjct: 157 SGSESPSDSENEEID 171
>U50330-1|AAA93462.1| 986|Homo sapiens procollagen C-proteinase
protein.
Length = 986
Score = 31.9 bits (69), Expect = 2.5
Identities = 26/88 (29%), Positives = 40/88 (45%), Gaps = 7/88 (7%)
Frame = -2
Query: 396 DACKRDRHYGNVRSRCLSRSVLDGR-SGSHRPFYRIAPASLNAARSDREGSCVLS----- 235
D CK D + VRS + S L G+ GS +P + + N R + + +S
Sbjct: 642 DVCKYD--FVEVRSGLTADSKLHGKFCGSEKP--EVITSQYNNMRVEFKSDNTVSKKGFK 697
Query: 234 SHTYRRSDTCTRDNDPCTQE-YNAVGRY 154
+H + D C++DN C Q+ N G Y
Sbjct: 698 AHFFSDKDECSKDNGGCQQDCVNTFGSY 725
>BC142953-1|AAI42954.1| 986|Homo sapiens bone morphogenetic protein
1 protein.
Length = 986
Score = 31.9 bits (69), Expect = 2.5
Identities = 26/88 (29%), Positives = 40/88 (45%), Gaps = 7/88 (7%)
Frame = -2
Query: 396 DACKRDRHYGNVRSRCLSRSVLDGR-SGSHRPFYRIAPASLNAARSDREGSCVLS----- 235
D CK D + VRS + S L G+ GS +P + + N R + + +S
Sbjct: 642 DVCKYD--FVEVRSGLTADSKLHGKFCGSEKP--EVITSQYNNMRVEFKSDNTVSKKGFK 697
Query: 234 SHTYRRSDTCTRDNDPCTQE-YNAVGRY 154
+H + D C++DN C Q+ N G Y
Sbjct: 698 AHFFSDKDECSKDNGGCQQDCINTFGSY 725
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,938,737
Number of Sequences: 237096
Number of extensions: 2591035
Number of successful extensions: 9807
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 9506
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9800
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9015132854
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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