Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10o10
         (487 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g47990.1 68418.m05929 cytochrome P450 family protein similar ...    27   8.9  
At4g32200.1 68417.m04582 DNA-binding HORMA domain-containing pro...    27   8.9  

>At5g47990.1 68418.m05929 cytochrome P450 family protein similar to
           Cytochrome P450 93A3  (P450 CP5) (SP:O81973)  [Glycine
           max];
          Length = 511

 Score = 26.6 bits (56), Expect = 8.9
 Identities = 12/22 (54%), Positives = 16/22 (72%)
 Frame = +1

Query: 418 CFLYIFLCL*SRNKSYFLLFKK 483
           CF+++ LCL SR  SY L F+K
Sbjct: 12  CFIFLLLCLFSR-LSYDLFFRK 32


>At4g32200.1 68417.m04582 DNA-binding HORMA domain-containing
           protein similar to meiotic asynaptic mutant 1
           [Arabidopsis thaliana] GI:7939627, aysnaptic 1 [Brassica
           oleracea var. alboglabra] GI:23506946; contains Pfam
           profile PF02301: HORMA domain
          Length = 1399

 Score = 26.6 bits (56), Expect = 8.9
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = -2

Query: 303 FTVFILFHLNEYRLVEFFS 247
           F+V+I FH+  YRL  FF+
Sbjct: 169 FSVYISFHIANYRLCYFFA 187


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,091,432
Number of Sequences: 28952
Number of extensions: 168939
Number of successful extensions: 334
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 333
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 334
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 838967680
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)