SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10n17
         (652 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC010619-1|AAH10619.1|  337|Homo sapiens MOCO sulphurase C-termi...    57   6e-08
AL606726-4|CAH71881.1|  337|Homo sapiens MOCO sulphurase C-termi...    57   6e-08
AL445423-3|CAH72119.1|  337|Homo sapiens MOCO sulphurase C-termi...    57   6e-08
BC016859-1|AAH16859.1|  335|Homo sapiens MOCO sulphurase C-termi...    56   8e-08
BC011973-1|AAH11973.1|  335|Homo sapiens MOCO sulphurase C-termi...    56   8e-08
AL606726-2|CAH71879.1|  257|Homo sapiens MOCO sulphurase C-termi...    56   8e-08
AL606726-1|CAH71878.1|  335|Homo sapiens MOCO sulphurase C-termi...    56   8e-08
AL359353-2|CAH70304.1|  257|Homo sapiens MOCO sulphurase C-termi...    56   8e-08
AL359353-1|CAH70303.1|  335|Homo sapiens MOCO sulphurase C-termi...    56   8e-08
U80457-1|AAB62397.1|  570|Homo sapiens transcription factor SIM2...    31   2.7  
U80456-1|AAB62396.1|  667|Homo sapiens transcription factor SIM2...    31   2.7  
BC110444-1|AAI10445.1|  570|Homo sapiens single-minded homolog 2...    31   2.7  
AP000697-1|BAA89433.1|  667|Homo sapiens single-minded 2 protein...    31   2.7  
AJ001858-1|CAA05055.1|  463|Homo sapiens human SIM2 protein.           31   2.7  

>BC010619-1|AAH10619.1|  337|Homo sapiens MOCO sulphurase C-terminal
           domain containing 1 protein.
          Length = 337

 Score = 56.8 bits (131), Expect = 6e-08
 Identities = 26/60 (43%), Positives = 40/60 (66%)
 Frame = +2

Query: 428 KVGTLKAINAYPIKSCAPVMLEKAECSILGLKDGWLXDRVVMVIDEKNXFVTARAFPELL 607
           +VGT+  +  YP+KSC  V + +AEC+ +GL+ G L DR  +VI+++   VTAR  P L+
Sbjct: 54  QVGTVAQLWIYPVKSCKGVPVSEAECTAMGLRSGNLRDRFWLVINQEGNMVTARQEPRLV 113


>AL606726-4|CAH71881.1|  337|Homo sapiens MOCO sulphurase C-terminal
           domain containing 1 protein.
          Length = 337

 Score = 56.8 bits (131), Expect = 6e-08
 Identities = 26/60 (43%), Positives = 40/60 (66%)
 Frame = +2

Query: 428 KVGTLKAINAYPIKSCAPVMLEKAECSILGLKDGWLXDRVVMVIDEKNXFVTARAFPELL 607
           +VGT+  +  YP+KSC  V + +AEC+ +GL+ G L DR  +VI+++   VTAR  P L+
Sbjct: 54  QVGTVAQLWIYPVKSCKGVPVSEAECTAMGLRSGNLRDRFWLVINQEGNMVTARQEPRLV 113


>AL445423-3|CAH72119.1|  337|Homo sapiens MOCO sulphurase C-terminal
           domain containing 1 protein.
          Length = 337

 Score = 56.8 bits (131), Expect = 6e-08
 Identities = 26/60 (43%), Positives = 40/60 (66%)
 Frame = +2

Query: 428 KVGTLKAINAYPIKSCAPVMLEKAECSILGLKDGWLXDRVVMVIDEKNXFVTARAFPELL 607
           +VGT+  +  YP+KSC  V + +AEC+ +GL+ G L DR  +VI+++   VTAR  P L+
Sbjct: 54  QVGTVAQLWIYPVKSCKGVPVSEAECTAMGLRSGNLRDRFWLVINQEGNMVTARQEPRLV 113


>BC016859-1|AAH16859.1|  335|Homo sapiens MOCO sulphurase C-terminal
           domain containing 2 protein.
          Length = 335

 Score = 56.4 bits (130), Expect = 8e-08
 Identities = 27/60 (45%), Positives = 38/60 (63%)
 Frame = +2

Query: 428 KVGTLKAINAYPIKSCAPVMLEKAECSILGLKDGWLXDRVVMVIDEKNXFVTARAFPELL 607
           +VGT+  +  YP+KSC  V + +AEC+ +GL+ G L DR  +VI E    VTAR  P L+
Sbjct: 53  QVGTVAKLWIYPVKSCKGVPVSEAECTAMGLRSGNLRDRFWLVIKEDGHMVTARQEPRLV 112


>BC011973-1|AAH11973.1|  335|Homo sapiens MOCO sulphurase C-terminal
           domain containing 2 protein.
          Length = 335

 Score = 56.4 bits (130), Expect = 8e-08
 Identities = 27/60 (45%), Positives = 38/60 (63%)
 Frame = +2

Query: 428 KVGTLKAINAYPIKSCAPVMLEKAECSILGLKDGWLXDRVVMVIDEKNXFVTARAFPELL 607
           +VGT+  +  YP+KSC  V + +AEC+ +GL+ G L DR  +VI E    VTAR  P L+
Sbjct: 53  QVGTVAKLWIYPVKSCKGVPVSEAECTAMGLRSGNLRDRFWLVIKEDGHMVTARQEPRLV 112


>AL606726-2|CAH71879.1|  257|Homo sapiens MOCO sulphurase C-terminal
           domain containing 2 protein.
          Length = 257

 Score = 56.4 bits (130), Expect = 8e-08
 Identities = 27/60 (45%), Positives = 38/60 (63%)
 Frame = +2

Query: 428 KVGTLKAINAYPIKSCAPVMLEKAECSILGLKDGWLXDRVVMVIDEKNXFVTARAFPELL 607
           +VGT+  +  YP+KSC  V + +AEC+ +GL+ G L DR  +VI E    VTAR  P L+
Sbjct: 53  QVGTVAKLWIYPVKSCKGVPVSEAECTAMGLRSGNLRDRFWLVIKEDGHMVTARQEPRLV 112


>AL606726-1|CAH71878.1|  335|Homo sapiens MOCO sulphurase C-terminal
           domain containing 2 protein.
          Length = 335

 Score = 56.4 bits (130), Expect = 8e-08
 Identities = 27/60 (45%), Positives = 38/60 (63%)
 Frame = +2

Query: 428 KVGTLKAINAYPIKSCAPVMLEKAECSILGLKDGWLXDRVVMVIDEKNXFVTARAFPELL 607
           +VGT+  +  YP+KSC  V + +AEC+ +GL+ G L DR  +VI E    VTAR  P L+
Sbjct: 53  QVGTVAKLWIYPVKSCKGVPVSEAECTAMGLRSGNLRDRFWLVIKEDGHMVTARQEPRLV 112


>AL359353-2|CAH70304.1|  257|Homo sapiens MOCO sulphurase C-terminal
           domain containing 2 protein.
          Length = 257

 Score = 56.4 bits (130), Expect = 8e-08
 Identities = 27/60 (45%), Positives = 38/60 (63%)
 Frame = +2

Query: 428 KVGTLKAINAYPIKSCAPVMLEKAECSILGLKDGWLXDRVVMVIDEKNXFVTARAFPELL 607
           +VGT+  +  YP+KSC  V + +AEC+ +GL+ G L DR  +VI E    VTAR  P L+
Sbjct: 53  QVGTVAKLWIYPVKSCKGVPVSEAECTAMGLRSGNLRDRFWLVIKEDGHMVTARQEPRLV 112


>AL359353-1|CAH70303.1|  335|Homo sapiens MOCO sulphurase C-terminal
           domain containing 2 protein.
          Length = 335

 Score = 56.4 bits (130), Expect = 8e-08
 Identities = 27/60 (45%), Positives = 38/60 (63%)
 Frame = +2

Query: 428 KVGTLKAINAYPIKSCAPVMLEKAECSILGLKDGWLXDRVVMVIDEKNXFVTARAFPELL 607
           +VGT+  +  YP+KSC  V + +AEC+ +GL+ G L DR  +VI E    VTAR  P L+
Sbjct: 53  QVGTVAKLWIYPVKSCKGVPVSEAECTAMGLRSGNLRDRFWLVIKEDGHMVTARQEPRLV 112


>U80457-1|AAB62397.1|  570|Homo sapiens transcription factor SIM2
           short form protein.
          Length = 570

 Score = 31.5 bits (68), Expect = 2.7
 Identities = 16/43 (37%), Positives = 24/43 (55%)
 Frame = +2

Query: 389 QENKKIKIPENWTKVGTLKAINAYPIKSCAPVMLEKAECSILG 517
           QE +K+  P+N TK+ T    N YP +  +   ++K EC  LG
Sbjct: 364 QETRKLVKPKN-TKMKTKLRTNPYPPQQYSSFQMDKLECGQLG 405


>U80456-1|AAB62396.1|  667|Homo sapiens transcription factor SIM2
           long form protein.
          Length = 667

 Score = 31.5 bits (68), Expect = 2.7
 Identities = 16/43 (37%), Positives = 24/43 (55%)
 Frame = +2

Query: 389 QENKKIKIPENWTKVGTLKAINAYPIKSCAPVMLEKAECSILG 517
           QE +K+  P+N TK+ T    N YP +  +   ++K EC  LG
Sbjct: 364 QETRKLVKPKN-TKMKTKLRTNPYPPQQYSSFQMDKLECGQLG 405


>BC110444-1|AAI10445.1|  570|Homo sapiens single-minded homolog 2
           (Drosophila) protein.
          Length = 570

 Score = 31.5 bits (68), Expect = 2.7
 Identities = 16/43 (37%), Positives = 24/43 (55%)
 Frame = +2

Query: 389 QENKKIKIPENWTKVGTLKAINAYPIKSCAPVMLEKAECSILG 517
           QE +K+  P+N TK+ T    N YP +  +   ++K EC  LG
Sbjct: 364 QETRKLVKPKN-TKMKTKLRTNPYPPQQYSSFQMDKLECGQLG 405


>AP000697-1|BAA89433.1|  667|Homo sapiens single-minded 2 protein
           protein.
          Length = 667

 Score = 31.5 bits (68), Expect = 2.7
 Identities = 16/43 (37%), Positives = 24/43 (55%)
 Frame = +2

Query: 389 QENKKIKIPENWTKVGTLKAINAYPIKSCAPVMLEKAECSILG 517
           QE +K+  P+N TK+ T    N YP +  +   ++K EC  LG
Sbjct: 364 QETRKLVKPKN-TKMKTKLRTNPYPPQQYSSFQMDKLECGQLG 405


>AJ001858-1|CAA05055.1|  463|Homo sapiens human SIM2 protein.
          Length = 463

 Score = 31.5 bits (68), Expect = 2.7
 Identities = 16/43 (37%), Positives = 24/43 (55%)
 Frame = +2

Query: 389 QENKKIKIPENWTKVGTLKAINAYPIKSCAPVMLEKAECSILG 517
           QE +K+  P+N TK+ T    N YP +  +   ++K EC  LG
Sbjct: 301 QETRKLVKPKN-TKMKTKLRTNPYPPQQYSSFQMDKLECGQLG 342


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,157,021
Number of Sequences: 237096
Number of extensions: 1231552
Number of successful extensions: 1888
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1862
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1888
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7253890590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -