Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10o01
         (752 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81518-1|CAB04214.3|  601|Caenorhabditis elegans Hypothetical pr...    31   0.88 
Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical pr...    30   1.5  
X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy ch...    30   1.5  
AF067949-1|AAC19236.2| 1446|Caenorhabditis elegans Suppressor of...    29   2.7  
AC024755-10|ABS19458.1|  245|Caenorhabditis elegans Hypothetical...    29   2.7  
AF022967-5|AAB69878.1|  537|Caenorhabditis elegans Hypothetical ...    28   6.2  
Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical p...    28   8.2  
Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical pr...    28   8.2  
J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy ch...    28   8.2  
AL032660-2|CAA21751.1|  690|Caenorhabditis elegans Hypothetical ...    28   8.2  

>Z81518-1|CAB04214.3|  601|Caenorhabditis elegans Hypothetical
           protein F28D9.1 protein.
          Length = 601

 Score = 31.1 bits (67), Expect = 0.88
 Identities = 17/43 (39%), Positives = 26/43 (60%)
 Frame = +2

Query: 398 KRPNDGNRGNESVDVTAEKDNALNKYKTRLEAIKKILREKRAK 526
           +RPND +  + SVD  AE++    K K   +A KK  +EK++K
Sbjct: 542 RRPNDTD-SDVSVDSEAEEERRRKKAKKEKKAAKKHKKEKKSK 583


>Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical protein
            K12F2.1 protein.
          Length = 1969

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 27/99 (27%), Positives = 46/99 (46%), Gaps = 6/99 (6%)
 Frame = +2

Query: 398  KRPNDGNRG-NESVDVTAEKDNALNKYKTRLEAI-----KKILREKRAKMKTLESEGKPN 559
            K   + NR  NE +    +K N L K + +LE       + I REKR++   +E   +  
Sbjct: 1010 KHQEESNRKLNEDLQSEEDKVNHLEKIRNKLEQQMDELEENIDREKRSR-GDIEKAKRKV 1068

Query: 560  KS*FSIARVQFS*KD*ITKSDNDIDTVININKIDIPHYN 676
            +    +A+      D ITK  +D++T +   + D+ H N
Sbjct: 1069 EGDLKVAQENI---DEITKQKHDVETTLKRKEEDLHHTN 1104


>X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy chain 3
            protein.
          Length = 1969

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 27/99 (27%), Positives = 46/99 (46%), Gaps = 6/99 (6%)
 Frame = +2

Query: 398  KRPNDGNRG-NESVDVTAEKDNALNKYKTRLEAI-----KKILREKRAKMKTLESEGKPN 559
            K   + NR  NE +    +K N L K + +LE       + I REKR++   +E   +  
Sbjct: 1010 KHQEESNRKLNEDLQSEEDKVNHLEKIRNKLEQQMDELEENIDREKRSR-GDIEKAKRKV 1068

Query: 560  KS*FSIARVQFS*KD*ITKSDNDIDTVININKIDIPHYN 676
            +    +A+      D ITK  +D++T +   + D+ H N
Sbjct: 1069 EGDLKVAQENI---DEITKQKHDVETTLKRKEEDLHHTN 1104


>AF067949-1|AAC19236.2| 1446|Caenorhabditis elegans Suppressor of
           constitutive dauerformation protein 2 protein.
          Length = 1446

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 18/65 (27%), Positives = 29/65 (44%), Gaps = 7/65 (10%)
 Frame = +2

Query: 158 IYKTKMIGAFKRNEDILSRNFYKD-INIEQHQN------YLLKEETEKSSETFIKTNPMC 316
           +++  ++GA   NE    R +Y D   IE  +N      Y+  E   K++E F    P C
Sbjct: 12  LFRVTLVGAILPNETFDVRRYYADRFLIEDEENGSSRSYYISAESKAKAAEQFALLAPNC 71

Query: 317 DLNCI 331
            L  +
Sbjct: 72  SLTSV 76


>AC024755-10|ABS19458.1|  245|Caenorhabditis elegans Hypothetical
           protein Y34B4A.2 protein.
          Length = 245

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 19/70 (27%), Positives = 38/70 (54%)
 Frame = +2

Query: 449 EKDNALNKYKTRLEAIKKILREKRAKMKTLESEGKPNKS*FSIARVQFS*KD*ITKSDND 628
           EK+     YKT++E ++K++  KR  +   E + K +K  +   ++    +   T++DN+
Sbjct: 63  EKEVKCKSYKTQIEMVQKLILAKRRII--YEVQEKIDKKNYDKMKLVEKTEGLGTQADNN 120

Query: 629 IDTVININKI 658
           +DT +   KI
Sbjct: 121 VDTKLKNIKI 130


>AF022967-5|AAB69878.1|  537|Caenorhabditis elegans Hypothetical
           protein C13A2.6 protein.
          Length = 537

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 29/124 (23%), Positives = 51/124 (41%), Gaps = 2/124 (1%)
 Frame = +2

Query: 188 KRNEDILSRNFYKDINIEQHQNYLLKEETEKSSETFIKTNPMCDLNCIYYSFIKEKFRIA 367
           +R  + +    +   + +   + L    T K  +  +K     +   I+YS+  E  R  
Sbjct: 334 RREHEFIKAKSFAGFSFKDIVSNLSSSTTVKRGKVVVKPERY-NSTWIHYSYHDENRREI 392

Query: 368 FNGILLSYFTKRPNDGNRGNESVDVTAEKDNALNK--YKTRLEAIKKILREKRAKMKTLE 541
            +  L+    +RP D N  NE  DV      ALN+    + +EAI + L + R   K ++
Sbjct: 393 ESPNLVH--VQRPLDENSDNEMTDVWQIDFGALNETIRSSDIEAIDRDLAKIRKSSKVMK 450

Query: 542 SEGK 553
              K
Sbjct: 451 IASK 454


>Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical
            protein F11C3.3 protein.
          Length = 1963

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 16/47 (34%), Positives = 25/47 (53%)
 Frame = +2

Query: 407  NDGNRGNESVDVTAEKDNALNKYKTRLEAIKKILREKRAKMKTLESE 547
            ND    NE  D TA+   A  K +  +EA+KK +++    ++  ESE
Sbjct: 932  NDQLADNE--DRTADVQRAKKKIEAEVEALKKQIQDLEMSLRKAESE 976


>Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical protein
            F11C3.3 protein.
          Length = 1963

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 16/47 (34%), Positives = 25/47 (53%)
 Frame = +2

Query: 407  NDGNRGNESVDVTAEKDNALNKYKTRLEAIKKILREKRAKMKTLESE 547
            ND    NE  D TA+   A  K +  +EA+KK +++    ++  ESE
Sbjct: 932  NDQLADNE--DRTADVQRAKKKIEAEVEALKKQIQDLEMSLRKAESE 976


>J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy chain
            protein.
          Length = 1966

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 16/47 (34%), Positives = 25/47 (53%)
 Frame = +2

Query: 407  NDGNRGNESVDVTAEKDNALNKYKTRLEAIKKILREKRAKMKTLESE 547
            ND    NE  D TA+   A  K +  +EA+KK +++    ++  ESE
Sbjct: 935  NDQLADNE--DRTADVQRAKKKIEAEVEALKKQIQDLEMSLRKAESE 979


>AL032660-2|CAA21751.1|  690|Caenorhabditis elegans Hypothetical
           protein Y70G10A.3 protein.
          Length = 690

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 12/42 (28%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
 Frame = +2

Query: 221 YKDINIEQHQNYLLKEETEKSSETFIKTNPMCDLNC--IYYS 340
           Y+D++IE+  ++ +           ++ NP+CD N   +YYS
Sbjct: 436 YEDLSIEKMHDFSISSTCNADCHCKMEWNPVCDRNTGHMYYS 477


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,719,428
Number of Sequences: 27780
Number of extensions: 311698
Number of successful extensions: 943
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 888
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 943
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1788025660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)