Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10o05
         (779 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          31   0.014
EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    25   0.90 
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    23   2.7  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    22   4.8  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    22   4.8  
S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Triboliu...    22   6.3  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    22   6.3  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    22   6.3  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   8.4  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   8.4  

>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 30.7 bits (66), Expect = 0.014
 Identities = 21/61 (34%), Positives = 35/61 (57%), Gaps = 4/61 (6%)
 Frame = -3

Query: 777 QYEQLVSSIEQQL-LVQS--DLIFPLHNDLNP-LNISNMSAKQIFQNLIVQHYQKIVATH 610
           + E L S ++++  +V S  D+I  +   LNP L +S +   QIF+NL+  HY++ V   
Sbjct: 352 EQETLKSQVQRESDVVDSLKDVIEIVDKLLNPDLGLSLLQVAQIFKNLLENHYEEFVRYE 411

Query: 609 L 607
           L
Sbjct: 412 L 412


>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 24.6 bits (51), Expect = 0.90
 Identities = 8/32 (25%), Positives = 21/32 (65%)
 Frame = -1

Query: 179 HFQVILSSDQNVDLKKKVPLTSMCYFIKYANE 84
           +F+ ++  D+  ++ ++V L  +C+ +K +NE
Sbjct: 385 YFESLVRGDERFEITEEVVLGLVCFRLKASNE 416


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 15/57 (26%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
 Frame = +3

Query: 549 IHYEMKVDFKELDYMPNTEEDELQLSSGNVELSNFGKSALHSCLIY--LGDLSRYAV 713
           I +E++ ++  +D   N +   LQL    V+ S  G   +   L+Y  +G ++ Y V
Sbjct: 323 ILHELRNNYFHMDLENNVQSYSLQLLHQKVQFSVLGFFVVDYTLLYSIVGAVTTYLV 379


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -3

Query: 384 LETVTSHNCPSAFVSGLQC 328
           L T+T H   +  VSGL+C
Sbjct: 121 LNTLTFHTSSNLTVSGLRC 139


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -3

Query: 384 LETVTSHNCPSAFVSGLQC 328
           L T+T H   +  VSGL+C
Sbjct: 121 LNTLTFHTSSNLTVSGLRC 139


>S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Tribolium
           castaneum homeodomainprotein mRNA, complete cds. ).
          Length = 327

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = -1

Query: 530 KITNSTLDEGEQEMVMLTISS 468
           +ITNSTLD G +      ISS
Sbjct: 54  QITNSTLDPGRKSPSSPRISS 74


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = -3

Query: 741 LLVQSDLIFPLHNDLNPLNISNMSAKQIF 655
           L + +D+I   + +LN + + NMS   +F
Sbjct: 167 LYLITDMILMRYKELNRVILDNMSRNHLF 195


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +3

Query: 690 GDLSRYAVEISNHFEPTIAARYY 758
           GDL    V +S H+ P  +A  Y
Sbjct: 262 GDLDELIVTLSTHYFPVFSACDY 284


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = -3

Query: 72  YYHFPNELYRSMHFPC 25
           YYHF  ELY  +   C
Sbjct: 122 YYHFTLELYTVLGAAC 137


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = -3

Query: 72  YYHFPNELYRSMHFPC 25
           YYHF  ELY  +   C
Sbjct: 122 YYHFTLELYTVLGAAC 137


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 183,126
Number of Sequences: 336
Number of extensions: 4082
Number of successful extensions: 15
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21065107
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)