Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10o01
         (752 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At3g07160.1 68416.m00853 glycosyl transferase family 48 protein ...    30   1.4  
At3g28630.1 68416.m03573 expressed protein  contains Pfam profil...    30   1.9  
At3g02930.1 68416.m00288 expressed protein  ; expression support...    29   3.3  
At2g34980.1 68415.m04292 phosphatidylinositolglycan synthase fam...    29   3.3  
At1g61690.1 68414.m06958 tetratricopeptide repeat (TPR)-containi...    29   3.3  
At2g41000.1 68415.m05064 DNAJ heat shock N-terminal domain-conta...    29   4.4  
At4g19530.1 68417.m02873 disease resistance protein (TIR-NBS-LRR...    28   5.8  

>At3g07160.1 68416.m00853 glycosyl transferase family 48 protein
           similar to glucan synthase GB:AAD11794 [Filobasidiella
           neoformans var. neoformans]
          Length = 1931

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 16/58 (27%), Positives = 29/58 (50%)
 Frame = +2

Query: 119 MALKTGLMEITSNIYKTKMIGAFKRNEDILSRNFYKDINIEQHQNYLLKEETEKSSET 292
           +  KTGLM +       + +G   R++DIL    +  +  E++    LKEE ++  E+
Sbjct: 88  LQFKTGLMSVIKQKLAKREVGTIDRSQDILRLQEFYRLYREKNNVDTLKEEEKQLRES 145


>At3g28630.1 68416.m03573 expressed protein  contains Pfam profile:
           PF04601 protein of unknown function (DUF569
          Length = 335

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 18/55 (32%), Positives = 29/55 (52%)
 Frame = +2

Query: 119 MALKTGLMEITSNIYKTKMIGAFKRNEDILSRNFYKDINIEQHQNYLLKEETEKS 283
           +A+K  L +I   +YK  ++  FK+ E +  R++        H  YLL EE E+S
Sbjct: 14  VAIKRSLFQIFVILYKRTIMEIFKKAETVRLRSY--------HDKYLLAEEDEES 60


>At3g02930.1 68416.m00288 expressed protein  ; expression supported
           by MPSS
          Length = 806

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = +2

Query: 425 NESVDVTAEKDNALNKYKTRLEAIKKILREKRAKMKTLES 544
           NE   V  EK  AL K +    +++++L EK+  +  LES
Sbjct: 404 NELETVNEEKTQALKKEQDATSSVQRLLEEKKKILSELES 443


>At2g34980.1 68415.m04292 phosphatidylinositolglycan synthase family
           protein similar to SP|Q92535 Phosphatidylinositol-glycan
           biosynthesis, class C protein (PIG-C) {Homo sapiens}
          Length = 303

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 16/34 (47%), Positives = 20/34 (58%)
 Frame = -3

Query: 552 LPSDSRVFILALFSLKIFLIASKRVLYLFKALSF 451
           LPS   VF + LFSL++FL A   V Y  K  +F
Sbjct: 202 LPSRLHVFAVMLFSLQVFLFA-PLVTYCIKKFNF 234


>At1g61690.1 68414.m06958 tetratricopeptide repeat (TPR)-containing
           protein contains Pfam profile PF00515: TPR Domain
          Length = 1155

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
 Frame = +2

Query: 425 NESVDVT-AEKDNALNKYKTRLEAIKKILREKRAKMKTLESEGKPNKS 565
           +E+VD T AE+D +L        AI+K L   + K  TL  EGK N++
Sbjct: 454 SETVDTTRAERDTSLKPPPRSRLAIQKELLAVKKKALTLRREGKFNEA 501


>At2g41000.1 68415.m05064 DNAJ heat shock N-terminal
           domain-containing protein similar to SP|O75190 DnaJ
           homolog subfamily B member 6 (Heat shock protein J2)
           Homo sapiens; contains Pfam profile PF00226 DnaJ domain
          Length = 275

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 15/43 (34%), Positives = 22/43 (51%)
 Frame = -2

Query: 640 DCINVIIRLGYLVFLRELNPSYAKSRLIRFAFRFEGFHFSPFL 512
           DC+N  +  GY   + +LN      R +RF FRF+   F P +
Sbjct: 56  DCLNFCLIRGYAEAVADLN-----FRCLRFRFRFDRLKFFPMV 93


>At4g19530.1 68417.m02873 disease resistance protein (TIR-NBS-LRR
           class), putative domain signature TIR-NBS-LRR exists,
           suggestive of a disease resistance protein.
          Length = 1167

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 16/49 (32%), Positives = 24/49 (48%)
 Frame = +2

Query: 410 DGNRGNESVDVTAEKDNALNKYKTRLEAIKKILREKRAKMKTLESEGKP 556
           D  RG E  +  A+K + LN+    LE    I  +KR + + +E  G P
Sbjct: 190 DQGRGEEVEEAKADKISGLNQRLKELEEKVAITGDKRDETRIVEVVGMP 238


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,404,115
Number of Sequences: 28952
Number of extensions: 271656
Number of successful extensions: 677
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 659
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 676
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1672953192
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)