Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte10n05
(731 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_41378| Best HMM Match : No HMM Matches (HMM E-Value=.) 226 2e-59
SB_26407| Best HMM Match : UQ_con (HMM E-Value=0) 171 7e-43
SB_15708| Best HMM Match : UQ_con (HMM E-Value=0) 96 3e-20
SB_44322| Best HMM Match : UQ_con (HMM E-Value=1.6e-37) 83 3e-16
SB_5638| Best HMM Match : No HMM Matches (HMM E-Value=.) 67 1e-11
SB_28696| Best HMM Match : UQ_con (HMM E-Value=5.3e-30) 63 2e-10
SB_33407| Best HMM Match : UQ_con (HMM E-Value=0) 62 3e-10
SB_28812| Best HMM Match : No HMM Matches (HMM E-Value=.) 59 4e-09
SB_7202| Best HMM Match : UQ_con (HMM E-Value=5.9e-05) 58 1e-08
SB_21041| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 2e-07
SB_33408| Best HMM Match : UQ_con (HMM E-Value=3.7e-07) 52 5e-07
SB_3717| Best HMM Match : UQ_con (HMM E-Value=0.00017) 48 1e-05
SB_26077| Best HMM Match : UQ_con (HMM E-Value=6e-18) 47 2e-05
SB_26076| Best HMM Match : UQ_con (HMM E-Value=3.6e-15) 44 1e-04
SB_24498| Best HMM Match : Galactosyl_T_2 (HMM E-Value=0) 44 2e-04
SB_26761| Best HMM Match : UQ_con (HMM E-Value=1.7e-06) 42 7e-04
SB_9528| Best HMM Match : 7tm_1 (HMM E-Value=2.6e-39) 38 0.008
SB_57663| Best HMM Match : UQ_con (HMM E-Value=0.24) 37 0.015
SB_36444| Best HMM Match : UQ_con (HMM E-Value=2.8) 37 0.015
SB_30411| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.034
SB_26178| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.059
SB_23713| Best HMM Match : Disintegrin (HMM E-Value=6.6e-05) 32 0.55
SB_1677| Best HMM Match : WD40 (HMM E-Value=0.00074) 31 0.96
SB_30136| Best HMM Match : HSP20 (HMM E-Value=0.44) 30 2.2
SB_31103| Best HMM Match : CC (HMM E-Value=8.3) 29 5.1
SB_39170| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.8
SB_36855| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.8
SB_35256| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.8
SB_36850| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.0
SB_42488| Best HMM Match : ig (HMM E-Value=4.2e-06) 28 9.0
SB_21169| Best HMM Match : zf-CHY (HMM E-Value=2.1e-09) 28 9.0
>SB_41378| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 473
Score = 226 bits (552), Expect = 2e-59
Identities = 93/127 (73%), Positives = 112/127 (88%)
Frame = +3
Query: 159 ELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLNFPKEYPLRPPRMKFV 338
EL K PVEGFSAGL DD D+YKWE++++GPP T YE G+FKA + FPKEYP RPP + F+
Sbjct: 343 ELQKKPVEGFSAGLFDDEDLYKWEIMVVGPPGTYYEEGYFKASMVFPKEYPQRPPTLTFI 402
Query: 339 TEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETILISVISMLADPNDES 518
++IWHPN+ KNG+VCISILHEPG+DK+GYEKA ERW P+HTVETI++SVISMLA+PNDES
Sbjct: 403 SDIWHPNVHKNGEVCISILHEPGEDKYGYEKADERWRPIHTVETIMLSVISMLAEPNDES 462
Query: 519 PANVDAA 539
PANVDAA
Sbjct: 463 PANVDAA 469
>SB_26407| Best HMM Match : UQ_con (HMM E-Value=0)
Length = 1282
Score = 171 bits (415), Expect = 7e-43
Identities = 77/145 (53%), Positives = 106/145 (73%), Gaps = 6/145 (4%)
Frame = +3
Query: 159 ELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLNFPKEYPLRPPRMKFV 338
+L + PVEGF+ + D+++ ++W+V I GPP TLY GG+FKAH++FP +YP PP +F+
Sbjct: 1135 KLTEEPVEGFTVEVPDESNTFEWDVAIFGPPGTLYAGGYFKAHMSFPHDYPYSPPTFRFL 1194
Query: 339 TEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETILISVISMLADPNDES 518
T++WHPNI ++GDVCISILH P DD E SERW P V TIL+SVIS+L +PN S
Sbjct: 1195 TKMWHPNIYESGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISLLNEPNTFS 1254
Query: 519 PANVDAA---KEWRE---RYSEFKK 575
PANVDA+ ++WRE + SE++K
Sbjct: 1255 PANVDASVMFRKWRETKGKDSEYEK 1279
>SB_15708| Best HMM Match : UQ_con (HMM E-Value=0)
Length = 145
Score = 95.9 bits (228), Expect = 3e-20
Identities = 48/150 (32%), Positives = 80/150 (53%)
Frame = +3
Query: 159 ELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLNFPKEYPLRPPRMKFV 338
EL K+ + F +D+++I W+ LI+ P Y G F+ + FP EYP +PP++ F
Sbjct: 4 ELRKSGTKTFRDVKVDESNILYWQGLIV-PEMPPYNKGAFRIEICFPAEYPFKPPKITFK 62
Query: 339 TEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETILISVISMLADPNDES 518
T+I+HPNID+ G VC+ I+ + E W P E ++ ++++++ DP E
Sbjct: 63 TKIYHPNIDEKGQVCLPII------------SPENWKPATKTEQVIQALLALVHDPEPEH 110
Query: 519 PANVDAAKEWRERYSEFKKKVARCVRKSQE 608
P D A+E+ + +F K C +K E
Sbjct: 111 PLRADLAEEYSKDKKKFMKNAEDCTKKYGE 140
>SB_44322| Best HMM Match : UQ_con (HMM E-Value=1.6e-37)
Length = 190
Score = 82.6 bits (195), Expect = 3e-16
Identities = 39/131 (29%), Positives = 66/131 (50%)
Frame = +3
Query: 237 IIGPPDTLYEGGFFKAHLNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDK 416
+IG T Y G FK + P+ YP PP+++FVT I+HPNID +G +C+ L P
Sbjct: 2 LIGAEGTPYHKGIFKLDIQIPERYPFEPPKVRFVTPIYHPNIDSSGRICLDTLKMP---- 57
Query: 417 WGYEKASERWLPVHTVETILISVISMLADPNDESPANVDAAKEWRERYSEFKKKVARCVR 596
W P + ++L +++ ++A+PN + P + + E++ ++F +K
Sbjct: 58 -----PKGMWKPALNISSVLSTILILMAEPNPDDPLMAEISNEFKYNKAQFLEKAKEWTL 112
Query: 597 KSQEDCF*EQK 629
K D E K
Sbjct: 113 KFAMDPSLENK 123
>SB_5638| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 151
Score = 67.3 bits (157), Expect = 1e-11
Identities = 33/69 (47%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
Frame = +3
Query: 204 DDNDIYKWEVLIIGPPDTLYEGGFFKAHLNFPKEYPLRPPRMKFVTE-----IWHPNIDK 368
D +DI K LI GP DT YEGGFF + P +YP+RPPR+K +T ++PN+ +
Sbjct: 6 DKDDIPKIHALITGPFDTPYEGGFFYFLIRCPPDYPIRPPRVKLMTTGSGQVRFNPNLYR 65
Query: 369 NGDVCISIL 395
NG VC+SI+
Sbjct: 66 NGKVCLSII 74
>SB_28696| Best HMM Match : UQ_con (HMM E-Value=5.3e-30)
Length = 204
Score = 63.3 bits (147), Expect = 2e-10
Identities = 30/107 (28%), Positives = 54/107 (50%)
Frame = +3
Query: 309 PLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETILISVI 488
P PP+++FVT I+HPNID +G +C+ L P W P + ++L +++
Sbjct: 40 PFEPPKVRFVTPIYHPNIDSSGRICLDTLKMP---------PKGMWKPALNISSVLSTIL 90
Query: 489 SMLADPNDESPANVDAAKEWRERYSEFKKKVARCVRKSQEDCF*EQK 629
++A+PN + P + + E++ ++F +K K D E K
Sbjct: 91 ILMAEPNPDDPLMAEISNEFKYNKAQFLEKAKEWTLKFAMDPSLENK 137
>SB_33407| Best HMM Match : UQ_con (HMM E-Value=0)
Length = 226
Score = 62.5 bits (145), Expect = 3e-10
Identities = 39/121 (32%), Positives = 58/121 (47%)
Frame = +3
Query: 159 ELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLNFPKEYPLRPPRMKFV 338
E+ +P SAG D D+Y+W I+GPP ++YEGG F ++FP +YP +PP+
Sbjct: 106 EITLDPPPNCSAGPKGD-DLYEWYSTILGPPGSVYEGGVFFLDIHFPSDYPFKPPK---- 160
Query: 339 TEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETILISVISMLADPNDES 518
G VC+ IL + W P T+ +L+S+ S+L D N
Sbjct: 161 -----------GMVCLDIL-------------KDSWSPALTISKVLLSICSLLTDCNPAD 196
Query: 519 P 521
P
Sbjct: 197 P 197
>SB_28812| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 385
Score = 58.8 bits (136), Expect = 4e-09
Identities = 32/111 (28%), Positives = 57/111 (51%), Gaps = 1/111 (0%)
Frame = +3
Query: 168 KNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLNFPKEYPLRPPRMKFVTEI 347
+N E + A ++DN +++W + GPPDT + GG + + P EYP++PP + +T
Sbjct: 23 RNATELYHAQPLEDN-LFEWHFTVRGPPDTEFAGGRYHGRIILPPEYPMKPPSIMLLTPN 81
Query: 348 WHPNIDKNGDVCISI-LHEPGDDKWGYEKASERWLPVHTVETILISVISML 497
I K +C+S+ H P E W P ++ T+L+++I +
Sbjct: 82 GRFEIGKK--ICLSMSAHHP-----------ETWQPSWSIRTVLMAIIGFM 119
>SB_7202| Best HMM Match : UQ_con (HMM E-Value=5.9e-05)
Length = 200
Score = 57.6 bits (133), Expect = 1e-08
Identities = 24/56 (42%), Positives = 36/56 (64%)
Frame = +3
Query: 159 ELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLNFPKEYPLRPPR 326
E+ +P SAG D D+Y+W I+GPP ++YEGG F ++FP +YP +PP+
Sbjct: 146 EITLDPPPNCSAGPKGD-DLYEWYSTILGPPGSVYEGGVFFLDIHFPSDYPFKPPK 200
>SB_21041| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 269
Score = 53.2 bits (122), Expect = 2e-07
Identities = 29/86 (33%), Positives = 48/86 (55%)
Frame = +3
Query: 321 PRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETILISVISMLA 500
PR F+T+I+HPN+ KNG++C++ L + W P ++ +L++V +L
Sbjct: 144 PRF-FLTKIFHPNVAKNGEICVNTLKKD-------------WKPDLGIKQVLLTVKCLLI 189
Query: 501 DPNDESPANVDAAKEWRERYSEFKKK 578
PN ES N +A K ERY ++ K+
Sbjct: 190 VPNPESALNEEAGKLLLERYDDYSKR 215
>SB_33408| Best HMM Match : UQ_con (HMM E-Value=3.7e-07)
Length = 181
Score = 52.0 bits (119), Expect = 5e-07
Identities = 21/47 (44%), Positives = 32/47 (68%)
Frame = +3
Query: 189 SAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLNFPKEYPLRPPRM 329
SAG D +Y+W I+GPP ++YEGG F ++FP +YP +PP++
Sbjct: 43 SAGPKGDK-LYEWYSTILGPPGSVYEGGVFFLDIHFPTDYPFKPPKV 88
>SB_3717| Best HMM Match : UQ_con (HMM E-Value=0.00017)
Length = 123
Score = 47.6 bits (108), Expect = 1e-05
Identities = 16/47 (34%), Positives = 30/47 (63%)
Frame = +3
Query: 210 NDIYKWEVLIIGPPDTLYEGGFFKAHLNFPKEYPLRPPRMKFVTEIW 350
+++++W + GPPDT + GG + + P EYP++PP + +T +W
Sbjct: 1 DNLFEWHFTVRGPPDTEFAGGRYHGRIILPPEYPMKPPSIMLLT-VW 46
>SB_26077| Best HMM Match : UQ_con (HMM E-Value=6e-18)
Length = 215
Score = 46.8 bits (106), Expect = 2e-05
Identities = 24/57 (42%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Frame = +3
Query: 234 LIIGPPDTLYEGGFFKAHLNFPKEYPLRPPRMKFVTEIWHPNID-KNGDVCISILHE 401
L I P D Y GG FK + ++YP PP + V I+HPN+D +G VC+S+L +
Sbjct: 41 LQITPTDGAYRGGQFKFSVK-TEDYPNTPPVPRCVNNIYHPNMDLDDGSVCLSLLDD 96
>SB_26076| Best HMM Match : UQ_con (HMM E-Value=3.6e-15)
Length = 243
Score = 44.4 bits (100), Expect = 1e-04
Identities = 33/109 (30%), Positives = 51/109 (46%)
Frame = +3
Query: 234 LIIGPPDTLYEGGFFKAHLNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDD 413
L I P D Y GG FK + +YP P + T+I+HPN+D VC+S+L DD
Sbjct: 41 LQITPTDGAYRGGQFKFSVR-TTDYPNVAPSINCKTKIYHPNMDGYDGVCMSLL----DD 95
Query: 414 KWGYEKASERWLPVHTVETILISVISMLADPNDESPANVDAAKEWRERY 560
W + +E ++ ++ + +PN E P + +E E Y
Sbjct: 96 ----------WQASNDLEDLVQGLLFLFYNPNLEDPLSSLFEEESEEEY 134
>SB_24498| Best HMM Match : Galactosyl_T_2 (HMM E-Value=0)
Length = 446
Score = 43.6 bits (98), Expect = 2e-04
Identities = 19/27 (70%), Positives = 23/27 (85%)
Frame = +3
Query: 420 GYEKASERWLPVHTVETILISVISMLA 500
GYE ++ERW PV +VE IL+SVISMLA
Sbjct: 2 GYESSAERWSPVQSVEKILLSVISMLA 28
>SB_26761| Best HMM Match : UQ_con (HMM E-Value=1.7e-06)
Length = 739
Score = 41.5 bits (93), Expect = 7e-04
Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Frame = +3
Query: 207 DNDIYKWEVLIIGPPDTLYEGGFFKAHLNFPKEYPLRPPRMKFVTEI---WHPNIDKNGD 377
D+DI++ V+I GP T Y+ G F + P YP PP +++ +PN+ ++G
Sbjct: 632 DHDIFR--VMIEGPAGTPYDHGLFAFDILLPANYPDAPPSFHYLSMCNGRLNPNLYEDGK 689
Query: 378 VCIS 389
VCI+
Sbjct: 690 VCIT 693
>SB_9528| Best HMM Match : 7tm_1 (HMM E-Value=2.6e-39)
Length = 841
Score = 37.9 bits (84), Expect = 0.008
Identities = 17/48 (35%), Positives = 26/48 (54%)
Frame = +3
Query: 183 GFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLNFPKEYPLRPPR 326
G L+D+ K + I GPP+T +EGG + + P+ YP PP+
Sbjct: 676 GIKVELVDET-FTKLKGEIRGPPETPFEGGTYNLDIVIPETYPFNPPK 722
>SB_57663| Best HMM Match : UQ_con (HMM E-Value=0.24)
Length = 48
Score = 37.1 bits (82), Expect = 0.015
Identities = 12/37 (32%), Positives = 24/37 (64%)
Frame = +3
Query: 441 RWLPVHTVETILISVISMLADPNDESPANVDAAKEWR 551
+W P + T+L+S+ ++L+ PN + P D A++W+
Sbjct: 2 KWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEQWK 38
>SB_36444| Best HMM Match : UQ_con (HMM E-Value=2.8)
Length = 55
Score = 37.1 bits (82), Expect = 0.015
Identities = 18/46 (39%), Positives = 24/46 (52%)
Frame = +3
Query: 204 DDNDIYKWEVLIIGPPDTLYEGGFFKAHLNFPKEYPLRPPRMKFVT 341
D+N + L+ GP DT Y G F + FP YP PP +K +T
Sbjct: 1 DENRMDFARALVTGPVDTPYSRGCFVFDIFFPGTYPNVPPLVKLIT 46
>SB_30411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 710
Score = 35.9 bits (79), Expect = 0.034
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +3
Query: 231 VLIIGPPDTLYEGGFFKAHLNFPKEYPLRPPRM-KFVTEI 347
V GP T YEGG +K ++ P++YP + P + F EI
Sbjct: 52 VKFFGPVGTPYEGGVWKVRVDLPEKYPFKSPSIANFTIEI 91
>SB_26178| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 897
Score = 35.1 bits (77), Expect = 0.059
Identities = 35/141 (24%), Positives = 59/141 (41%), Gaps = 9/141 (6%)
Frame = +3
Query: 186 FSAGLIDDNDIYKWEVLI--IGPPDTLY----EGG--FFKAHLNFPKEYPLRPPRMKFVT 341
FSA L+DDN +++W V + I LY E G F ++ FP+ +P PP M+ +
Sbjct: 754 FSAELVDDN-LFEWNVKLHTIDGDSLLYRDMVETGSKFILLNITFPENFPFAPPFMRVLA 812
Query: 342 -EIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETILISVISMLADPNDES 518
I + G +C+ +L G W +TVE +++ + +
Sbjct: 813 PRIEGGFVLDGGAICMELLTPKG------------WSSAYTVEAVVLQFSAAVVKGKGRI 860
Query: 519 PANVDAAKEWRERYSEFKKKV 581
A +E S +K+ V
Sbjct: 861 DRTCKKAFSKKEAESAYKRLV 881
>SB_23713| Best HMM Match : Disintegrin (HMM E-Value=6.6e-05)
Length = 1154
Score = 31.9 bits (69), Expect = 0.55
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = +3
Query: 519 PANVDAAKEWRERYSEFKKKVARCVRKSQED-CF*EQKDI*KRIYILLKKGHCDTGKHFT 695
PA+V ++ +++S K+ V KS+ + CF E +DI Y L + CD G
Sbjct: 347 PASVSGQRDNNKKFSPCSKRQVSYVLKSKSELCFKEPRDIICGNYKLEEGEECDPGNLGV 406
Query: 696 TNTE 707
T T+
Sbjct: 407 TGTK 410
>SB_1677| Best HMM Match : WD40 (HMM E-Value=0.00074)
Length = 1087
Score = 31.1 bits (67), Expect = 0.96
Identities = 15/28 (53%), Positives = 20/28 (71%), Gaps = 2/28 (7%)
Frame = +3
Query: 504 PNDESPANV--DAAKEWRERYSEFKKKV 581
PN+E+ ANV D AK W E+ +E +KKV
Sbjct: 127 PNEEAHANVIVDPAKSWDEQNNEVQKKV 154
>SB_30136| Best HMM Match : HSP20 (HMM E-Value=0.44)
Length = 233
Score = 29.9 bits (64), Expect = 2.2
Identities = 22/78 (28%), Positives = 33/78 (42%)
Frame = -2
Query: 334 NFIRGGLKGYSLGKFKCALKKPPSYSVSGGPIMRTSHLYISLSSIKPAEKPSTGFLFSSE 155
+++R +KG + KP S S T HL I++ +K +P S+
Sbjct: 97 HYVRAVIKGKAFQLVLSEEVKPDSSSAKRS--QTTGHLLITMPKMKETIQPVKRVQKISQ 154
Query: 154 IKKDLKDTHFTNDNAQIG 101
K + KDT TN Q G
Sbjct: 155 PKLEQKDTKTTNPTVQQG 172
>SB_31103| Best HMM Match : CC (HMM E-Value=8.3)
Length = 93
Score = 28.7 bits (61), Expect = 5.1
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = -3
Query: 396 EVLICRHHHFYQYLDAIFQSQISSGVVSKDIPWEN 292
+VLI H H Y+ L ++ Q+ +G SK+ P+ N
Sbjct: 3 DVLIWAHEHSYEKLFRVYNQQMCNG--SKEAPYTN 35
>SB_39170| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 79
Score = 28.3 bits (60), Expect = 6.8
Identities = 11/41 (26%), Positives = 22/41 (53%)
Frame = +3
Query: 255 TLYEGGFFKAHLNFPKEYPLRPPRMKFVTEIWHPNIDKNGD 377
T++E + + YP +PP +KFV++I ++ G+
Sbjct: 1 TVFENRIYNLKIVCGPNYPQKPPTVKFVSKINMNGVNSKGE 41
>SB_36855| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 115
Score = 28.3 bits (60), Expect = 6.8
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = -3
Query: 396 EVLICRHHHFYQYLDAIFQSQISSGVVSKDIPWEN 292
+VLI H H Y+ L ++ Q+ +G SK+ P+ N
Sbjct: 3 DVLIWAHEHSYEKLFPVYNRQMCNG--SKEAPYTN 35
>SB_35256| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 41
Score = 28.3 bits (60), Expect = 6.8
Identities = 11/41 (26%), Positives = 22/41 (53%)
Frame = +3
Query: 255 TLYEGGFFKAHLNFPKEYPLRPPRMKFVTEIWHPNIDKNGD 377
T++E + + YP +PP +KFV++I ++ G+
Sbjct: 1 TVFENRIYNLKIVCGPNYPQKPPTVKFVSKINMNGVNSKGE 41
>SB_36850| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1008
Score = 27.9 bits (59), Expect = 9.0
Identities = 29/103 (28%), Positives = 46/103 (44%), Gaps = 2/103 (1%)
Frame = -2
Query: 349 HISVTNF--IRGGLKGYSLGKFKCALKKPPSYSVSGGPIMRTSHLYISLSSIKPAEKPST 176
H+S+TN I+ L G+ L K A K+ + + G ++R S L I + KP
Sbjct: 79 HVSLTNNNNIKICLFGFQLAK---AEKQTTNSHIDDG-VIRASGLDIGIKQTSDNNKPQH 134
Query: 175 GFLFSSEIKKDLKDTHFTNDNAQIGRLWTFNRIVRQ*CEPLPN 47
+S+ KK KD H + L +I+ Q P+P+
Sbjct: 135 NQKNTSKKKKKRKDRHRKKQDQDPEPL-KEKKILTQPTNPIPS 176
>SB_42488| Best HMM Match : ig (HMM E-Value=4.2e-06)
Length = 464
Score = 27.9 bits (59), Expect = 9.0
Identities = 26/89 (29%), Positives = 37/89 (41%), Gaps = 8/89 (8%)
Frame = +3
Query: 204 DDNDIYKWEVLIIGPPDTLYEGGFFKAHLNFPKEYPLRPPRMKFVTEIWH-PNIDKNGDV 380
D++ I + +I+ PD Y G F N P R FV + H P ID+
Sbjct: 305 DEDFIQATDGIIVERPDVDYHSGMFLCISN----NPFGTARKYFVVNVPHAPEIDRANTP 360
Query: 381 CISILHEPGDDKW-------GYEKASERW 446
+ IL +PG + GY + S RW
Sbjct: 361 KV-ILRKPGPSTFTVYFKHLGYPEPSIRW 388
>SB_21169| Best HMM Match : zf-CHY (HMM E-Value=2.1e-09)
Length = 2059
Score = 27.9 bits (59), Expect = 9.0
Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Frame = +3
Query: 537 AKEWRERYSEFKKKVA-RCVRKSQEDCF*EQKDI*KRIYILLKKGHCDTGKHFTTNTEKR 713
+KE RE + K + RC+ +E E+ D + L + C KHFT N +K
Sbjct: 1881 SKECRESLRKAKDAIRLRCLTCLREQDITEESDSCQSCKAPLAEFFCGICKHFTGNEKKP 1940
Query: 714 Y 716
Y
Sbjct: 1941 Y 1941
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,522,084
Number of Sequences: 59808
Number of extensions: 496646
Number of successful extensions: 1514
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1400
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1504
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1962001171
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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