Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte10o11
(678 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g34320.1 68414.m04259 expressed protein contains Pfam domain ... 33 0.23
At3g49800.1 68416.m05445 BSD domain-containing protein contains ... 32 0.40
At5g58300.1 68418.m07298 leucine-rich repeat transmembrane prote... 29 2.1
At2g04900.1 68415.m00509 expressed protein 29 2.8
At4g20260.2 68417.m02960 DREPP plasma membrane polypeptide famil... 29 3.7
At4g20260.1 68417.m02959 DREPP plasma membrane polypeptide famil... 29 3.7
At3g07090.1 68416.m00843 expressed protein 28 4.9
At1g64550.1 68414.m07317 ABC transporter family protein similar ... 28 4.9
At3g11310.1 68416.m01375 hypothetical protein 28 6.5
At1g04140.2 68414.m00404 transducin family protein / WD-40 repea... 28 6.5
At1g04140.1 68414.m00403 transducin family protein / WD-40 repea... 28 6.5
At1g79930.1 68414.m09340 heat shock protein, putative contains P... 27 8.6
At1g12080.2 68414.m01397 expressed protein 27 8.6
>At1g34320.1 68414.m04259 expressed protein contains Pfam domain
PF05003: protein of unknown function (DUF668)
Length = 657
Score = 32.7 bits (71), Expect = 0.23
Identities = 22/89 (24%), Positives = 44/89 (49%), Gaps = 3/89 (3%)
Frame = +2
Query: 407 FFHTYSLPVNSSAADVTAELTSDGYLVVTAPISENVDKTKNTER--VVPIVETGA-PYKK 577
F H +N++A+D+ + G +P++ENVD K+T PIV +G+ P
Sbjct: 19 FAHVNGHHLNNNASDLNSHSGESGLKDDPSPVTENVDDNKHTSESFSFPIVSSGSHPQNI 78
Query: 578 DEPVEKTTVETLDVSTTQEPKTSAPAVVT 664
++ + + + S + + + +A A V+
Sbjct: 79 EDGIPRLSRVLSQKSRSTKSRQAAVAKVS 107
>At3g49800.1 68416.m05445 BSD domain-containing protein contains
Pfam profile PF03909: BSD domain
Length = 428
Score = 31.9 bits (69), Expect = 0.40
Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 3/96 (3%)
Frame = +2
Query: 386 HDVFASQFFHTYSLP-VNSSAADVTAELTSDGYLVVTAPISENVDKTKNTERVVPIVETG 562
H +F+ T S P V S A ++ EL T + E+ D+ ++E V P+ +
Sbjct: 244 HPIFSKHDALTLSTPQVLESRALLSHELLRKRNKD-TVVVPESSDRGADSENVEPLFQPT 302
Query: 563 APYKKDEP--VEKTTVETLDVSTTQEPKTSAPAVVT 664
P K EP V+ TVET+ + E +T V T
Sbjct: 303 NPSPKSEPEPVKTITVETIHSAERSEFETEKHTVET 338
>At5g58300.1 68418.m07298 leucine-rich repeat transmembrane protein
kinase, putative
Length = 654
Score = 29.5 bits (63), Expect = 2.1
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Frame = -1
Query: 237 KVGISFHKGANRLN---GERFSHGNVNWSSVMETGCAITSLSRAGKAVTVAKPAKAMKTA 67
K+ +S KG L+ G +FSHGN+ S+V+ + +S G +A P M+ A
Sbjct: 461 KITLSAAKGIAHLHAAGGPKFSHGNIKSSNVIMKQESDACISDFGLTPLMAVPIAPMRGA 520
Query: 66 KRRGENI 46
R +
Sbjct: 521 GYRAPEV 527
>At2g04900.1 68415.m00509 expressed protein
Length = 128
Score = 29.1 bits (62), Expect = 2.8
Identities = 11/38 (28%), Positives = 24/38 (63%)
Frame = -1
Query: 540 TRSVFFVLSTFSLIGAVTTRYPSEVSSAVTSAALEFTG 427
T S++ ++ T +L+ A +T+YP+ +T+ + F+G
Sbjct: 58 TASLYHLVHTAALVSAPSTKYPNIFGGLLTAGIVAFSG 95
>At4g20260.2 68417.m02960 DREPP plasma membrane polypeptide family
protein contains Pfam profile: PF05558 DREPP plasma
membrane polypeptide
Length = 225
Score = 28.7 bits (61), Expect = 3.7
Identities = 24/97 (24%), Positives = 41/97 (42%), Gaps = 2/97 (2%)
Frame = +2
Query: 392 VFASQFFHTYSLPVNSSAADVTAELTSDGYLVVTAPISEN-VDKTKNTERV-VPIVETGA 565
VF + T +PV A+ A+ T+ E V++TK E +VE
Sbjct: 128 VFLPEEVKTKEIPVEEVKAEEPAKTEEPAKTEGTSGEKEEIVEETKKGETPETAVVEEKK 187
Query: 566 PYKKDEPVEKTTVETLDVSTTQEPKTSAPAVVTAAPE 676
P +++ E T + + +EP+T+ A V P+
Sbjct: 188 PEVEEKKEEATPAPAVVETPVKEPETTTTAPVAEPPK 224
>At4g20260.1 68417.m02959 DREPP plasma membrane polypeptide family
protein contains Pfam profile: PF05558 DREPP plasma
membrane polypeptide
Length = 225
Score = 28.7 bits (61), Expect = 3.7
Identities = 24/97 (24%), Positives = 41/97 (42%), Gaps = 2/97 (2%)
Frame = +2
Query: 392 VFASQFFHTYSLPVNSSAADVTAELTSDGYLVVTAPISEN-VDKTKNTERV-VPIVETGA 565
VF + T +PV A+ A+ T+ E V++TK E +VE
Sbjct: 128 VFLPEEVKTKEIPVEEVKAEEPAKTEEPAKTEGTSGEKEEIVEETKKGETPETAVVEEKK 187
Query: 566 PYKKDEPVEKTTVETLDVSTTQEPKTSAPAVVTAAPE 676
P +++ E T + + +EP+T+ A V P+
Sbjct: 188 PEVEEKKEEATPAPAVVETPVKEPETTTTAPVAEPPK 224
>At3g07090.1 68416.m00843 expressed protein
Length = 265
Score = 28.3 bits (60), Expect = 4.9
Identities = 17/68 (25%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Frame = +2
Query: 473 DGYLVVTAPISENVDKTKNTERVVPIVETGAPYK--KDEPVEKTTVETLDVSTTQEPKTS 646
DG +V AP E + + TE+V P+++ A + KD+P+ + + T++
Sbjct: 177 DGPQIVIAPKLEAAETSTATEKVPPVIQPSASKEKVKDDPLGDARAKIQEEITSEFAALM 236
Query: 647 APAVVTAA 670
A + A+
Sbjct: 237 AQGTLRAS 244
>At1g64550.1 68414.m07317 ABC transporter family protein similar to
ABC transporter protein GB:AAF31030 GI:6899653 from
[Leishmania major]
Length = 715
Score = 28.3 bits (60), Expect = 4.9
Identities = 18/65 (27%), Positives = 29/65 (44%), Gaps = 4/65 (6%)
Frame = +2
Query: 425 LPVNSSAADVTAELTSDGYLVVTAPISENVDKTKNTERVVPIV----ETGAPYKKDEPVE 592
+P N V E+ D + ++ ++++TK E + I+ ET P KD
Sbjct: 228 IPTNCQILHVEQEVVGDKTTALQCVLNTDIERTKLLEEEIQILAKQRETEEPTAKDGMPT 287
Query: 593 KTTVE 607
K TVE
Sbjct: 288 KDTVE 292
>At3g11310.1 68416.m01375 hypothetical protein
Length = 539
Score = 27.9 bits (59), Expect = 6.5
Identities = 17/68 (25%), Positives = 30/68 (44%), Gaps = 7/68 (10%)
Frame = +2
Query: 353 VQGSQEAKEDDHDVFASQFFHTYSLPVNSSAADVTAELT-------SDGYLVVTAPISEN 511
V GS+ +DDH + F + P +SS D+ +T D Y+V+ +
Sbjct: 339 VPGSEGGADDDHHIVMDHHFESPHDPASSSEIDLNEPVTGSEGGADDDHYIVLNHLVESP 398
Query: 512 VDKTKNTE 535
D+ ++E
Sbjct: 399 HDRAPSSE 406
>At1g04140.2 68414.m00404 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to neural cell adhesion molecule 2, large
isoform precursor gb|M76710 from Xenopus laevis, and
beta transducin from S. cerevisiae gb|Q05946. ESTs
gb|N65081 gb|Z30910, gb|Z34190, gb|Z34611, gb|R30101,
gb|H36304, and gb|N65606 come from
Length = 793
Score = 27.9 bits (59), Expect = 6.5
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = -1
Query: 492 VTTRYPSEVSSAVTSAALEFTGRL*VWKN 406
V R PSE++S++ +A L T +L VW +
Sbjct: 536 VVNRIPSELASSIAAAELPCTVKLRVWSH 564
>At1g04140.1 68414.m00403 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to neural cell adhesion molecule 2, large
isoform precursor gb|M76710 from Xenopus laevis, and
beta transducin from S. cerevisiae gb|Q05946. ESTs
gb|N65081 gb|Z30910, gb|Z34190, gb|Z34611, gb|R30101,
gb|H36304, and gb|N65606 come from
Length = 790
Score = 27.9 bits (59), Expect = 6.5
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = -1
Query: 492 VTTRYPSEVSSAVTSAALEFTGRL*VWKN 406
V R PSE++S++ +A L T +L VW +
Sbjct: 536 VVNRIPSELASSIAAAELPCTVKLRVWSH 564
>At1g79930.1 68414.m09340 heat shock protein, putative contains Pfam
profile: PF00012 Heat shock hsp70 proteins; similar to
heat-shock proteins GB:CAA94389, GB:AAD55461
[Arabidopsis thaliana]
Length = 831
Score = 27.5 bits (58), Expect = 8.6
Identities = 19/80 (23%), Positives = 33/80 (41%), Gaps = 4/80 (5%)
Frame = +2
Query: 425 LPVNSSAADVTAELTSDGYLVVTAPISE----NVDKTKNTERVVPIVETGAPYKKDEPVE 592
+PV ++ T ++ SD AP S N+ K+T + G P ++PV+
Sbjct: 507 VPVTKEHSEETTKMDSDKASAEAAPASGDCDVNMQDAKDTSDATG-TDNGVPESAEKPVQ 565
Query: 593 KTTVETLDVSTTQEPKTSAP 652
T + + KT+ P
Sbjct: 566 METDSKAEAPKKKVKKTNVP 585
>At1g12080.2 68414.m01397 expressed protein
Length = 138
Score = 27.5 bits (58), Expect = 8.6
Identities = 18/52 (34%), Positives = 24/52 (46%)
Frame = +2
Query: 521 TKNTERVVPIVETGAPYKKDEPVEKTTVETLDVSTTQEPKTSAPAVVTAAPE 676
T E+V P+ + VE+T VET TQ+P+ S PAV E
Sbjct: 3 TVEVEQVTPVAVENVEVPT-KTVEETVVET---EVTQQPEESVPAVTEQKSE 50
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,198,019
Number of Sequences: 28952
Number of extensions: 220273
Number of successful extensions: 755
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 747
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 755
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1428369392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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