Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10o05
         (779 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_0592 + 22585546-22588573,22588680-22589032                       29   4.1  
08_02_0113 - 12715888-12716181,12717443-12717602,12718327-127183...    29   5.5  
07_03_1150 - 24375859-24376050,24376173-24376283,24376488-243766...    29   5.5  
09_02_0602 - 11118788-11119178,11119262-11119451,11119590-111196...    28   7.2  

>06_03_0592 + 22585546-22588573,22588680-22589032
          Length = 1126

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = -2

Query: 376 SNFSQLSLSFCLWTSMLVVKRSATNLLVVDMS 281
           S++S  SL+FC W  +    RS   ++ +D+S
Sbjct: 52  SSWSNTSLNFCNWDGVTCSSRSPPRVIAIDLS 83


>08_02_0113 -
           12715888-12716181,12717443-12717602,12718327-12718368,
           12718443-12718465,12718616-12720653,12720736-12720965,
           12722207-12722329,12722438-12723010,12724684-12724733,
           12726828-12726923,12726987-12727394,12727609-12727795
          Length = 1407

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 18/44 (40%), Positives = 26/44 (59%), Gaps = 5/44 (11%)
 Frame = +3

Query: 654 GKSALHSCLIYLGDLSRYA-----VEISNHFEPTIAARYYLQAA 770
           G  + + CLIYLGDL+RY      V+ ++  E   A+ YY +AA
Sbjct: 384 GLLSCYRCLIYLGDLTRYKGLYGDVDYASR-EYAAASIYYKEAA 426


>07_03_1150 -
           24375859-24376050,24376173-24376283,24376488-24376655,
           24376850-24377451,24377546-24377648,24378461-24378610,
           24379918-24379956
          Length = 454

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 15/58 (25%), Positives = 35/58 (60%)
 Frame = +3

Query: 534 HFLDRIHYEMKVDFKELDYMPNTEEDELQLSSGNVELSNFGKSALHSCLIYLGDLSRY 707
           H+++++  E++  ++E+DY+ +      QL+  NVE +  G+  +HS  + L +L ++
Sbjct: 81  HYIEKLETELRNCYQEIDYLQD------QLNIRNVEANIMGEH-IHSLELKLTELEKF 131


>09_02_0602 -
           11118788-11119178,11119262-11119451,11119590-11119658,
           11119890-11120016,11120134-11120399,11120760-11120872,
           11121693-11121764,11121860-11121998,11124277-11124360,
           11125278-11125771,11127604-11128187
          Length = 842

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 13/45 (28%), Positives = 25/45 (55%)
 Frame = -3

Query: 720 IFPLHNDLNPLNISNMSAKQIFQNLIVQHYQKIVATHLLQYWAYN 586
           + P  N+ + L+I   + K+I + L++ HY    +T   Q+ AY+
Sbjct: 244 VVPADNNKSVLSIIQTNDKEIHEYLVLVHYADFQSTLQRQFQAYS 288


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,703,068
Number of Sequences: 37544
Number of extensions: 353295
Number of successful extensions: 807
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 787
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 807
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2091906552
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)