Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10o07
         (318 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L35848-1|AAA62319.1|  214|Homo sapiens IgE receptor beta subunit...    30   1.7  
D26350-1|BAA05384.1| 2701|Homo sapiens type 2 inositol 1,4,5-tri...    28   6.9  

>L35848-1|AAA62319.1|  214|Homo sapiens IgE receptor beta subunit
           protein.
          Length = 214

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 16/57 (28%), Positives = 29/57 (50%)
 Frame = +3

Query: 3   PVSTRIQKNLNTKLIHNFNNLIQFKTSNLKMITDIQLAVFSNILGVSIFLLVILYHY 173
           P S    + LNT + H  N    ++ + L+++  IQ+   + IL + +FL  + Y Y
Sbjct: 20  PGSETGPEELNTSVYHPINGSPDYQKAKLQVLGAIQILNAAMILALGVFLGSLQYPY 76


>D26350-1|BAA05384.1| 2701|Homo sapiens type 2 inositol
            1,4,5-trisphosphate receptor protein.
          Length = 2701

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = -1

Query: 255  KHIFLLETPMLLQWPRLTYIIWNYSHLCSD 166
            KH+ L  TP LL+   + +I  N  HLC++
Sbjct: 1258 KHLNLFLTPGLLEAETMRHIFMNNYHLCNE 1287


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,286,351
Number of Sequences: 237096
Number of extensions: 599512
Number of successful extensions: 4505
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 4505
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4505
length of database: 76,859,062
effective HSP length: 79
effective length of database: 58,128,478
effective search space used: 1511340428
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)