Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte10n11
(467 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_02_1171 + 24880363-24881355,24882553-24882702,24883505-248842... 33 0.087
07_01_0835 - 6780994-6781677,6784173-6785969,6787362-6787595 29 1.4
08_02_0613 - 19330124-19331587 29 1.9
03_06_0328 - 33172369-33173691 29 1.9
03_01_0469 - 3613062-3613745,3613952-3614512,3614600-3614690,361... 29 1.9
01_06_0893 - 32766994-32768841,32769596-32769782,32769860-327699... 29 1.9
10_02_0070 - 4919843-4919913,4921086-4921455 29 2.5
12_01_0752 - 6798938-6799312,6799628-6799768,6800257-6800325,680... 27 5.7
08_02_0757 + 20840885-20841281,20842937-20843025,20843132-208432... 27 5.7
08_01_0143 - 1125211-1126414,1129217-1129368 27 5.7
03_03_0242 + 15765726-15765965,15766703-15766874,15767056-157672... 27 5.7
01_06_1524 - 37980345-37980587,37980671-37980845,37980938-379810... 27 5.7
08_02_1277 + 25823835-25825113,25825201-25825418,25825501-258257... 27 7.5
11_01_0557 + 4394754-4396040 27 10.0
08_02_1202 - 25253175-25253340,25255573-25255681,25256021-252561... 27 10.0
05_07_0163 - 28094574-28094726,28095248-28095382,28095771-280959... 27 10.0
05_04_0285 - 19825106-19826988,19828479-19828529,19830013-19830361 27 10.0
05_03_0142 - 8866316-8866608,8867652-8867886,8868801-8869076,886... 27 10.0
04_01_0304 + 4136261-4136294,4136360-4136436,4136555-4136634,413... 27 10.0
>08_02_1171 +
24880363-24881355,24882553-24882702,24883505-24884210,
24885012-24885404,24885759-24885805,24886088-24886111
Length = 770
Score = 33.5 bits (73), Expect = 0.087
Identities = 17/43 (39%), Positives = 22/43 (51%)
Frame = -3
Query: 348 KNYFPAGLSRLCDCCALSRSWRGGLWRDLHPDDPRRSTVCPGG 220
+ YF G SRL D +R GG W H + RS++C GG
Sbjct: 201 EGYFGNGFSRLVDVLP-ARGGGGGGWFRCHHSETLRSSICEGG 242
>07_01_0835 - 6780994-6781677,6784173-6785969,6787362-6787595
Length = 904
Score = 29.5 bits (63), Expect = 1.4
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = -3
Query: 321 RLCDCCALSRSWRGGLWRDLHPDD 250
R C CC R W+ G WR DD
Sbjct: 784 RRCCCCLRRRLWKCGCWRTFLMDD 807
>08_02_0613 - 19330124-19331587
Length = 487
Score = 29.1 bits (62), Expect = 1.9
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +1
Query: 235 CRPTGIIWVQVPPQTAPPRPG 297
C P WV++PP T PP G
Sbjct: 197 CDPAANRWVELPPSTLPPEHG 217
>03_06_0328 - 33172369-33173691
Length = 440
Score = 29.1 bits (62), Expect = 1.9
Identities = 19/68 (27%), Positives = 29/68 (42%), Gaps = 6/68 (8%)
Frame = +1
Query: 130 PERCDPFSSHKSAGHTENRGSPYIASVLLVSSRADCRPTGIIWVQV------PPQTAPPR 291
P RCDP ++ + G Y ++L R+D T + V PP + PP
Sbjct: 147 PNRCDPSATFQPLPLRAGAGGDYTIALLGRDMRSDRETTRRFFQDVLCLCPPPPSSRPPP 206
Query: 292 PG*STAIT 315
P +A+T
Sbjct: 207 PSSFSAVT 214
>03_01_0469 -
3613062-3613745,3613952-3614512,3614600-3614690,
3614782-3614870,3614962-3615027,3615309-3615423,
3615521-3615966
Length = 683
Score = 29.1 bits (62), Expect = 1.9
Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Frame = +2
Query: 224 PGQTVDRRGSSGCK-SRHKPPRQDLDRAQQSH-KRDSPAGK*FFKFLTFVRVNIF 382
P V +R SSG + R +PPR LD+++ + + AG F L F +VN+F
Sbjct: 515 PATPVMKRSSSGNRLQRKRPPRLTLDKSRLAKGVAEQDAGS-FGDRLDFCKVNLF 568
>01_06_0893 - 32766994-32768841,32769596-32769782,32769860-32769987,
32770080-32770283,32770373-32770523,32771424-32771533,
32772534-32772903,32773031-32773189,32773719-32773848,
32773921-32773989,32774066-32774154,32774319-32774439,
32775878-32776148
Length = 1278
Score = 29.1 bits (62), Expect = 1.9
Identities = 28/81 (34%), Positives = 39/81 (48%), Gaps = 6/81 (7%)
Frame = +1
Query: 70 PFLNKIFK*PSTVQLPSMLFPE--RCDPFSSHKSA-GHTENRGS--PYIASVLLVSSR-A 231
P + K+ K T + P+ L + DP S S+ ++E R + P A+VL VS A
Sbjct: 863 PQVGKVAKTIPTPKQPAPLVDKVTSLDPVSKQMSSMSNSEAREAILPKKAAVLSVSQTPA 922
Query: 232 DCRPTGIIWVQVPPQTAPPRP 294
RP+ QVP T PP P
Sbjct: 923 ISRPSSAPLFQVPRSTLPPTP 943
>10_02_0070 - 4919843-4919913,4921086-4921455
Length = 146
Score = 28.7 bits (61), Expect = 2.5
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +2
Query: 218 FPPGQTVDRRGSSGCKSRHKPP 283
FPPGQT R S C SR + P
Sbjct: 70 FPPGQTRSRSASRTCCSRRRTP 91
>12_01_0752 -
6798938-6799312,6799628-6799768,6800257-6800325,
6800407-6800454,6801740-6801836,6801922-6802001,
6802099-6802170,6802335-6802429,6802853-6802934,
6805476-6805853
Length = 478
Score = 27.5 bits (58), Expect = 5.7
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +3
Query: 258 GASPATNRPAKTWIEHSNHINAIVQLE 338
G SPATNR AK + +N ++A V+ E
Sbjct: 250 GNSPATNRSAKLDMLFANKLHAFVEYE 276
>08_02_0757 +
20840885-20841281,20842937-20843025,20843132-20843257,
20843617-20844333,20844420-20844630,20844739-20845238,
20845998-20846023,20846393-20846531,20846579-20846660,
20846990-20847153
Length = 816
Score = 27.5 bits (58), Expect = 5.7
Identities = 15/36 (41%), Positives = 18/36 (50%), Gaps = 4/36 (11%)
Frame = -3
Query: 357 RNLKNYFPAGLSRLCDCCA----LSRSWRGGLWRDL 262
R L+ YFP G ++ D C SR W GG W L
Sbjct: 506 RRLQVYFP-GEKQIADFCEDDLRHSREWAGGKWNSL 540
>08_01_0143 - 1125211-1126414,1129217-1129368
Length = 451
Score = 27.5 bits (58), Expect = 5.7
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = -2
Query: 247 PSVYSL-PWRKPTALMQYTESLDSLCVLRSYVKKTGHSARETTWRVV 110
PSV ++ P+ +Q E + V + K TGHSA E W+++
Sbjct: 69 PSVVAIGPYHHGARHLQEAEKIKWSAVC-DFCKNTGHSADEVYWKIL 114
>03_03_0242 +
15765726-15765965,15766703-15766874,15767056-15767209,
15767287-15767350,15767533-15767640,15767817-15767942,
15768037-15768269,15768565-15768787
Length = 439
Score = 27.5 bits (58), Expect = 5.7
Identities = 25/80 (31%), Positives = 32/80 (40%), Gaps = 1/80 (1%)
Frame = -3
Query: 357 RNLKNYFPAG-LSRLCDCCALSRSWRGGLWRDLHPDDPRRSTVCPGGNQQH*CNIRRASI 181
+ LK +P G + +L DC + G +H PR S V P G
Sbjct: 365 QRLKINYPTGNMFKLHDCAVCQLVMKPGEGISVHGSIPRNSRVDPWG----------GPF 414
Query: 180 LCVSCALM*RKRVTALGKQH 121
LC SC L K+ GKQH
Sbjct: 415 LCSSCQL---KKEAMEGKQH 431
>01_06_1524 -
37980345-37980587,37980671-37980845,37980938-37981001,
37981080-37981194,37982262-37982406,37984671-37984981
Length = 350
Score = 27.5 bits (58), Expect = 5.7
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +1
Query: 232 DCRPTGIIWVQVP 270
DC+P G+IW Q P
Sbjct: 257 DCKPLGVIWAQFP 269
>08_02_1277 +
25823835-25825113,25825201-25825418,25825501-25825724,
25826468-25827080,25827735-25827775,25830549-25831191,
25832595-25834012,25834110-25834251,25834415-25834522,
25835346-25835558,25835643-25835753,25836099-25836293,
25836555-25836695,25836835-25836909
Length = 1806
Score = 27.1 bits (57), Expect = 7.5
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = -1
Query: 293 GLGGAVCGGTCTQMIPVGLQSALEETNSTDA 201
G+GGA GGT +P+ +E ++ DA
Sbjct: 666 GIGGAGAGGTAAAALPLAFAVCMEWGHAVDA 696
>11_01_0557 + 4394754-4396040
Length = 428
Score = 26.6 bits (56), Expect = 10.0
Identities = 11/36 (30%), Positives = 22/36 (61%)
Frame = -2
Query: 124 TWRVVERSKVT*ISYLRTVNYYSFFFVSLYVCLFRS 17
T R++E +K + + + ++ + FFV Y+C+F S
Sbjct: 379 TGRILEAAKASNMDLTSSESWRTVFFVPGYLCIFSS 414
>08_02_1202 -
25253175-25253340,25255573-25255681,25256021-25256123,
25256246-25256277,25257697-25258178,25258946-25259025,
25259107-25259165,25259341-25259413,25259526-25259660
Length = 412
Score = 26.6 bits (56), Expect = 10.0
Identities = 11/38 (28%), Positives = 21/38 (55%)
Frame = +1
Query: 121 MLFPERCDPFSSHKSAGHTENRGSPYIASVLLVSSRAD 234
++ P RC P++S A ++ PY+A L+ + A+
Sbjct: 155 IMAPGRCSPYASASCAAGGDSGREPYVAGHHLLVAHAE 192
>05_07_0163 -
28094574-28094726,28095248-28095382,28095771-28095923,
28096010-28096208,28096312-28096349,28096849-28097020,
28097666-28097788,28097869-28098284
Length = 462
Score = 26.6 bits (56), Expect = 10.0
Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +2
Query: 218 FPPGQTVDRRGSSGCKSRHKPPRQDLDRA-QQSHKRDS 328
F P Q+V++ G SG PP +A QS KRDS
Sbjct: 339 FAPDQSVEQLGLSGVLVLDAPPNGPAGKAGLQSTKRDS 376
>05_04_0285 - 19825106-19826988,19828479-19828529,19830013-19830361
Length = 760
Score = 26.6 bits (56), Expect = 10.0
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +2
Query: 224 PGQTVDRRGSSGCKSRHKPPRQDLDRAQQSHKR 322
PG VD+R K+ K RQ RAQ+ H+R
Sbjct: 256 PGCDVDKREKIRQKNEKKHQRQKERRAQELHER 288
>05_03_0142 -
8866316-8866608,8867652-8867886,8868801-8869076,
8869166-8869292,8869869-8870116,8870189-8871104,
8871980-8872086,8872562-8872930
Length = 856
Score = 26.6 bits (56), Expect = 10.0
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = -3
Query: 312 DCCALSRSWRGGLWRDLHPDDPRRSTVCP 226
+CC + G +W LH D+P ++CP
Sbjct: 424 ECCKRTEP-HGIIWSYLHRDNPEGCSLCP 451
>04_01_0304 +
4136261-4136294,4136360-4136436,4136555-4136634,
4137244-4137310,4137975-4138166,4138763-4139059
Length = 248
Score = 26.6 bits (56), Expect = 10.0
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = +2
Query: 179 RIEALRILHQCCWFPPGQTVDRRGSSGCKSRHKPPRQD 292
R+ ALR H+ C PP GS+ C+ PP QD
Sbjct: 142 RVPALRPCHKPCGAPPS-----HGSNTCEVWAAPPLQD 174
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,061,550
Number of Sequences: 37544
Number of extensions: 269665
Number of successful extensions: 814
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 795
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 813
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 943260316
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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