Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10n13
         (317 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          22   2.1  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    21   3.6  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    21   4.7  
AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic ac...    20   6.3  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    20   6.3  
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    20   8.3  
DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholi...    20   8.3  

>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 21.8 bits (44), Expect = 2.1
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = -3

Query: 300 IPLYICEIYH 271
           IPLY+C + H
Sbjct: 80  IPLYVCRVLH 89


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 21.0 bits (42), Expect = 3.6
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = +3

Query: 210 TRFGLLNFMCTKPIFVFDSIDDKFHK 287
           T  G  N+     +FVFD ++D  ++
Sbjct: 106 TSLGSENYTGISDLFVFDDLNDYINR 131


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 20.6 bits (41), Expect = 4.7
 Identities = 6/12 (50%), Positives = 7/12 (58%)
 Frame = +2

Query: 110 WDSCFVFSCRYI 145
           W    VF CRY+
Sbjct: 132 WSKLQVFDCRYV 143


>AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha-3 protein.
          Length = 537

 Score = 20.2 bits (40), Expect = 6.3
 Identities = 7/21 (33%), Positives = 11/21 (52%)
 Frame = -1

Query: 119 KNPISSKTAPSSPANQQIPNI 57
           + P+  + +  SP N   PNI
Sbjct: 511 REPVDQQLSGISPRNYMYPNI 531


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 20.2 bits (40), Expect = 6.3
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -1

Query: 155 SILKCNDMRKQNKNPISSKT 96
           SI+  +  RKQ  +P+SS T
Sbjct: 88  SIITEDSSRKQTIDPLSSNT 107


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 19.8 bits (39), Expect = 8.3
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -3

Query: 90  FKSRKSANS*YCNIYNWNFRV 28
           F+ R +     CNIYN + R+
Sbjct: 364 FRGRDANRQNSCNIYNASSRM 384


>DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholine
           receptor alpha9subunit protein.
          Length = 431

 Score = 19.8 bits (39), Expect = 8.3
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +1

Query: 196 MIMFLQDLVC*ILCVRNLY 252
           MI    +L+C ILC+ +L+
Sbjct: 284 MIAASVNLICHILCMSDLH 302


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,039
Number of Sequences: 438
Number of extensions: 1477
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  6844365
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)