Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10n20
         (698 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    24   1.4  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    24   1.4  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    23   1.8  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    23   1.8  

>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
 Frame = +2

Query: 155 MMV*NLIKITKAVIL*LS*WKML-KRFLTIYTKL 253
           + V NL+ + K+  L ++ WKML K F  I +KL
Sbjct: 482 LSVLNLLSVIKSSFLDINTWKMLVKSFDAIDSKL 515


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 11/29 (37%), Positives = 20/29 (68%), Gaps = 2/29 (6%)
 Frame = +1

Query: 604 RRSCIACDNIMAKDC-SDPKNK-LVPSIL 684
           R +C+ C N++A+ C SD   + L+P++L
Sbjct: 500 RMTCLFCINVLAEACGSDITTRLLLPTVL 528


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
 Frame = +1

Query: 100 NNNKYLPSFRIHAEESDHYDGVKSHKDNESS-NLVAFLVEN 219
           NN    P   +  E SD+Y+       +ESS N VA   EN
Sbjct: 459 NNAIMTPPASVQTESSDNYNSFHQFYSSESSQNQVAPTGEN 499


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
 Frame = +1

Query: 100 NNNKYLPSFRIHAEESDHYDGVKSHKDNESS-NLVAFLVEN 219
           NN    P   +  E SD+Y+       +ESS N VA   EN
Sbjct: 407 NNAIMTPPASVQTESSDNYNSFHQFYSSESSQNQVAPTGEN 447


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.317    0.129    0.361 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,624
Number of Sequences: 336
Number of extensions: 2556
Number of successful extensions: 11
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)