Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10o10
         (487 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    23   1.1  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    23   1.1  
AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.       22   3.4  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    21   5.9  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    21   7.9  

>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 23.4 bits (48), Expect = 1.1
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +2

Query: 422 FCIFFYVYNQEIKV 463
           FCIF Y+Y+ E+ V
Sbjct: 259 FCIFGYIYDDEMVV 272



 Score = 21.4 bits (43), Expect = 4.5
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +2

Query: 407 VKLSVFCIFFYVYNQEIKVIFFYLKK 484
           V L  FC F  V  Q+  V+  Y+K+
Sbjct: 179 VMLIQFCAFVVVLKQKFCVVNQYIKQ 204


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 23.4 bits (48), Expect = 1.1
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +2

Query: 422 FCIFFYVYNQEIKV 463
           FCIF Y+Y+ E+ V
Sbjct: 84  FCIFGYIYDDEMVV 97



 Score = 21.4 bits (43), Expect = 4.5
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +2

Query: 407 VKLSVFCIFFYVYNQEIKVIFFYLKK 484
           V L  FC F  V  Q+  V+  Y+K+
Sbjct: 4   VMLIQFCAFVVVLKQKFCVVNQYIKQ 29


>AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.
          Length = 256

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 11/35 (31%), Positives = 17/35 (48%)
 Frame = +1

Query: 250 EELHQPIFIQVEQNENCEEPNSAFLARSSILVMIV 354
           ++LH PI   V  + N  +PN A     S ++  V
Sbjct: 40  DKLHHPIHQTVIYHNNPRDPNRARSVSYSTVIQSV 74


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 21.0 bits (42), Expect = 5.9
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +2

Query: 287 KMKTVKNRTPPS 322
           K+KT  N+ PPS
Sbjct: 448 KLKTANNKRPPS 459


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 6/16 (37%), Positives = 12/16 (75%)
 Frame = +2

Query: 173 VHGNSVEPEQCLQQEQ 220
           ++ +++EPE C Q E+
Sbjct: 573 INSDALEPEWCWQNEE 588


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,658
Number of Sequences: 336
Number of extensions: 2186
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11315916
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)