Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10n13
         (317 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U51998-7|AAA96080.2|  769|Caenorhabditis elegans Hypothetical pr...    27   3.9  
U51998-6|ABS83845.1|  825|Caenorhabditis elegans Hypothetical pr...    27   3.9  
U51998-5|AAL00856.2|  648|Caenorhabditis elegans Hypothetical pr...    27   3.9  
U23511-5|AAC46794.1|  578|Caenorhabditis elegans Hypothetical pr...    27   3.9  
AF016665-2|AAC71181.1|  662|Caenorhabditis elegans Hypothetical ...    27   3.9  
U80029-15|AAB37594.2|  642|Caenorhabditis elegans Hypothetical p...    26   5.1  
U64848-1|AAB04881.2|  481|Caenorhabditis elegans Hypothetical pr...    26   5.1  
Z81549-3|CAB04468.1|  288|Caenorhabditis elegans Hypothetical pr...    26   6.8  
Z70035-10|CAA93871.2|  473|Caenorhabditis elegans Hypothetical p...    25   8.9  

>U51998-7|AAA96080.2|  769|Caenorhabditis elegans Hypothetical
           protein C12D12.1a protein.
          Length = 769

 Score = 26.6 bits (56), Expect = 3.9
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = -1

Query: 116 NPISSKTAPSSPANQQIPNIA 54
           NP SS TAP++P N   P  A
Sbjct: 655 NPTSSTTAPTAPVNPTSPTTA 675


>U51998-6|ABS83845.1|  825|Caenorhabditis elegans Hypothetical
           protein C12D12.1c protein.
          Length = 825

 Score = 26.6 bits (56), Expect = 3.9
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = -1

Query: 116 NPISSKTAPSSPANQQIPNIA 54
           NP SS TAP++P N   P  A
Sbjct: 711 NPTSSTTAPTAPVNPTSPTTA 731


>U51998-5|AAL00856.2|  648|Caenorhabditis elegans Hypothetical
           protein C12D12.1b protein.
          Length = 648

 Score = 26.6 bits (56), Expect = 3.9
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = -1

Query: 116 NPISSKTAPSSPANQQIPNIA 54
           NP SS TAP++P N   P  A
Sbjct: 534 NPTSSTTAPTAPVNPTSPTTA 554


>U23511-5|AAC46794.1|  578|Caenorhabditis elegans Hypothetical
           protein C32D5.6 protein.
          Length = 578

 Score = 26.6 bits (56), Expect = 3.9
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = -1

Query: 269 YRIENKYRFRTHKIQQTKSCR 207
           Y +ENK  FR H    T  CR
Sbjct: 554 YSLENKLHFRIHSAMGTMGCR 574


>AF016665-2|AAC71181.1|  662|Caenorhabditis elegans Hypothetical
           protein C49D10.8 protein.
          Length = 662

 Score = 26.6 bits (56), Expect = 3.9
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = -1

Query: 317 FFFSVPFLYIFVKFIIYRIENKY 249
           F+F VPF+YIF   I  +  N Y
Sbjct: 150 FYFLVPFIYIFGTKIAKKFHNVY 172


>U80029-15|AAB37594.2|  642|Caenorhabditis elegans Hypothetical
           protein T20D4.3 protein.
          Length = 642

 Score = 26.2 bits (55), Expect = 5.1
 Identities = 13/44 (29%), Positives = 22/44 (50%)
 Frame = -2

Query: 181 LVLFNKPFKVF*NVTT*ENKTRIPLVAKLRLQVPQISKFLILQH 50
           L+L +   ++  N+      TRIP+   L +  PQ+  F I+ H
Sbjct: 553 LILNSGTTQIGENLNLISKSTRIPIEQNLTIDNPQLQVFFIMLH 596


>U64848-1|AAB04881.2|  481|Caenorhabditis elegans Hypothetical
           protein C50E3.5 protein.
          Length = 481

 Score = 26.2 bits (55), Expect = 5.1
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = -2

Query: 277 LSSIESKTNIGFVHIKFSRPNLV 209
           L+S ES +N   +H KF RP+L+
Sbjct: 218 LTSAESSSNSEHLHAKFRRPHLL 240


>Z81549-3|CAB04468.1|  288|Caenorhabditis elegans Hypothetical
           protein F55C9.4 protein.
          Length = 288

 Score = 25.8 bits (54), Expect = 6.8
 Identities = 14/70 (20%), Positives = 31/70 (44%)
 Frame = +3

Query: 93  RSFATNGILVLFSHVVTF*NTLNGLLNSTRSLDDYDYVSTRFGLLNFMCTKPIFVFDSID 272
           + ++ NG+++  +  +   N  + +L S+R         T   LL   CT  +       
Sbjct: 145 QKYSDNGLIIYTTANLPNGNMYHQILGSSRRNVQVQTRCTLSDLLAMRCTNVLLCTPIYP 204

Query: 273 DKFHKYIKEW 302
           ++F+ ++K W
Sbjct: 205 EEFNLFLKHW 214


>Z70035-10|CAA93871.2|  473|Caenorhabditis elegans Hypothetical
           protein R09D1.12 protein.
          Length = 473

 Score = 25.4 bits (53), Expect = 8.9
 Identities = 19/46 (41%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
 Frame = +3

Query: 129 SHVVTF*NT-LNG--LLNSTRSLDDYDYVSTRFGLLNFMCTKPIFV 257
           SH+++F N   NG  L   TRS+DD D  ST F +   +    IFV
Sbjct: 29  SHMLSFMNPPKNGTSLPRLTRSIDDDDEGSTMFKVAGALFAYGIFV 74


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,080,273
Number of Sequences: 27780
Number of extensions: 126524
Number of successful extensions: 320
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 314
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 320
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 366105812
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)