Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10n16
         (565 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    25   1.7  
AF444782-1|AAL37903.1|  576|Anopheles gambiae Toll9 protein.           24   3.9  
AF378002-1|AAL16724.1|  336|Anopheles gambiae putative transposa...    23   5.2  

>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
           channel alpha1 subunit protein.
          Length = 1893

 Score = 25.0 bits (52), Expect = 1.7
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = -2

Query: 105 SMLFITSFNYEMLCKTFVXLLNGFDFHIFNIF 10
           +M F+  F  EML K +     G+   +FN F
Sbjct: 521 NMFFVALFTMEMLLKMYSLGFQGYFVSLFNRF 552


>AF444782-1|AAL37903.1|  576|Anopheles gambiae Toll9 protein.
          Length = 576

 Score = 23.8 bits (49), Expect = 3.9
 Identities = 8/12 (66%), Positives = 11/12 (91%)
 Frame = -3

Query: 179 YLKKTKTYLRYP 144
           YL KTKTY+++P
Sbjct: 542 YLLKTKTYIKWP 553


>AF378002-1|AAL16724.1|  336|Anopheles gambiae putative transposase
           protein.
          Length = 336

 Score = 23.4 bits (48), Expect = 5.2
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = +3

Query: 357 KSILSLXQLRKALKRNSSMHTRAIMLFQTIKSK 455
           KS  +  Q  + +K+NS + TRA  L+  + +K
Sbjct: 105 KSYRASKQSNRTIKQNSLIKTRARKLYDQVLTK 137


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 428,215
Number of Sequences: 2352
Number of extensions: 5367
Number of successful extensions: 8
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 52983882
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)