Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10n17
         (652 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY089683-1|AAL90421.1|  340|Drosophila melanogaster RH59033p pro...    67   2e-11
AE013599-937|AAF58893.2|  340|Drosophila melanogaster CG1665-PA ...    66   5e-11
AE014296-2013|AAS65037.1|  518|Drosophila melanogaster CG7319-PC...    29   5.5  

>AY089683-1|AAL90421.1|  340|Drosophila melanogaster RH59033p
           protein.
          Length = 340

 Score = 67.3 bits (157), Expect = 2e-11
 Identities = 27/67 (40%), Positives = 46/67 (68%), Gaps = 4/67 (5%)
 Frame = +2

Query: 410 IPENWTKVGTLKAINAYPIKSCAPVMLEKA----ECSILGLKDGWLXDRVVMVIDEKNXF 577
           +P+ W +VGT++ I+ +P+KSCAP+ + K     +C +L +    + DR +MV++EKN  
Sbjct: 43  VPQKWRRVGTVERIHFFPVKSCAPMDISKPGVEYDCDVLSMSFEGIRDRTLMVVNEKNEM 102

Query: 578 VTARAFP 598
           +TARA+P
Sbjct: 103 ITARAYP 109


>AE013599-937|AAF58893.2|  340|Drosophila melanogaster CG1665-PA
           protein.
          Length = 340

 Score = 65.7 bits (153), Expect = 5e-11
 Identities = 26/67 (38%), Positives = 45/67 (67%), Gaps = 4/67 (5%)
 Frame = +2

Query: 410 IPENWTKVGTLKAINAYPIKSCAPVMLEKA----ECSILGLKDGWLXDRVVMVIDEKNXF 577
           +P+ W +VGT++ I+ +P+KSCAP+ + K     +C +L +    + DR +MV++EKN  
Sbjct: 43  VPQKWRRVGTVERIHFFPVKSCAPMDISKPGVEYDCDVLSMSFEGIRDRTLMVVNEKNEM 102

Query: 578 VTARAFP 598
           +TAR +P
Sbjct: 103 ITARVYP 109


>AE014296-2013|AAS65037.1|  518|Drosophila melanogaster CG7319-PC,
           isoform C protein.
          Length = 518

 Score = 29.1 bits (62), Expect = 5.5
 Identities = 18/55 (32%), Positives = 27/55 (49%)
 Frame = +1

Query: 328 CRRDGSWCAWRCLLRLSPVLSRKQEDKNTRKLD*SRNAQSYQRLSN*IMCASNVG 492
           CR+  + CAW+  LR       +  ++N   L  +R A+   RL+  IM AS  G
Sbjct: 57  CRQVVAHCAWKSALRCRTSRRTRATNENFIILKSARKARKKGRLAAFIMSASEQG 111


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,136,760
Number of Sequences: 53049
Number of extensions: 369302
Number of successful extensions: 578
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 565
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 573
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2765538900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)