Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10n20
         (698 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z48585-6|CAA88481.1|  284|Caenorhabditis elegans Hypothetical pr...    30   1.4  
AC024777-3|AAF60562.3|  563|Caenorhabditis elegans Hypothetical ...    30   1.4  
AL132895-2|CAC14404.1|  613|Caenorhabditis elegans Hypothetical ...    28   5.6  
Z99282-2|CAB16533.1|  613|Caenorhabditis elegans Hypothetical pr...    27   9.8  
Z83129-12|CAB05645.1|  613|Caenorhabditis elegans Hypothetical p...    27   9.8  

>Z48585-6|CAA88481.1|  284|Caenorhabditis elegans Hypothetical
           protein ZK673.6 protein.
          Length = 284

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 13/52 (25%), Positives = 24/52 (46%)
 Frame = +1

Query: 133 HAEESDHYDGVKSHKDNESSNLVAFLVENVKKIFDDLHETTSIIDRSFEKLD 288
           H EE   YD      D+       F  + +KK++ D+ +T    +R  +K++
Sbjct: 127 HKEEQHFYDIKNVDHDSNIYTTTVFYCDKIKKMYSDVEKTVKTCNRRRKKVE 178


>AC024777-3|AAF60562.3|  563|Caenorhabditis elegans Hypothetical
           protein Y42H9AR.3 protein.
          Length = 563

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 15/47 (31%), Positives = 21/47 (44%)
 Frame = +1

Query: 172 HKDNESSNLVAFLVENVKKIFDDLHETTSIIDRSFEKLDTLSEVQTQ 312
           H + +SS+L    V NVK  FD        +D      D  S V+T+
Sbjct: 44  HPEEDSSDLAGMFVSNVKGFFDKAKRGIQKLDAKKSIADLASNVETE 90


>AL132895-2|CAC14404.1|  613|Caenorhabditis elegans Hypothetical
           protein Y59A8A.2 protein.
          Length = 613

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
 Frame = +1

Query: 502 HKTSSLAEQLTNRAENNTNCNLLYESQLERFAH-RRRSCIAC-DNIMAK 642
           H   +L     N A+ +T C + +E  L+  AH  RR+C AC D I A+
Sbjct: 186 HAICALYTHGVNYAQTHTRCGVSWE-HLDNNAHFGRRTCTACTDKIEAR 233


>Z99282-2|CAB16533.1|  613|Caenorhabditis elegans Hypothetical
           protein W06G6.1 protein.
          Length = 613

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = -1

Query: 605 RRCANLSNCDSYNKLQFVLFSARFVSCSARD 513
           R C +L     YN+L   LF+ARF  C  +D
Sbjct: 85  RSCQHLDLPKLYNQLGSKLFTARFAKCVHQD 115


>Z83129-12|CAB05645.1|  613|Caenorhabditis elegans Hypothetical
           protein W06G6.1 protein.
          Length = 613

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = -1

Query: 605 RRCANLSNCDSYNKLQFVLFSARFVSCSARD 513
           R C +L     YN+L   LF+ARF  C  +D
Sbjct: 85  RSCQHLDLPKLYNQLGSKLFTARFAKCVHQD 115


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.317    0.129    0.361 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,540,916
Number of Sequences: 27780
Number of extensions: 227610
Number of successful extensions: 860
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 824
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 860
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)