Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte10n15
(702 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132862-11|CAB60541.1| 396|Caenorhabditis elegans Hypothetical... 29 2.4
Z70207-3|CAA94132.1| 336|Caenorhabditis elegans Hypothetical pr... 28 7.4
AL132862-12|CAB60542.1| 380|Caenorhabditis elegans Hypothetical... 28 7.4
Z73103-14|CAL22701.1| 387|Caenorhabditis elegans Hypothetical p... 27 9.8
Z73103-13|CAA97430.1| 340|Caenorhabditis elegans Hypothetical p... 27 9.8
Z68341-7|CAL22703.1| 387|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z68341-6|CAA92769.1| 340|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z46934-12|CAA87044.3| 539|Caenorhabditis elegans Hypothetical p... 27 9.8
X76113-1|CAA53719.1| 340|Caenorhabditis elegans phosphate carri... 27 9.8
AC024819-4|AAU20828.1| 469|Caenorhabditis elegans Hypothetical ... 27 9.8
AC024819-3|AAF59587.2| 923|Caenorhabditis elegans Hypothetical ... 27 9.8
>AL132862-11|CAB60541.1| 396|Caenorhabditis elegans Hypothetical
protein Y73F8A.16 protein.
Length = 396
Score = 29.5 bits (63), Expect = 2.4
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = +1
Query: 262 YNITMETKLFVKIFLSNQYVMNLMKIKPFKTENYYKSMR*GNERENTNISNE 417
+++ ME F + + NQ + K K K Y + GN+R+NT+ S E
Sbjct: 154 HSMRMEVAQFFPVTVYNQESIGNWKSKFHKNSTYGNRLDGGNKRKNTDSSEE 205
>Z70207-3|CAA94132.1| 336|Caenorhabditis elegans Hypothetical
protein F15A2.3 protein.
Length = 336
Score = 27.9 bits (59), Expect = 7.4
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = -1
Query: 681 HLFLYISPFNNIFSNFTAFLLHYTPLVLFSLISPSR 574
H LY NIF +FTAF+ PL+ F + P R
Sbjct: 264 HSNLYFEYLLNIFGSFTAFI---NPLLTFYFVLPYR 296
>AL132862-12|CAB60542.1| 380|Caenorhabditis elegans Hypothetical
protein Y73F8A.17 protein.
Length = 380
Score = 27.9 bits (59), Expect = 7.4
Identities = 15/52 (28%), Positives = 25/52 (48%)
Frame = +1
Query: 262 YNITMETKLFVKIFLSNQYVMNLMKIKPFKTENYYKSMR*GNERENTNISNE 417
+++ ME F + + NQ + K K K + + GN+R+NTN E
Sbjct: 154 HSMRMEVAQFFPVTVYNQESIGNWKSKFHKNATFENRLDGGNKRKNTNSREE 205
>Z73103-14|CAL22701.1| 387|Caenorhabditis elegans Hypothetical
protein F01G4.6b protein.
Length = 387
Score = 27.5 bits (58), Expect = 9.8
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = -3
Query: 202 WAHNLLDGYILKGLGSVGDEGLFKNTTASL 113
WA LL GY +GLG G +FKN A +
Sbjct: 148 WAPTLL-GYSAQGLGKFGFYEIFKNVYADM 176
>Z73103-13|CAA97430.1| 340|Caenorhabditis elegans Hypothetical
protein F01G4.6a protein.
Length = 340
Score = 27.5 bits (58), Expect = 9.8
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = -3
Query: 202 WAHNLLDGYILKGLGSVGDEGLFKNTTASL 113
WA LL GY +GLG G +FKN A +
Sbjct: 101 WAPTLL-GYSAQGLGKFGFYEIFKNVYADM 129
>Z68341-7|CAL22703.1| 387|Caenorhabditis elegans Hypothetical
protein F01G4.6b protein.
Length = 387
Score = 27.5 bits (58), Expect = 9.8
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = -3
Query: 202 WAHNLLDGYILKGLGSVGDEGLFKNTTASL 113
WA LL GY +GLG G +FKN A +
Sbjct: 148 WAPTLL-GYSAQGLGKFGFYEIFKNVYADM 176
>Z68341-6|CAA92769.1| 340|Caenorhabditis elegans Hypothetical
protein F01G4.6a protein.
Length = 340
Score = 27.5 bits (58), Expect = 9.8
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = -3
Query: 202 WAHNLLDGYILKGLGSVGDEGLFKNTTASL 113
WA LL GY +GLG G +FKN A +
Sbjct: 101 WAPTLL-GYSAQGLGKFGFYEIFKNVYADM 129
>Z46934-12|CAA87044.3| 539|Caenorhabditis elegans Hypothetical
protein ZK1320.6 protein.
Length = 539
Score = 27.5 bits (58), Expect = 9.8
Identities = 9/27 (33%), Positives = 21/27 (77%)
Frame = +3
Query: 540 GEIGRNGELVEFEKVILEKIILMECNE 620
G + ++GE+V+F++ E+++ +EC+E
Sbjct: 84 GLLEKSGEVVKFDRYSKERLLNLECDE 110
>X76113-1|CAA53719.1| 340|Caenorhabditis elegans phosphate carrier
protein protein.
Length = 340
Score = 27.5 bits (58), Expect = 9.8
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = -3
Query: 202 WAHNLLDGYILKGLGSVGDEGLFKNTTASL 113
WA LL GY +GLG G +FKN A +
Sbjct: 101 WAPTLL-GYSAQGLGKFGFYEIFKNVYADM 129
>AC024819-4|AAU20828.1| 469|Caenorhabditis elegans Hypothetical
protein Y55B1AL.3b protein.
Length = 469
Score = 27.5 bits (58), Expect = 9.8
Identities = 12/29 (41%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = -1
Query: 687 HFHLFLYISPFNNIFS-NFTAFLLHYTPL 604
HFHL I+P+ + + N+ FLL Y L
Sbjct: 246 HFHLLFIITPYEQVCNINWDLFLLMYNAL 274
>AC024819-3|AAF59587.2| 923|Caenorhabditis elegans Hypothetical
protein Y55B1AL.3a protein.
Length = 923
Score = 27.5 bits (58), Expect = 9.8
Identities = 12/29 (41%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = -1
Query: 687 HFHLFLYISPFNNIFS-NFTAFLLHYTPL 604
HFHL I+P+ + + N+ FLL Y L
Sbjct: 700 HFHLLFIITPYEQVCNINWDLFLLMYNAL 728
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,023,680
Number of Sequences: 27780
Number of extensions: 249781
Number of successful extensions: 648
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 632
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 648
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1624019012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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