Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10n16
         (565 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q486R3 Cluster: Sensor protein; n=1; Colwellia psychrer...    34   2.0  
UniRef50_Q6NS55 Cluster: Pitpnm2 protein; n=7; Eutheria|Rep: Pit...    33   6.1  

>UniRef50_Q486R3 Cluster: Sensor protein; n=1; Colwellia
           psychrerythraea 34H|Rep: Sensor protein - Colwellia
           psychrerythraea (strain 34H / ATCC BAA-681)
           (Vibriopsychroerythus)
          Length = 434

 Score = 34.3 bits (75), Expect = 2.0
 Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
 Frame = -3

Query: 212 SQEVFGCRIPQ-YLKKTKTYLRYPLDREYLQHQNFDFPCYLL 90
           +Q + G R P  + ++    LR P   +YL H+NF++PC L+
Sbjct: 127 AQRLLGVRWPDDFGQRIDNLLRAPEFSDYLAHENFEYPCLLV 168


>UniRef50_Q6NS55 Cluster: Pitpnm2 protein; n=7; Eutheria|Rep:
           Pitpnm2 protein - Mus musculus (Mouse)
          Length = 1098

 Score = 32.7 bits (71), Expect = 6.1
 Identities = 15/43 (34%), Positives = 25/43 (58%)
 Frame = +2

Query: 329 PSISSESAAEVNSLVAXVEEGAKEEFXDAHESYHVIPDNQIEN 457
           PS  S S   + S+    +EG++EEF DAHE+ +   + Q ++
Sbjct: 317 PSRHSISEWRMQSIARDSDEGSEEEFFDAHENLYCTEEKQAKD 359


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 400,200,260
Number of Sequences: 1657284
Number of extensions: 5637651
Number of successful extensions: 12973
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 12774
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12972
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 37904934977
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)