Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10n15
         (702 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8IEH2 Cluster: Putative uncharacterized protein PF13_0...    33   9.0  

>UniRef50_Q8IEH2 Cluster: Putative uncharacterized protein PF13_0080;
            n=4; Plasmodium|Rep: Putative uncharacterized protein
            PF13_0080 - Plasmodium falciparum (isolate 3D7)
          Length = 2518

 Score = 32.7 bits (71), Expect = 9.0
 Identities = 20/88 (22%), Positives = 40/88 (45%)
 Frame = +2

Query: 344  HSKQKIIIRA*DKVMKGRTLT*VTNKDNREDEVDEVRAGARGRYGVNEVREGDINNTNGV 523
            H  + III+    ++K +  T +    N+ ++ +  +   +  Y  N +   + NN N  
Sbjct: 1285 HRIKNIIIKQNSGIVKNKDKTFLHLIKNKSNKNNNNKKKNKNNYNNNNINNNNNNNNNN- 1343

Query: 524  **SLRR*NRKKWRVSGVREGDIRENNTN 607
              ++   N  K ++S  +  +IR NN N
Sbjct: 1344 --NINNNNNNKCKLSNSKRYNIRNNNNN 1369


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 549,204,548
Number of Sequences: 1657284
Number of extensions: 9965018
Number of successful extensions: 22070
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 21397
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22065
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 55785129165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)