Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10o14
         (577 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U67955-3|AAO91745.1|  655|Caenorhabditis elegans Hypothetical pr...    29   3.1  
U67955-2|AAB07583.2|  791|Caenorhabditis elegans Hypothetical pr...    29   3.1  
AL032623-13|CAA21504.1|  465|Caenorhabditis elegans Hypothetical...    27   7.2  

>U67955-3|AAO91745.1|  655|Caenorhabditis elegans Hypothetical
           protein C16H3.3b protein.
          Length = 655

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 17/33 (51%), Positives = 19/33 (57%)
 Frame = +2

Query: 71  LLLLQADLHPSLGQWENYLYPLHLLAPSDDLFG 169
           +LL      P LG+ E  LYPL LL P DDL G
Sbjct: 291 ILLQSKTWKPWLGE-EVELYPLDLLPPEDDLPG 322


>U67955-2|AAB07583.2|  791|Caenorhabditis elegans Hypothetical
           protein C16H3.3a protein.
          Length = 791

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 17/33 (51%), Positives = 19/33 (57%)
 Frame = +2

Query: 71  LLLLQADLHPSLGQWENYLYPLHLLAPSDDLFG 169
           +LL      P LG+ E  LYPL LL P DDL G
Sbjct: 427 ILLQSKTWKPWLGE-EVELYPLDLLPPEDDLPG 458


>AL032623-13|CAA21504.1|  465|Caenorhabditis elegans Hypothetical
           protein Y43F8B.13 protein.
          Length = 465

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 12/24 (50%), Positives = 17/24 (70%)
 Frame = +2

Query: 449 FLEVKHVLAKNNYILAKIIYSLTS 520
           FLE   +L KN+Y++ KII  +TS
Sbjct: 344 FLEKFKILMKNHYVIRKIITIITS 367


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,334,950
Number of Sequences: 27780
Number of extensions: 181735
Number of successful extensions: 521
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 511
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 521
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1194789454
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)