Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10n11
         (467 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    23   4.0  
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p...    23   7.0  
AB090822-1|BAC57919.1|  468|Anopheles gambiae gag-like protein p...    22   9.3  

>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative
           TPR-containing phosphoprotein protein.
          Length = 1200

 Score = 23.4 bits (48), Expect = 4.0
 Identities = 10/13 (76%), Positives = 10/13 (76%)
 Frame = +3

Query: 18  LLKRQTYKETKKN 56
           LLKRQ YKE  KN
Sbjct: 874 LLKRQEYKEKTKN 886


>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
            protein.
          Length = 1077

 Score = 22.6 bits (46), Expect = 7.0
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = +2

Query: 116  PPCCFPSAVTRFLHIRAQDTQRIEALRILHQ 208
            P C F SA+    H  A   +  +A +ILHQ
Sbjct: 983  PSCSFCSAIDTLEHKFAGCRRVADAWQILHQ 1013


>AB090822-1|BAC57919.1|  468|Anopheles gambiae gag-like protein
           protein.
          Length = 468

 Score = 22.2 bits (45), Expect = 9.3
 Identities = 15/42 (35%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
 Frame = -3

Query: 285 RGGLWRDLHPDDPRRSTVCPG-GNQQH*CNIRRASILCVSCA 163
           RG + RD H      S VC   G   H      A + C SCA
Sbjct: 412 RGHVSRDCH-SPVNHSNVCIRCGTSGHLAATCEAEVRCASCA 452


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 466,060
Number of Sequences: 2352
Number of extensions: 9975
Number of successful extensions: 12
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 40820256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)