Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10o04
         (397 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    23   1.7  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    23   1.7  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   1.7  
DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           21   5.1  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    21   6.8  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    21   6.8  

>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 22.6 bits (46), Expect = 1.7
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -2

Query: 285 NVLACIVVSNQPSLHT 238
           N++ CIV+   PS+ T
Sbjct: 51  NIITCIVIWRNPSMQT 66


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 22.6 bits (46), Expect = 1.7
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -2

Query: 285 NVLACIVVSNQPSLHT 238
           NV  C+V++   S+HT
Sbjct: 71  NVSTCVVIARNKSMHT 86


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 22.6 bits (46), Expect = 1.7
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -2

Query: 153 HNVLHYIETTGPPVHARARP 94
           H  LH+ ++T P   A+A+P
Sbjct: 811 HQQLHHHQSTHPQAQAQAQP 830


>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 21.0 bits (42), Expect = 5.1
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -2

Query: 372 AILGADFLTSNNL 334
           AI   DF+T NNL
Sbjct: 176 AIFDGDFITENNL 188


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 20.6 bits (41), Expect = 6.8
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = +1

Query: 79  KNGCQWSSTSMHRWTSSFNIMQNVM 153
           K GC   + +  RW S+F I   V+
Sbjct: 498 KRGCYQLAINHIRWNSAFAIAPAVI 522


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 20.6 bits (41), Expect = 6.8
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = +1

Query: 79  KNGCQWSSTSMHRWTSSFNIMQNVM 153
           K GC   + +  RW S+F I   V+
Sbjct: 588 KRGCYQLAINHIRWNSAFAIAPAVI 612


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,826
Number of Sequences: 438
Number of extensions: 1775
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used:  9761793
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)