Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10n20
         (698 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L40157-1|AAA79121.1| 1410|Homo sapiens endosome-associated prote...    40   0.011
X78998-1|CAA55632.1| 1411|Homo sapiens endosomal protein protein.      38   0.046

>L40157-1|AAA79121.1| 1410|Homo sapiens endosome-associated protein
            protein.
          Length = 1410

 Score = 39.5 bits (88), Expect = 0.011
 Identities = 45/187 (24%), Positives = 78/187 (41%), Gaps = 3/187 (1%)
 Frame = +1

Query: 127  RIHAEESDHYDGVKSHKDNESSNLVAFLVENVKKIFDDLHETTSIIDRSFEKLDTLSEVQ 306
            ++H+E  +   G+K H++NE     A L   +  + ++L         S  ++  L E Q
Sbjct: 1217 KLHSEIKEKEVGMKKHEENE-----AKLTMQITALNENLGTVKKEWQSSQRRVSEL-EKQ 1270

Query: 307  TQTLXXXXXXXXXXI--NVEKSSEATTYNTKIAGKVDKAYIKVTK-RRKVNDATTINYQI 477
            T  L          +  N ++         K  G+++K   KV + +RK+++ T +    
Sbjct: 1271 TDDLRGEIAVLEATVQNNQDERRALLERCLKGEGEIEKLQTKVLELQRKLDNTTAVQELG 1330

Query: 478  HLSRDLMYHKTSSLAEQLTNRAENNTNCNLLYESQLERFAHRRRSCIACDNIMAKDCSDP 657
              ++ L    T +L  +    AE+N   N +   +      RR  C  C NI   +CS  
Sbjct: 1331 RENQSLQIKHTQALNRKW---AEDNEVQNCMACGKGFSVTVRRHHCRQCGNIFCAECS-A 1386

Query: 658  KNKLVPS 678
            KN L PS
Sbjct: 1387 KNALTPS 1393


>X78998-1|CAA55632.1| 1411|Homo sapiens endosomal protein protein.
          Length = 1411

 Score = 37.5 bits (83), Expect = 0.046
 Identities = 45/186 (24%), Positives = 73/186 (39%), Gaps = 2/186 (1%)
 Frame = +1

Query: 127  RIHAEESDHYDGVKSHKDNESSNLVAFLVENVKKIFDDLHETTSIIDRSFEKLDTLSEVQ 306
            ++H+E  +   G+K H++NE     A L   +  + ++L         S  ++  L E Q
Sbjct: 1217 KLHSEIKEKEVGMKKHEENE-----AKLTMQITALNENLGTVKKEWQSSQRRVSEL-EKQ 1270

Query: 307  TQTLXXXXXXXXXXI--NVEKSSEATTYNTKIAGKVDKAYIKVTKRRKVNDATTINYQIH 480
            T  L          +  N ++         K  G+++K   KV + ++  D TT   Q  
Sbjct: 1271 TDDLRGEIAVLEATVQNNQDERRALLERCLKGEGEIEKLQTKVLELQRKLDNTTAAVQ-E 1329

Query: 481  LSRDLMYHKTSSLAEQLTNRAENNTNCNLLYESQLERFAHRRRSCIACDNIMAKDCSDPK 660
            L R+    +           AE+N   N +   +      RR  C  C NI   +CS  K
Sbjct: 1330 LGRENQSLQIKHTQALNRKWAEDNEVQNCMACGKGFSVTVRRHHCRQCGNIFCAECS-AK 1388

Query: 661  NKLVPS 678
            N L PS
Sbjct: 1389 NALTPS 1394


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.317    0.129    0.361 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,048,148
Number of Sequences: 237096
Number of extensions: 1209575
Number of successful extensions: 2844
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2754
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2842
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8063224416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)