Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10o14
         (577 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_14297| Best HMM Match : No HMM Matches (HMM E-Value=.)              33   0.17 
SB_20359| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   4.8  
SB_21227| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   8.3  
SB_20830| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   8.3  

>SB_14297| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 453

 Score = 33.1 bits (72), Expect = 0.17
 Identities = 12/29 (41%), Positives = 24/29 (82%)
 Frame = -3

Query: 263 EEIESISKRLENGEISEDNSTDNEDDINY 177
           EE ESI+ + +NG+ S+++S+D ED++++
Sbjct: 221 EEFESIATQCKNGKKSDNDSSDTEDELDF 249


>SB_20359| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 4700

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 12/35 (34%), Positives = 21/35 (60%)
 Frame = -3

Query: 287  RNLSKMRPEEIESISKRLENGEISEDNSTDNEDDI 183
            RNL K + +E+   ++RLENG +   ++    DD+
Sbjct: 3258 RNLLKKKSKELTQKTERLENGLLKLQSTAQQVDDL 3292


>SB_21227| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 81

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 14/46 (30%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
 Frame = +3

Query: 81  CRRICIQVWVSGKIT--YILFIF*LHQTISLARIIVYVIFIVGRIV 212
           C+RI I + ++  IT  YI+ I  +   I+L   ++Y+I I+  ++
Sbjct: 5   CKRIDISIIITIIITVIYIIIIITVIYNITLIITVIYIIIIINIVI 50


>SB_20830| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 381

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 13/42 (30%), Positives = 18/42 (42%)
 Frame = +2

Query: 137 HLLAPSDDLFGSNNSLCHLHCR*NCLPKFHHFLTALICSQSL 262
           H       +F  N+ LC  H R      FHHF  A+  + +L
Sbjct: 114 HFTPSEKQIFKENSKLCDAHHRRLLEEHFHHFSKAMGAAHTL 155


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,488,991
Number of Sequences: 59808
Number of extensions: 230271
Number of successful extensions: 732
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 598
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 732
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1373676929
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)