Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte10o10
(487 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
S80440-1|AAB35919.1| 98|Homo sapiens apolipoprotein D protein. 39 0.008
M16696-1|AAA51764.1| 189|Homo sapiens APOD protein. 39 0.008
J02611-1|AAB59517.1| 189|Homo sapiens APOD protein. 39 0.008
CR541773-1|CAG46572.1| 189|Homo sapiens APOD protein. 39 0.008
CR456838-1|CAG33119.1| 189|Homo sapiens APOD protein. 39 0.008
BT019861-1|AAV38664.1| 189|Homo sapiens apolipoprotein D protein. 39 0.008
BT019860-1|AAV38663.1| 189|Homo sapiens apolipoprotein D protein. 39 0.008
BC007402-1|AAH07402.1| 189|Homo sapiens apolipoprotein D protein. 39 0.008
U17690-2|AAB48379.1| 840|Homo sapiens neurofibromatosis 1 protein. 32 1.2
U17690-1|AAB48380.1| 861|Homo sapiens neurofibromatosis 1 protein. 32 1.2
M89914-1|AAA59925.1| 2839|Homo sapiens neurofibromin protein. 32 1.2
M82814-1|AAA59924.1| 2818|Homo sapiens GAP-related protein protein. 32 1.2
M61213-1|AAA59923.1| 482|Homo sapiens neurofibromatosis protein... 32 1.2
M60915-2|AAA59922.1| 378|Homo sapiens neurofibromatosis protein... 32 1.2
M60915-1|AAA59921.1| 399|Homo sapiens neurofibromatosis protein... 32 1.2
M38107-1|AAB59558.1| 2503|Homo sapiens neurofibromatosis protein... 32 1.2
M38106-1|AAA74897.1| 2485|Homo sapiens neurofibromatosis type 1 ... 32 1.2
AY796305-1|AAV50004.1| 2818|Homo sapiens neurofibromin 1 (neurof... 32 1.2
AB209336-1|BAD92573.1| 968|Homo sapiens neurofibromin variant p... 32 1.2
AB046779-1|BAB13385.1| 544|Homo sapiens KIAA1559 protein protein. 30 3.8
>S80440-1|AAB35919.1| 98|Homo sapiens apolipoprotein D protein.
Length = 98
Score = 39.1 bits (87), Expect = 0.008
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = +1
Query: 82 TTPLYVLTTDYQSYSLAYSCVNINNFQRAVGAWKLSRTRTMP 207
+ P ++L TDY++Y+L YSC I AW L+R +P
Sbjct: 24 SAPYWILATDYENYALVYSCTCIIQLFHVDFAWILARNPNLP 65
>M16696-1|AAA51764.1| 189|Homo sapiens APOD protein.
Length = 189
Score = 39.1 bits (87), Expect = 0.008
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = +1
Query: 82 TTPLYVLTTDYQSYSLAYSCVNINNFQRAVGAWKLSRTRTMP 207
+ P ++L TDY++Y+L YSC I AW L+R +P
Sbjct: 115 SAPYWILATDYENYALVYSCTCIIQLFHVDFAWILARNPNLP 156
>J02611-1|AAB59517.1| 189|Homo sapiens APOD protein.
Length = 189
Score = 39.1 bits (87), Expect = 0.008
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = +1
Query: 82 TTPLYVLTTDYQSYSLAYSCVNINNFQRAVGAWKLSRTRTMP 207
+ P ++L TDY++Y+L YSC I AW L+R +P
Sbjct: 115 SAPYWILATDYENYALVYSCTCIIQLFHVDFAWILARNPNLP 156
>CR541773-1|CAG46572.1| 189|Homo sapiens APOD protein.
Length = 189
Score = 39.1 bits (87), Expect = 0.008
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = +1
Query: 82 TTPLYVLTTDYQSYSLAYSCVNINNFQRAVGAWKLSRTRTMP 207
+ P ++L TDY++Y+L YSC I AW L+R +P
Sbjct: 115 SAPYWILATDYENYALVYSCTCIIQLFHVDFAWILARNPNLP 156
>CR456838-1|CAG33119.1| 189|Homo sapiens APOD protein.
Length = 189
Score = 39.1 bits (87), Expect = 0.008
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = +1
Query: 82 TTPLYVLTTDYQSYSLAYSCVNINNFQRAVGAWKLSRTRTMP 207
+ P ++L TDY++Y+L YSC I AW L+R +P
Sbjct: 115 SAPYWILATDYENYALVYSCTCIIQLFHVDFAWILARNPNLP 156
>BT019861-1|AAV38664.1| 189|Homo sapiens apolipoprotein D protein.
Length = 189
Score = 39.1 bits (87), Expect = 0.008
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = +1
Query: 82 TTPLYVLTTDYQSYSLAYSCVNINNFQRAVGAWKLSRTRTMP 207
+ P ++L TDY++Y+L YSC I AW L+R +P
Sbjct: 115 SAPYWILATDYENYALVYSCTCIIQLFHVDFAWILARNPNLP 156
>BT019860-1|AAV38663.1| 189|Homo sapiens apolipoprotein D protein.
Length = 189
Score = 39.1 bits (87), Expect = 0.008
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = +1
Query: 82 TTPLYVLTTDYQSYSLAYSCVNINNFQRAVGAWKLSRTRTMP 207
+ P ++L TDY++Y+L YSC I AW L+R +P
Sbjct: 115 SAPYWILATDYENYALVYSCTCIIQLFHVDFAWILARNPNLP 156
>BC007402-1|AAH07402.1| 189|Homo sapiens apolipoprotein D protein.
Length = 189
Score = 39.1 bits (87), Expect = 0.008
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = +1
Query: 82 TTPLYVLTTDYQSYSLAYSCVNINNFQRAVGAWKLSRTRTMP 207
+ P ++L TDY++Y+L YSC I AW L+R +P
Sbjct: 115 SAPYWILATDYENYALVYSCTCIIQLFHVDFAWILARNPNLP 156
>U17690-2|AAB48379.1| 840|Homo sapiens neurofibromatosis 1 protein.
Length = 840
Score = 31.9 bits (69), Expect = 1.2
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +3
Query: 21 LHKYYYCNSD*ISRYTSRNRDHASL--RSHDGLPELLTGL*LCKHQQFPESRW 173
LH+ + N + I +Y S NRDH ++ R D + LL L +H+ ++ W
Sbjct: 736 LHRLLWNNQEKIGQYLSSNRDHKAVGRRPFDKMATLLAYLGPPEHKPVADTHW 788
>U17690-1|AAB48380.1| 861|Homo sapiens neurofibromatosis 1 protein.
Length = 861
Score = 31.9 bits (69), Expect = 1.2
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +3
Query: 21 LHKYYYCNSD*ISRYTSRNRDHASL--RSHDGLPELLTGL*LCKHQQFPESRW 173
LH+ + N + I +Y S NRDH ++ R D + LL L +H+ ++ W
Sbjct: 757 LHRLLWNNQEKIGQYLSSNRDHKAVGRRPFDKMATLLAYLGPPEHKPVADTHW 809
>M89914-1|AAA59925.1| 2839|Homo sapiens neurofibromin protein.
Length = 2839
Score = 31.9 bits (69), Expect = 1.2
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +3
Query: 21 LHKYYYCNSD*ISRYTSRNRDHASL--RSHDGLPELLTGL*LCKHQQFPESRW 173
LH+ + N + I +Y S NRDH ++ R D + LL L +H+ ++ W
Sbjct: 1507 LHRLLWNNQEKIGQYLSSNRDHKAVGRRPFDKMATLLAYLGPPEHKPVADTHW 1559
>M82814-1|AAA59924.1| 2818|Homo sapiens GAP-related protein protein.
Length = 2818
Score = 31.9 bits (69), Expect = 1.2
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +3
Query: 21 LHKYYYCNSD*ISRYTSRNRDHASL--RSHDGLPELLTGL*LCKHQQFPESRW 173
LH+ + N + I +Y S NRDH ++ R D + LL L +H+ ++ W
Sbjct: 1486 LHRLLWNNQEKIGQYLSSNRDHKAVGRRPFDKMATLLAYLGPPEHKPVADTHW 1538
>M61213-1|AAA59923.1| 482|Homo sapiens neurofibromatosis protein
type 1 protein.
Length = 482
Score = 31.9 bits (69), Expect = 1.2
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +3
Query: 21 LHKYYYCNSD*ISRYTSRNRDHASL--RSHDGLPELLTGL*LCKHQQFPESRW 173
LH+ + N + I +Y S NRDH ++ R D + LL L +H+ ++ W
Sbjct: 391 LHRLLWNNQEKIGQYLSSNRDHKAVGRRPFDKMATLLAYLGPPEHKPVADTHW 443
>M60915-2|AAA59922.1| 378|Homo sapiens neurofibromatosis protein
type 1 protein.
Length = 378
Score = 31.9 bits (69), Expect = 1.2
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +3
Query: 21 LHKYYYCNSD*ISRYTSRNRDHASL--RSHDGLPELLTGL*LCKHQQFPESRW 173
LH+ + N + I +Y S NRDH ++ R D + LL L +H+ ++ W
Sbjct: 319 LHRLLWNNQEKIGQYLSSNRDHKAVGRRPFDKMATLLAYLGPPEHKPVADTHW 371
>M60915-1|AAA59921.1| 399|Homo sapiens neurofibromatosis protein
type 1 protein.
Length = 399
Score = 31.9 bits (69), Expect = 1.2
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +3
Query: 21 LHKYYYCNSD*ISRYTSRNRDHASL--RSHDGLPELLTGL*LCKHQQFPESRW 173
LH+ + N + I +Y S NRDH ++ R D + LL L +H+ ++ W
Sbjct: 340 LHRLLWNNQEKIGQYLSSNRDHKAVGRRPFDKMATLLAYLGPPEHKPVADTHW 392
>M38107-1|AAB59558.1| 2503|Homo sapiens neurofibromatosis protein type
1 protein.
Length = 2503
Score = 31.9 bits (69), Expect = 1.2
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +3
Query: 21 LHKYYYCNSD*ISRYTSRNRDHASL--RSHDGLPELLTGL*LCKHQQFPESRW 173
LH+ + N + I +Y S NRDH ++ R D + LL L +H+ ++ W
Sbjct: 1152 LHRLLWNNQEKIGQYLSSNRDHKAVGRRPFDKMATLLAYLGPPEHKPVADTHW 1204
>M38106-1|AAA74897.1| 2485|Homo sapiens neurofibromatosis type 1
protein protein.
Length = 2485
Score = 31.9 bits (69), Expect = 1.2
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +3
Query: 21 LHKYYYCNSD*ISRYTSRNRDHASL--RSHDGLPELLTGL*LCKHQQFPESRW 173
LH+ + N + I +Y S NRDH ++ R D + LL L +H+ ++ W
Sbjct: 1152 LHRLLWNNQEKIGQYLSSNRDHKAVGRRPFDKMATLLAYLGPPEHKPVADTHW 1204
>AY796305-1|AAV50004.1| 2818|Homo sapiens neurofibromin 1
(neurofibromatosis, von Recklinghausen disease, Watson
disease) protein.
Length = 2818
Score = 31.9 bits (69), Expect = 1.2
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +3
Query: 21 LHKYYYCNSD*ISRYTSRNRDHASL--RSHDGLPELLTGL*LCKHQQFPESRW 173
LH+ + N + I +Y S NRDH ++ R D + LL L +H+ ++ W
Sbjct: 1486 LHRLLWNNQEKIGQYLSSNRDHKAVGRRPFDKMATLLAYLGPPEHKPVADTHW 1538
>AB209336-1|BAD92573.1| 968|Homo sapiens neurofibromin variant
protein.
Length = 968
Score = 31.9 bits (69), Expect = 1.2
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +3
Query: 21 LHKYYYCNSD*ISRYTSRNRDHASL--RSHDGLPELLTGL*LCKHQQFPESRW 173
LH+ + N + I +Y S NRDH ++ R D + LL L +H+ ++ W
Sbjct: 536 LHRLLWNNQEKIGQYLSSNRDHKAVGRRPFDKMATLLAYLGPPEHKPVADTHW 588
>AB046779-1|BAB13385.1| 544|Homo sapiens KIAA1559 protein protein.
Length = 544
Score = 30.3 bits (65), Expect = 3.8
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +2
Query: 203 CLQQEQRLSTLTWHKEKNSTNLYSFRWNKMKTVKN 307
C E R T T EK+ +YSF+W+ M+ +K+
Sbjct: 88 CPDLESRYRTNTLSPEKDIYEIYSFQWDIMERIKS 122
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,020,774
Number of Sequences: 237096
Number of extensions: 1196630
Number of successful extensions: 1862
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1809
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1862
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4384610846
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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