Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10o14
         (577 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_1190 + 9463973-9465732,9466210-9466440,9467664-9467793,946...    29   2.0  
01_05_0501 + 22764978-22765896,22766087-22766349,22766613-227668...    29   2.7  

>01_01_1190 +
           9463973-9465732,9466210-9466440,9467664-9467793,
           9468723-9468888,9469528-9469859,9470284-9470513,
           9471535-9471613,9471689-9471865
          Length = 1034

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 12/25 (48%), Positives = 18/25 (72%)
 Frame = -3

Query: 239 RLENGEISEDNSTDNEDDINYYSSQ 165
           RLE+ +IS+ NS   E+D+N +S Q
Sbjct: 444 RLEDSDISKGNSGTKEEDVNCFSPQ 468


>01_05_0501 +
           22764978-22765896,22766087-22766349,22766613-22766836,
           22767419-22767749,22767968-22768372
          Length = 713

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 11/27 (40%), Positives = 20/27 (74%)
 Frame = -3

Query: 248 ISKRLENGEISEDNSTDNEDDINYYSS 168
           I ++  +GE+ ED+STD++DD +  S+
Sbjct: 127 IRRKKRDGELDEDDSTDDDDDTDSCST 153


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,475,936
Number of Sequences: 37544
Number of extensions: 191888
Number of successful extensions: 444
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 438
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 444
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1340735508
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)