Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10n17
         (652 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g30910.1 68414.m03781 molybdenum cofactor sulfurase family pr...    31   0.66 
At5g44720.2 68418.m05479 molybdenum cofactor sulfurase family pr...    29   3.5  
At5g44720.1 68418.m05480 molybdenum cofactor sulfurase family pr...    29   3.5  
At5g22780.1 68418.m02663 adaptin family protein similar to SP|P1...    29   3.5  
At5g22770.3 68418.m02661 adaptin family protein similar to SP|P1...    29   3.5  
At5g22770.2 68418.m02660 adaptin family protein similar to SP|P1...    29   3.5  
At5g22770.1 68418.m02659 adaptin family protein similar to SP|P1...    29   3.5  
At1g16540.1 68414.m01981 molybdenum cofactor sulfurase (LOS5) (A...    29   3.5  

>At1g30910.1 68414.m03781 molybdenum cofactor sulfurase family
           protein weak similarity to molybdenum cofactor sulfurase
           (LOS5/ABA3) [Arabidopsis thaliana] GI:15407262; contains
           Pfam profiles PF03476: MOSC N-terminal beta barrel
           domain, PF03473: MOSC domain
          Length = 318

 Score = 31.1 bits (67), Expect = 0.66
 Identities = 17/55 (30%), Positives = 30/55 (54%)
 Frame = +2

Query: 440 LKAINAYPIKSCAPVMLEKAECSILGLKDGWLXDRVVMVIDEKNXFVTARAFPEL 604
           + ++  YPIKSC  + L +A  +  G +  W  DR  ++++ K   +T R  P+L
Sbjct: 21  VSSLFVYPIKSCRGISLSQAALTPTGFR--W--DRNWLIVNSKGRGLTQRVEPKL 71


>At5g44720.2 68418.m05479 molybdenum cofactor sulfurase family
           protein weak similarity to molybdenum cofactor sulfurase
           (LOS5/ABA3) [Arabidopsis thaliana] GI:15407262; contains
           Pfam profiles PF03476: MOSC N-terminal beta barrel
           domain, PF03473: MOSC domain
          Length = 230

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 17/55 (30%), Positives = 29/55 (52%)
 Frame = +2

Query: 440 LKAINAYPIKSCAPVMLEKAECSILGLKDGWLXDRVVMVIDEKNXFVTARAFPEL 604
           ++++  YPIKSC  + + +A  +  G +  W  DR  +V++ K    T R  P L
Sbjct: 7   IQSLVIYPIKSCRGISVPQATVTHTGFQ--W--DRYWLVVNYKGRAYTQRVEPTL 57


>At5g44720.1 68418.m05480 molybdenum cofactor sulfurase family
           protein weak similarity to molybdenum cofactor sulfurase
           (LOS5/ABA3) [Arabidopsis thaliana] GI:15407262; contains
           Pfam profiles PF03476: MOSC N-terminal beta barrel
           domain, PF03473: MOSC domain
          Length = 308

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 17/55 (30%), Positives = 29/55 (52%)
 Frame = +2

Query: 440 LKAINAYPIKSCAPVMLEKAECSILGLKDGWLXDRVVMVIDEKNXFVTARAFPEL 604
           ++++  YPIKSC  + + +A  +  G +  W  DR  +V++ K    T R  P L
Sbjct: 7   IQSLVIYPIKSCRGISVPQATVTHTGFQ--W--DRYWLVVNYKGRAYTQRVEPTL 57


>At5g22780.1 68418.m02663 adaptin family protein similar to
           SP|P18484 adaptor-related protein complex 2 alpha 2
           subunit (Alpha-adaptin C) (Clathrin assembly protein
           complex 2 alpha-C large chain) {Rattus norvegicus};
           contains Pfam profiles PF01602 Adaptin N terminal
           region, PF02883 Adaptin C-terminal domain
          Length = 1013

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 9/68 (13%)
 Frame = +2

Query: 470 SCAPVMLEKAECSILGL---------KDGWLXDRVVMVIDEKNXFVTARAFPELLDCAAD 622
           SC P++ +KA   +L L          DGW  DR+  ++DE++  V   +   L+   ++
Sbjct: 153 SCRPLVRKKAALCLLRLFRKNPDAVNVDGWA-DRMAQLLDERDLGVLTSSTSLLVALVSN 211

Query: 623 N*ELHSYC 646
           N E +S C
Sbjct: 212 NHEAYSSC 219


>At5g22770.3 68418.m02661 adaptin family protein similar to
           SP|P18484 adaptor-related protein complex 2 alpha 2
           subunit (Alpha-adaptin C) (Clathrin assembly protein
           complex 2 alpha-C large chain) {Rattus norvegicus};
           contains Pfam profiles PF01602 Adaptin N terminal
           region, PF02883 Adaptin C-terminal domain
          Length = 1012

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 9/68 (13%)
 Frame = +2

Query: 470 SCAPVMLEKAECSILGL---------KDGWLXDRVVMVIDEKNXFVTARAFPELLDCAAD 622
           SC P++ +KA   +L L          DGW  DR+  ++DE++  V   +   L+   ++
Sbjct: 153 SCRPLVRKKAALCLLRLFRKNPDAVNVDGWA-DRMAQLLDERDLGVLTSSTSLLVALVSN 211

Query: 623 N*ELHSYC 646
           N E +S C
Sbjct: 212 NHEAYSSC 219


>At5g22770.2 68418.m02660 adaptin family protein similar to
           SP|P18484 adaptor-related protein complex 2 alpha 2
           subunit (Alpha-adaptin C) (Clathrin assembly protein
           complex 2 alpha-C large chain) {Rattus norvegicus};
           contains Pfam profiles PF01602 Adaptin N terminal
           region, PF02883 Adaptin C-terminal domain
          Length = 1012

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 9/68 (13%)
 Frame = +2

Query: 470 SCAPVMLEKAECSILGL---------KDGWLXDRVVMVIDEKNXFVTARAFPELLDCAAD 622
           SC P++ +KA   +L L          DGW  DR+  ++DE++  V   +   L+   ++
Sbjct: 153 SCRPLVRKKAALCLLRLFRKNPDAVNVDGWA-DRMAQLLDERDLGVLTSSTSLLVALVSN 211

Query: 623 N*ELHSYC 646
           N E +S C
Sbjct: 212 NHEAYSSC 219


>At5g22770.1 68418.m02659 adaptin family protein similar to
           SP|P18484 adaptor-related protein complex 2 alpha 2
           subunit (Alpha-adaptin C) (Clathrin assembly protein
           complex 2 alpha-C large chain) {Rattus norvegicus};
           contains Pfam profiles PF01602 Adaptin N terminal
           region, PF02883 Adaptin C-terminal domain
          Length = 1012

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 9/68 (13%)
 Frame = +2

Query: 470 SCAPVMLEKAECSILGL---------KDGWLXDRVVMVIDEKNXFVTARAFPELLDCAAD 622
           SC P++ +KA   +L L          DGW  DR+  ++DE++  V   +   L+   ++
Sbjct: 153 SCRPLVRKKAALCLLRLFRKNPDAVNVDGWA-DRMAQLLDERDLGVLTSSTSLLVALVSN 211

Query: 623 N*ELHSYC 646
           N E +S C
Sbjct: 212 NHEAYSSC 219


>At1g16540.1 68414.m01981 molybdenum cofactor sulfurase (LOS5)
           (ABA3) identical to molybdenum cofactor sulfurase
           (LOS5/ABA3) [Arabidopsis thaliana] GI:15407262;
           supporting cDNA gi|15407261|gb|AY034895.1|
          Length = 819

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 20/55 (36%), Positives = 26/55 (47%)
 Frame = +2

Query: 440 LKAINAYPIKSCAPVMLEKAECSILGLKDGWLXDRVVMVIDEKNXFVTARAFPEL 604
           LK+I  YPIKSCA   + +      GL    L DR  MV       +T +  PE+
Sbjct: 531 LKSITVYPIKSCAGFSVIRWPLCRTGL----LHDREWMVQGLTGEILTQKKVPEM 581


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,893,701
Number of Sequences: 28952
Number of extensions: 181585
Number of successful extensions: 309
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 307
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 309
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1354097952
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)