Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10n11
         (467 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058551-1|AAL13780.1|  806|Drosophila melanogaster LD24714p pro...    27   9.6  
AE014134-539|AAF51161.1|  757|Drosophila melanogaster CG3542-PB,...    27   9.6  
AE014134-538|AAF51160.1|  806|Drosophila melanogaster CG3542-PA,...    27   9.6  
AE013599-3554|AAF46965.2| 1073|Drosophila melanogaster CG30188-P...    27   9.6  

>AY058551-1|AAL13780.1|  806|Drosophila melanogaster LD24714p
           protein.
          Length = 806

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 15/42 (35%), Positives = 19/42 (45%), Gaps = 6/42 (14%)
 Frame = -2

Query: 226 WRKPTALMQYTESLDSLCVLRSYVKKTGH------SARETTW 119
           W KP ALM   E L + C  + Y   TG       + +ET W
Sbjct: 78  WEKPEALMTPAELLHNQCPWKEYRSDTGKVYYHNVATKETCW 119


>AE014134-539|AAF51161.1|  757|Drosophila melanogaster CG3542-PB,
           isoform B protein.
          Length = 757

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 15/42 (35%), Positives = 19/42 (45%), Gaps = 6/42 (14%)
 Frame = -2

Query: 226 WRKPTALMQYTESLDSLCVLRSYVKKTGH------SARETTW 119
           W KP ALM   E L + C  + Y   TG       + +ET W
Sbjct: 29  WEKPEALMTPAELLHNQCPWKEYRSDTGKVYYHNVATKETCW 70


>AE014134-538|AAF51160.1|  806|Drosophila melanogaster CG3542-PA,
           isoform A protein.
          Length = 806

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 15/42 (35%), Positives = 19/42 (45%), Gaps = 6/42 (14%)
 Frame = -2

Query: 226 WRKPTALMQYTESLDSLCVLRSYVKKTGH------SARETTW 119
           W KP ALM   E L + C  + Y   TG       + +ET W
Sbjct: 78  WEKPEALMTPAELLHNQCPWKEYRSDTGKVYYHNVATKETCW 119


>AE013599-3554|AAF46965.2| 1073|Drosophila melanogaster CG30188-PA
            protein.
          Length = 1073

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 20/57 (35%), Positives = 23/57 (40%), Gaps = 1/57 (1%)
 Frame = -1

Query: 296  PGLGGAVCGGTCTQMIPVGLQ-SALEETNSTDAIYGEPRFSVCPALLCEENGSQRSG 129
            PG GG   G T T     G    A E   S  + YG       P L  + NGS +SG
Sbjct: 933  PGRGGGGGGATVTAAGAGGYHLPAYETRTSPTSPYGSTTTCTMPLLGGQSNGSLQSG 989


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,162,177
Number of Sequences: 53049
Number of extensions: 443563
Number of successful extensions: 1152
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1101
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1152
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1580609772
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)