Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10n21
         (488 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    21   5.3  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    21   5.3  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    21   5.3  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          21   7.0  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      21   7.0  
DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex det...    21   7.0  
DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex det...    21   7.0  
DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex det...    21   7.0  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    21   7.0  
DQ325081-1|ABD14095.1|  186|Apis mellifera complementary sex det...    21   9.3  

>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 21.4 bits (43), Expect = 5.3
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = +3

Query: 183 GSSQHKYFYSKPEQIVKSMRKILEKYKH 266
           GSS+        EQ+ +++R+ +E Y H
Sbjct: 425 GSSKDFKTTRTREQVTEALRRFVEGYPH 452


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 21.4 bits (43), Expect = 5.3
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = +3

Query: 183 GSSQHKYFYSKPEQIVKSMRKILEKYKH 266
           GSS+        EQ+ +++R+ +E Y H
Sbjct: 340 GSSKDFKTTRTREQVTEALRRFVEGYPH 367


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 21.4 bits (43), Expect = 5.3
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = +3

Query: 183 GSSQHKYFYSKPEQIVKSMRKILEKYKH 266
           GSS+        EQ+ +++R+ +E Y H
Sbjct: 659 GSSKDFKTTRTREQVTEALRRFVEGYPH 686


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 21.0 bits (42), Expect = 7.0
 Identities = 5/9 (55%), Positives = 8/9 (88%)
 Frame = -1

Query: 146 WRQEYYPGY 120
           W++ +YPGY
Sbjct: 287 WQKPFYPGY 295


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 21.0 bits (42), Expect = 7.0
 Identities = 5/9 (55%), Positives = 8/9 (88%)
 Frame = -1

Query: 146 WRQEYYPGY 120
           W++ +YPGY
Sbjct: 287 WQKPFYPGY 295


>DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 21.0 bits (42), Expect = 7.0
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = +1

Query: 244 KYSKNTNTNNSMLKRYLIHIRCMENMQI 327
           KY+ N N  N+  K+   +I  +E + I
Sbjct: 97  KYNYNNNNYNNNCKKLYYNINYIEQIPI 124


>DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 21.0 bits (42), Expect = 7.0
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = +1

Query: 244 KYSKNTNTNNSMLKRYLIHIRCMENMQI 327
           KY+ N N  N+  K+   +I  +E + I
Sbjct: 97  KYNYNNNNYNNNCKKLYYNINYIEQIPI 124


>DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 21.0 bits (42), Expect = 7.0
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = +1

Query: 244 KYSKNTNTNNSMLKRYLIHIRCMENMQI 327
           KY+ N N  N+  K+   +I  +E + I
Sbjct: 97  KYNYNNNNYNNNCKKLYYNINYIEQIPI 124


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 21.0 bits (42), Expect = 7.0
 Identities = 10/35 (28%), Positives = 16/35 (45%)
 Frame = +3

Query: 168 IYNEDGSSQHKYFYSKPEQIVKSMRKILEKYKHEQ 272
           I+ ++ +    YFYSK      S   +L K   E+
Sbjct: 131 IFPQENNYNDNYFYSKSNGSNSSNSDVLFKQNKEE 165


>DQ325081-1|ABD14095.1|  186|Apis mellifera complementary sex
           determiner protein.
          Length = 186

 Score = 20.6 bits (41), Expect = 9.3
 Identities = 8/28 (28%), Positives = 15/28 (53%)
 Frame = +1

Query: 244 KYSKNTNTNNSMLKRYLIHIRCMENMQI 327
           KY+ N N  N+  K+   +I  +E + +
Sbjct: 97  KYNYNNNNYNNNCKKLYYNINYIEQIPV 124


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,437
Number of Sequences: 438
Number of extensions: 2957
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13421061
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)