Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte10n05
(731 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g46460.1 68416.m05037 ubiquitin-conjugating enzyme 13 (UBC13)... 239 1e-63
At3g55380.1 68416.m06151 ubiquitin-conjugating enzyme 14 (UBC14)... 235 2e-62
At5g59300.1 68418.m07430 ubiquitin-conjugating enzyme 7 (UBC7) E... 213 1e-55
At5g62540.1 68418.m07849 ubiquitin-conjugating enzyme 3 (UBC3) E... 116 1e-26
At2g02760.1 68415.m00219 ubiquitin-conjugating enzyme 2 (UBC2) E... 112 3e-25
At1g14400.2 68414.m01708 ubiquitin-conjugating enzyme 1 (UBC1) E... 111 3e-25
At1g14400.1 68414.m01707 ubiquitin-conjugating enzyme 1 (UBC1) E... 111 3e-25
At3g08690.1 68416.m01010 ubiquitin-conjugating enzyme 11 (UBC11)... 107 7e-24
At3g08700.1 68416.m01011 ubiquitin-conjugating enzyme, putative ... 105 4e-23
At1g78870.2 68414.m09194 ubiquitin-conjugating enzyme, putative ... 103 1e-22
At4g27960.2 68417.m04012 ubiquitin-conjugating enzyme E2-17 kDa ... 103 2e-22
At4g27960.1 68417.m04011 ubiquitin-conjugating enzyme E2-17 kDa ... 103 2e-22
At1g64230.1 68414.m07276 ubiquitin-conjugating enzyme, putative ... 102 2e-22
At1g16890.2 68414.m02044 ubiquitin-conjugating enzyme, putative ... 101 4e-22
At5g41700.2 68418.m05070 ubiquitin-conjugating enzyme 8 (UBC8) E... 101 5e-22
At5g41700.1 68418.m05069 ubiquitin-conjugating enzyme 8 (UBC8) E... 101 5e-22
At5g53300.2 68418.m06625 ubiquitin-conjugating enzyme 10 (UBC10)... 101 7e-22
At5g53300.1 68418.m06624 ubiquitin-conjugating enzyme 10 (UBC10)... 101 7e-22
At5g56150.2 68418.m07005 ubiquitin-conjugating enzyme, putative ... 100 9e-22
At5g56150.1 68418.m07004 ubiquitin-conjugating enzyme, putative ... 100 9e-22
At2g16740.1 68415.m01920 ubiquitin-conjugating enzyme, putative ... 99 3e-21
At5g41700.4 68418.m05071 ubiquitin-conjugating enzyme 8 (UBC8) E... 95 3e-20
At1g16890.1 68414.m02043 ubiquitin-conjugating enzyme, putative ... 95 3e-20
At5g25760.1 68418.m03057 ubiquitin-conjugating enzyme, putative ... 95 6e-20
At1g50490.1 68414.m05662 ubiquitin-conjugating enzyme 20 (UBC20)... 95 6e-20
At1g36340.1 68414.m04516 ubiquitin-conjugating enzyme family pro... 93 1e-19
At3g20060.1 68416.m02537 ubiquitin-conjugating enzyme 19 (UBC19)... 90 2e-18
At5g41700.3 68418.m05068 ubiquitin-conjugating enzyme 8 (UBC8) E... 85 5e-17
At3g13550.1 68416.m01703 ubiquitin-conjugating enzyme (COP10) id... 85 5e-17
At1g78870.1 68414.m09193 ubiquitin-conjugating enzyme, putative ... 84 1e-16
At3g57870.1 68416.m06451 ubiquitin-conjugating enzyme, putative ... 80 1e-15
At3g24515.1 68416.m03077 ubiquitin-conjugating enzyme, putative ... 80 2e-15
At5g50870.1 68418.m06304 ubiquitin-conjugating enzyme, putative ... 79 2e-15
At2g32790.1 68415.m04014 ubiquitin-conjugating enzyme, putative ... 72 5e-13
At1g45050.1 68414.m05165 ubiquitin-conjugating enzyme 15 (UBC15)... 71 8e-13
At2g18600.1 68415.m02166 RUB1-conjugating enzyme, putative stron... 70 1e-12
At5g42990.1 68418.m05243 ubiquitin-conjugating enzyme 18 (UBC18)... 69 2e-12
At5g05080.1 68418.m00539 ubiquitin-conjugating enzyme, putative ... 69 2e-12
At1g75440.1 68414.m08763 ubiquitin-conjugating enzyme 16 (UBC16)... 68 6e-12
At1g63800.1 68414.m07220 ubiquitin-conjugating enzyme 5 (UBC5) E... 67 1e-11
At3g17000.1 68416.m02171 ubiquitin-conjugating enzyme, putative ... 65 4e-11
At2g46030.1 68415.m05726 ubiquitin-conjugating enzyme 6 (UBC6) E... 65 4e-11
At5g41340.1 68418.m05024 ubiquitin-conjugating enzyme 4 (UBC4) E... 64 7e-11
At4g36410.1 68417.m05173 ubiquitin-conjugating enzyme 17 (UBC17)... 57 1e-08
At1g23260.1 68414.m02910 ubiquitin-conjugating enzyme family pro... 52 3e-07
At5g50430.1 68418.m06245 ubiquitin-conjugating enzyme, putative ... 50 2e-06
At1g17280.1 68414.m02105 ubiquitin-conjugating enzyme, putative ... 48 5e-06
At2g36060.1 68415.m04427 ubiquitin-conjugating enzyme family pro... 46 3e-05
At3g52560.1 68416.m05784 ubiquitin-conjugating enzyme family pro... 46 3e-05
At1g53020.1 68414.m06002 ubiquitin-conjugating enzyme family pro... 46 3e-05
At1g70660.1 68414.m08146 ubiquitin-conjugating enzyme family pro... 44 1e-04
At2g36060.2 68415.m04428 ubiquitin-conjugating enzyme family pro... 42 6e-04
At2g16920.1 68415.m01949 ubiquitin-conjugating enzyme family pro... 42 6e-04
At3g52560.2 68416.m05785 ubiquitin-conjugating enzyme family pro... 41 7e-04
At3g15355.1 68416.m01945 ubiquitin-conjugating enzyme-related si... 40 0.002
At2g33770.1 68415.m04141 ubiquitin-conjugating enzyme family pro... 40 0.002
At1g44000.1 68414.m05076 expressed protein 34 0.085
At4g10560.1 68417.m01729 DC1 domain-containing protein contains ... 32 0.45
At1g79830.1 68414.m09326 expressed protein weak similarity to TA... 31 1.0
At1g48490.1 68414.m05420 protein kinase, putative similar to inc... 30 1.4
At2g20420.1 68415.m02383 succinyl-CoA ligase [GDP-forming] beta-... 30 1.8
At3g23790.1 68416.m02990 AMP-binding protein, putative similar t... 29 2.4
At2g33170.1 68415.m04064 leucine-rich repeat transmembrane prote... 29 3.2
At1g50750.1 68414.m05707 expressed protein 29 3.2
At5g22680.1 68418.m02650 hypothetical protein 28 5.6
At2g02680.1 68415.m00207 DC1 domain-containing protein contains ... 28 5.6
At1g63080.1 68414.m07126 pentatricopeptide (PPR) repeat-containi... 28 7.3
At5g05880.1 68418.m00647 UDP-glucoronosyl/UDP-glucosyl transfera... 27 9.7
At5g03360.1 68418.m00289 DC1 domain-containing protein contains ... 27 9.7
At2g02690.1 68415.m00208 hypothetical protein 27 9.7
At1g52930.1 68414.m05985 brix domain-containing protein contains... 27 9.7
>At3g46460.1 68416.m05037 ubiquitin-conjugating enzyme 13 (UBC13)
E2; identical to gi:992706
Length = 166
Score = 239 bits (586), Expect = 1e-63
Identities = 103/150 (68%), Positives = 128/150 (85%)
Frame = +3
Query: 159 ELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLNFPKEYPLRPPRMKFV 338
+L K+PV+GFSAGL+D+ +I++W V IIGPPDTLYEGGFF A ++FP+ YP PP ++F
Sbjct: 15 DLCKHPVDGFSAGLVDEKNIFEWSVTIIGPPDTLYEGGFFYAIMSFPQNYPNSPPTVRFT 74
Query: 339 TEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETILISVISMLADPNDES 518
++IWHPN+ +G VCISILH PGDD GYE ASERW PVHTVE+I++S+ISML+ PNDES
Sbjct: 75 SDIWHPNVYPDGRVCISILHPPGDDPSGYELASERWTPVHTVESIMLSIISMLSGPNDES 134
Query: 519 PANVDAAKEWRERYSEFKKKVARCVRKSQE 608
PANV+AAKEWRE+ EFKKKV+RCVRKSQE
Sbjct: 135 PANVEAAKEWREKRDEFKKKVSRCVRKSQE 164
>At3g55380.1 68416.m06151 ubiquitin-conjugating enzyme 14 (UBC14)
E2; UbcAT3; identical to gi:2129757, S46656
Length = 167
Score = 235 bits (575), Expect = 2e-62
Identities = 98/150 (65%), Positives = 127/150 (84%)
Frame = +3
Query: 159 ELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLNFPKEYPLRPPRMKFV 338
+L K PV+GFSAGL+D+ ++++W V I+GPPDTLYEGGFF A ++FP+ YP+ PP + F
Sbjct: 16 DLCKKPVDGFSAGLVDEKNVFQWSVSIMGPPDTLYEGGFFNAIMSFPENYPVSPPTVTFT 75
Query: 339 TEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETILISVISMLADPNDES 518
+E+WHPN+ +G VCISILH PGDD GYE ASERW PVHTVE+I++S+ISML+ PNDES
Sbjct: 76 SEMWHPNVYSDGKVCISILHPPGDDPHGYELASERWTPVHTVESIVLSIISMLSGPNDES 135
Query: 519 PANVDAAKEWRERYSEFKKKVARCVRKSQE 608
PANV+AAKEWR+ +EF+KKV+RCVR+SQE
Sbjct: 136 PANVEAAKEWRDNRAEFRKKVSRCVRRSQE 165
>At5g59300.1 68418.m07430 ubiquitin-conjugating enzyme 7 (UBC7) E2;
identical to gi:992703, SP:P42747
Length = 198
Score = 213 bits (520), Expect = 1e-55
Identities = 91/135 (67%), Positives = 112/135 (82%)
Frame = +3
Query: 204 DDNDIYKWEVLIIGPPDTLYEGGFFKAHLNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVC 383
D +I++W V IIGPPDTLYEGGFF A + FP+ YP PP ++F +++WHPN+ +G VC
Sbjct: 62 DCYNIFEWSVTIIGPPDTLYEGGFFNAIMTFPQNYPNSPPTVRFTSDMWHPNVYSDGRVC 121
Query: 384 ISILHEPGDDKWGYEKASERWLPVHTVETILISVISMLADPNDESPANVDAAKEWRERYS 563
ISILH PGDD GYE ASERW PVHTVE+I++S+ISML+ PNDESPANV+AAKEWR++
Sbjct: 122 ISILHPPGDDPSGYELASERWTPVHTVESIMLSIISMLSGPNDESPANVEAAKEWRDKRD 181
Query: 564 EFKKKVARCVRKSQE 608
EFKKKV+RCVRKSQE
Sbjct: 182 EFKKKVSRCVRKSQE 196
>At5g62540.1 68418.m07849 ubiquitin-conjugating enzyme 3 (UBC3) E2;
identical to gi:431261, SP:P42746
Length = 150
Score = 116 bits (280), Expect = 1e-26
Identities = 58/147 (39%), Positives = 87/147 (59%)
Frame = +3
Query: 162 LNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLNFPKEYPLRPPRMKFVT 341
L K+P G S G DN+I W LI GP DT ++GG FK L+F ++YP +PP ++FV+
Sbjct: 16 LQKDPPVGIS-GAPQDNNIMHWNALIFGPEDTPWDGGTFKLTLHFTEDYPNKPPIVRFVS 74
Query: 342 EIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETILISVISMLADPNDESP 521
++HPNI +G +C+ IL +W P++ V +L S+ S+L DPN +SP
Sbjct: 75 RMFHPNIYADGSICLDIL-------------QNQWSPIYDVAAVLTSIQSLLCDPNPDSP 121
Query: 522 ANVDAAKEWRERYSEFKKKVARCVRKS 602
AN +AA+ + E E+ +KV V +S
Sbjct: 122 ANAEAARLFSENKREYNRKVIEIVEQS 148
>At2g02760.1 68415.m00219 ubiquitin-conjugating enzyme 2 (UBC2) E2;
identical to gi:2689242, SP:P42745
Length = 152
Score = 112 bits (269), Expect = 3e-25
Identities = 56/147 (38%), Positives = 85/147 (57%)
Frame = +3
Query: 162 LNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLNFPKEYPLRPPRMKFVT 341
L ++P G S G DN+I W +I GP DT ++GG FK L F ++YP +PP ++FV+
Sbjct: 16 LQQDPPAGIS-GAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVS 74
Query: 342 EIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETILISVISMLADPNDESP 521
++HPNI +G +C+ IL +W P++ V IL S+ S+L DPN SP
Sbjct: 75 RMFHPNIYADGSICLDIL-------------QNQWSPIYDVAAILTSIQSLLCDPNPNSP 121
Query: 522 ANVDAAKEWRERYSEFKKKVARCVRKS 602
AN +AA+ + E E+ ++V V +S
Sbjct: 122 ANSEAARMFSESKREYNRRVREVVEQS 148
>At1g14400.2 68414.m01708 ubiquitin-conjugating enzyme 1 (UBC1) E2;
identical to gi:431259, SP:P25865
Length = 152
Score = 111 bits (268), Expect = 3e-25
Identities = 56/147 (38%), Positives = 85/147 (57%)
Frame = +3
Query: 162 LNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLNFPKEYPLRPPRMKFVT 341
L ++P G S G DN+I W +I GP DT ++GG FK L F ++YP +PP ++FV+
Sbjct: 16 LQQDPPAGIS-GAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVS 74
Query: 342 EIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETILISVISMLADPNDESP 521
++HPNI +G +C+ IL +W P++ V IL S+ S+L DPN SP
Sbjct: 75 RMFHPNIYADGSICLDIL-------------QNQWSPIYDVAAILTSIQSLLCDPNPNSP 121
Query: 522 ANVDAAKEWRERYSEFKKKVARCVRKS 602
AN +AA+ + E E+ ++V V +S
Sbjct: 122 ANSEAARMYSESKREYNRRVRDVVEQS 148
>At1g14400.1 68414.m01707 ubiquitin-conjugating enzyme 1 (UBC1) E2;
identical to gi:431259, SP:P25865
Length = 152
Score = 111 bits (268), Expect = 3e-25
Identities = 56/147 (38%), Positives = 85/147 (57%)
Frame = +3
Query: 162 LNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLNFPKEYPLRPPRMKFVT 341
L ++P G S G DN+I W +I GP DT ++GG FK L F ++YP +PP ++FV+
Sbjct: 16 LQQDPPAGIS-GAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVS 74
Query: 342 EIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETILISVISMLADPNDESP 521
++HPNI +G +C+ IL +W P++ V IL S+ S+L DPN SP
Sbjct: 75 RMFHPNIYADGSICLDIL-------------QNQWSPIYDVAAILTSIQSLLCDPNPNSP 121
Query: 522 ANVDAAKEWRERYSEFKKKVARCVRKS 602
AN +AA+ + E E+ ++V V +S
Sbjct: 122 ANSEAARMYSESKREYNRRVRDVVEQS 148
>At3g08690.1 68416.m01010 ubiquitin-conjugating enzyme 11 (UBC11)
E2; identical to gi:12643427, SP:P35134
Length = 148
Score = 107 bits (257), Expect = 7e-24
Identities = 48/147 (32%), Positives = 84/147 (57%)
Frame = +3
Query: 159 ELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLNFPKEYPLRPPRMKFV 338
+L K+P SAG + + D++ W+ I+GPP++ Y GG F ++FP +YP +PP++ F
Sbjct: 12 DLQKDPPSNCSAGPVAE-DMFHWQATIMGPPESPYAGGVFLVSIHFPPDYPFKPPKVSFK 70
Query: 339 TEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETILISVISMLADPNDES 518
T+++HPNI+ NG +C+ IL E+W P T+ +L+S+ S+L DPN +
Sbjct: 71 TKVYHPNINSNGSICLDIL-------------KEQWSPALTISKVLLSICSLLTDPNPDD 117
Query: 519 PANVDAAKEWRERYSEFKKKVARCVRK 599
P + A ++ S+++ +K
Sbjct: 118 PLVPEIAHMYKTDRSKYESTARSWTQK 144
>At3g08700.1 68416.m01011 ubiquitin-conjugating enzyme, putative
strong similar to ubiquitin-conjugating enzymes E2-17
from [Arabidopsis thaliana] SP|P35134, SP|P35132,
SP|P35133; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 149
Score = 105 bits (251), Expect = 4e-23
Identities = 46/147 (31%), Positives = 80/147 (54%)
Frame = +3
Query: 159 ELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLNFPKEYPLRPPRMKFV 338
++ ++P SAG + + DI+ W+ I+GP D+ Y GG F ++F +YP +PP++ F
Sbjct: 12 DMQRHPPANCSAGPVAEEDIFHWQATIMGPHDSPYSGGVFTVSIDFSSDYPFKPPKVNFK 71
Query: 339 TEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETILISVISMLADPNDES 518
T+++HPNID G +C+ IL E+W P T +L+S+ S+L DPN
Sbjct: 72 TKVYHPNIDSKGSICLDIL-------------KEQWSPAPTTSKVLLSICSLLTDPNPND 118
Query: 519 PANVDAAKEWRERYSEFKKKVARCVRK 599
P + A ++ S+++ + +K
Sbjct: 119 PLVPEIAHLYKVDKSKYESTAQKWTQK 145
>At1g78870.2 68414.m09194 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 153
Score = 103 bits (247), Expect = 1e-22
Identities = 50/135 (37%), Positives = 79/135 (58%)
Frame = +3
Query: 162 LNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLNFPKEYPLRPPRMKFVT 341
L P G SA +DN Y + V+I+GP + YEGG FK L P+EYP+ P+++F+T
Sbjct: 17 LLSEPAPGISASPSEDNMRY-FNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLT 75
Query: 342 EIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETILISVISMLADPNDESP 521
+I+HPNIDK G +C+ IL ++W P + T+L+S+ ++L+ PN + P
Sbjct: 76 KIYHPNIDKLGRICLDIL-------------KDKWSPALQIRTVLLSIQALLSAPNPDDP 122
Query: 522 ANVDAAKEWRERYSE 566
+ + AK W+ +E
Sbjct: 123 LSENIAKHWKSNEAE 137
>At4g27960.2 68417.m04012 ubiquitin-conjugating enzyme E2-17 kDa 9
(UBC9) E2; identical to gi:297883, SP:P35132; identical
to cDNA UBC9 for ubiquitin conjugating enzyme homolog
GI:297883
Length = 178
Score = 103 bits (246), Expect = 2e-22
Identities = 47/147 (31%), Positives = 83/147 (56%)
Frame = +3
Query: 159 ELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLNFPKEYPLRPPRMKFV 338
+L K+P SAG + + D++ W+ I+GP D+ Y GG F ++FP +YP +PP++ F
Sbjct: 42 DLQKDPPTSCSAGPVAE-DMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYPFKPPKVAFR 100
Query: 339 TEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETILISVISMLADPNDES 518
T+++HPNI+ NG +C+ IL E+W P T+ +L+S+ S+L DPN +
Sbjct: 101 TKVFHPNINSNGSICLDIL-------------KEQWSPALTISKVLLSICSLLTDPNPDD 147
Query: 519 PANVDAAKEWRERYSEFKKKVARCVRK 599
P + A ++ ++++ +K
Sbjct: 148 PLVPEIAHMYKTDKNKYESTARTWTQK 174
>At4g27960.1 68417.m04011 ubiquitin-conjugating enzyme E2-17 kDa 9
(UBC9) E2; identical to gi:297883, SP:P35132; identical
to cDNA UBC9 for ubiquitin conjugating enzyme homolog
GI:297883
Length = 148
Score = 103 bits (246), Expect = 2e-22
Identities = 47/147 (31%), Positives = 83/147 (56%)
Frame = +3
Query: 159 ELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLNFPKEYPLRPPRMKFV 338
+L K+P SAG + + D++ W+ I+GP D+ Y GG F ++FP +YP +PP++ F
Sbjct: 12 DLQKDPPTSCSAGPVAE-DMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYPFKPPKVAFR 70
Query: 339 TEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETILISVISMLADPNDES 518
T+++HPNI+ NG +C+ IL E+W P T+ +L+S+ S+L DPN +
Sbjct: 71 TKVFHPNINSNGSICLDIL-------------KEQWSPALTISKVLLSICSLLTDPNPDD 117
Query: 519 PANVDAAKEWRERYSEFKKKVARCVRK 599
P + A ++ ++++ +K
Sbjct: 118 PLVPEIAHMYKTDKNKYESTARTWTQK 144
>At1g64230.1 68414.m07276 ubiquitin-conjugating enzyme, putative
identical or nearly so to Ubiquitin-conjugating enzymes
SP|P35132, SP|P35131, SP|P35133 from {Arabidopsis
thaliana}; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 102 bits (245), Expect = 2e-22
Identities = 46/147 (31%), Positives = 83/147 (56%)
Frame = +3
Query: 159 ELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLNFPKEYPLRPPRMKFV 338
+L K+P SAG + + D++ W+ I+GP D+ Y GG F ++FP +YP +PP++ F
Sbjct: 12 DLQKDPPTSCSAGPVAE-DMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYPFKPPKVAFR 70
Query: 339 TEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETILISVISMLADPNDES 518
T+++HPN++ NG +C+ IL E+W P T+ +L+S+ S+L DPN +
Sbjct: 71 TKVFHPNVNSNGSICLDIL-------------KEQWSPALTISKVLLSICSLLTDPNPDD 117
Query: 519 PANVDAAKEWRERYSEFKKKVARCVRK 599
P + A ++ ++++ +K
Sbjct: 118 PLVPEIAHMYKTDRAKYESTARSWTQK 144
>At1g16890.2 68414.m02044 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 153
Score = 101 bits (243), Expect = 4e-22
Identities = 49/135 (36%), Positives = 79/135 (58%)
Frame = +3
Query: 162 LNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLNFPKEYPLRPPRMKFVT 341
L P G SA ++N Y + V+I+GP + YEGG FK L P+EYP+ P+++F+T
Sbjct: 17 LLSEPAPGISASPSEENMRY-FNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLT 75
Query: 342 EIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETILISVISMLADPNDESP 521
+I+HPNIDK G +C+ IL ++W P + T+L+S+ ++L+ PN + P
Sbjct: 76 KIYHPNIDKLGRICLDIL-------------KDKWSPALQIRTVLLSIQALLSAPNPDDP 122
Query: 522 ANVDAAKEWRERYSE 566
+ + AK W+ +E
Sbjct: 123 LSENIAKHWKSNEAE 137
>At5g41700.2 68418.m05070 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 148
Score = 101 bits (242), Expect = 5e-22
Identities = 46/147 (31%), Positives = 83/147 (56%)
Frame = +3
Query: 159 ELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLNFPKEYPLRPPRMKFV 338
+L K+P SAG + + D++ W+ I+GP ++ Y GG F ++FP +YP +PP++ F
Sbjct: 12 DLQKDPPTSCSAGPVAE-DMFHWQATIMGPAESPYSGGVFLVTIHFPPDYPFKPPKVAFR 70
Query: 339 TEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETILISVISMLADPNDES 518
T+++HPNI+ NG +C+ IL E+W P T+ +L+S+ S+L DPN +
Sbjct: 71 TKVFHPNINSNGSICLDIL-------------KEQWSPALTISKVLLSICSLLTDPNPDD 117
Query: 519 PANVDAAKEWRERYSEFKKKVARCVRK 599
P + A ++ ++++ +K
Sbjct: 118 PLVPEIAHMYKTDRAKYEATARNWTQK 144
>At5g41700.1 68418.m05069 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 148
Score = 101 bits (242), Expect = 5e-22
Identities = 46/147 (31%), Positives = 83/147 (56%)
Frame = +3
Query: 159 ELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLNFPKEYPLRPPRMKFV 338
+L K+P SAG + + D++ W+ I+GP ++ Y GG F ++FP +YP +PP++ F
Sbjct: 12 DLQKDPPTSCSAGPVAE-DMFHWQATIMGPAESPYSGGVFLVTIHFPPDYPFKPPKVAFR 70
Query: 339 TEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETILISVISMLADPNDES 518
T+++HPNI+ NG +C+ IL E+W P T+ +L+S+ S+L DPN +
Sbjct: 71 TKVFHPNINSNGSICLDIL-------------KEQWSPALTISKVLLSICSLLTDPNPDD 117
Query: 519 PANVDAAKEWRERYSEFKKKVARCVRK 599
P + A ++ ++++ +K
Sbjct: 118 PLVPEIAHMYKTDRAKYEATARNWTQK 144
>At5g53300.2 68418.m06625 ubiquitin-conjugating enzyme 10 (UBC10)
E2; identical to gi:297877, SP:P35133
Length = 148
Score = 101 bits (241), Expect = 7e-22
Identities = 46/147 (31%), Positives = 83/147 (56%)
Frame = +3
Query: 159 ELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLNFPKEYPLRPPRMKFV 338
+L K+P SAG + + D++ W+ I+GP ++ Y GG F ++FP +YP +PP++ F
Sbjct: 12 DLQKDPPTSCSAGPVAE-DMFHWQATIMGPSESPYAGGVFLVTIHFPPDYPFKPPKVAFR 70
Query: 339 TEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETILISVISMLADPNDES 518
T+++HPNI+ NG +C+ IL E+W P T+ +L+S+ S+L DPN +
Sbjct: 71 TKVFHPNINSNGSICLDIL-------------KEQWSPALTISKVLLSICSLLTDPNPDD 117
Query: 519 PANVDAAKEWRERYSEFKKKVARCVRK 599
P + A ++ ++++ +K
Sbjct: 118 PLVPEIAHMYKTDKNKYESTARSWTQK 144
>At5g53300.1 68418.m06624 ubiquitin-conjugating enzyme 10 (UBC10)
E2; identical to gi:297877, SP:P35133
Length = 148
Score = 101 bits (241), Expect = 7e-22
Identities = 46/147 (31%), Positives = 83/147 (56%)
Frame = +3
Query: 159 ELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLNFPKEYPLRPPRMKFV 338
+L K+P SAG + + D++ W+ I+GP ++ Y GG F ++FP +YP +PP++ F
Sbjct: 12 DLQKDPPTSCSAGPVAE-DMFHWQATIMGPSESPYAGGVFLVTIHFPPDYPFKPPKVAFR 70
Query: 339 TEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETILISVISMLADPNDES 518
T+++HPNI+ NG +C+ IL E+W P T+ +L+S+ S+L DPN +
Sbjct: 71 TKVFHPNINSNGSICLDIL-------------KEQWSPALTISKVLLSICSLLTDPNPDD 117
Query: 519 PANVDAAKEWRERYSEFKKKVARCVRK 599
P + A ++ ++++ +K
Sbjct: 118 PLVPEIAHMYKTDKNKYESTARSWTQK 144
>At5g56150.2 68418.m07005 ubiquitin-conjugating enzyme, putative
strong similarity to ubiquitin-conjugating enzyme UBC2
[Mesembryanthemum crystallinum] GI:5762457, UBC4 [Pisum
sativum] GI:456568; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 100 bits (240), Expect = 9e-22
Identities = 45/121 (37%), Positives = 73/121 (60%)
Frame = +3
Query: 159 ELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLNFPKEYPLRPPRMKFV 338
+L ++P SAG D D+++W+ I+GP D+ + GG F ++FP +YP +PP++ F
Sbjct: 12 DLQRDPPVSCSAGPTGD-DMFQWQATIMGPADSPFAGGVFLVTIHFPPDYPFKPPKVAFR 70
Query: 339 TEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETILISVISMLADPNDES 518
T+++HPNI+ NG +C+ IL E+W P TV +L+S+ S+L DPN +
Sbjct: 71 TKVYHPNINSNGSICLDIL-------------KEQWSPALTVSKVLLSICSLLTDPNPDD 117
Query: 519 P 521
P
Sbjct: 118 P 118
>At5g56150.1 68418.m07004 ubiquitin-conjugating enzyme, putative
strong similarity to ubiquitin-conjugating enzyme UBC2
[Mesembryanthemum crystallinum] GI:5762457, UBC4 [Pisum
sativum] GI:456568; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 100 bits (240), Expect = 9e-22
Identities = 45/121 (37%), Positives = 73/121 (60%)
Frame = +3
Query: 159 ELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLNFPKEYPLRPPRMKFV 338
+L ++P SAG D D+++W+ I+GP D+ + GG F ++FP +YP +PP++ F
Sbjct: 12 DLQRDPPVSCSAGPTGD-DMFQWQATIMGPADSPFAGGVFLVTIHFPPDYPFKPPKVAFR 70
Query: 339 TEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETILISVISMLADPNDES 518
T+++HPNI+ NG +C+ IL E+W P TV +L+S+ S+L DPN +
Sbjct: 71 TKVYHPNINSNGSICLDIL-------------KEQWSPALTVSKVLLSICSLLTDPNPDD 117
Query: 519 P 521
P
Sbjct: 118 P 118
>At2g16740.1 68415.m01920 ubiquitin-conjugating enzyme, putative
strong similarity to SP|P35133 Ubiquitin-conjugating
enzyme E2-17 kDa 10 (EC 6.3.2.19) (Ubiquitin- protein
ligase 10) (Ubiquitin carrier protein 10) {Arabidopsis
thaliana}; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 98.7 bits (235), Expect = 3e-21
Identities = 43/121 (35%), Positives = 74/121 (61%)
Frame = +3
Query: 159 ELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLNFPKEYPLRPPRMKFV 338
EL ++P SAG + D++ W+ I+GP ++ Y GG F +++FP +YP +PP++ F
Sbjct: 12 ELQRDPPVSCSAGPTGE-DMFHWQATIMGPNESPYSGGVFLVNIHFPPDYPFKPPKVVFR 70
Query: 339 TEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETILISVISMLADPNDES 518
T+++HPNI+ NG++C+ IL ++W P T+ +L+S+ S+L DPN +
Sbjct: 71 TKVFHPNINSNGNICLDIL-------------KDQWSPALTISKVLLSICSLLTDPNPDD 117
Query: 519 P 521
P
Sbjct: 118 P 118
>At5g41700.4 68418.m05071 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 149
Score = 95.5 bits (227), Expect = 3e-20
Identities = 45/148 (30%), Positives = 82/148 (55%), Gaps = 1/148 (0%)
Frame = +3
Query: 159 ELNKNPVEG-FSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLNFPKEYPLRPPRMKF 335
+L K+P AG + + D++ W+ I+GP ++ Y GG F ++FP +YP +PP++ F
Sbjct: 12 DLQKDPPTSCIFAGPVAE-DMFHWQATIMGPAESPYSGGVFLVTIHFPPDYPFKPPKVAF 70
Query: 336 VTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETILISVISMLADPNDE 515
T+++HPNI+ NG +C+ IL E+W P T+ +L+S+ S+L DPN +
Sbjct: 71 RTKVFHPNINSNGSICLDIL-------------KEQWSPALTISKVLLSICSLLTDPNPD 117
Query: 516 SPANVDAAKEWRERYSEFKKKVARCVRK 599
P + A ++ ++++ +K
Sbjct: 118 DPLVPEIAHMYKTDRAKYEATARNWTQK 145
>At1g16890.1 68414.m02043 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 120
Score = 95.5 bits (227), Expect = 3e-20
Identities = 42/114 (36%), Positives = 70/114 (61%)
Frame = +3
Query: 225 WEVLIIGPPDTLYEGGFFKAHLNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEP 404
+ V+I+GP + YEGG FK L P+EYP+ P+++F+T+I+HPNIDK G +C+ IL
Sbjct: 4 FNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDIL--- 60
Query: 405 GDDKWGYEKASERWLPVHTVETILISVISMLADPNDESPANVDAAKEWRERYSE 566
++W P + T+L+S+ ++L+ PN + P + + AK W+ +E
Sbjct: 61 ----------KDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKSNEAE 104
>At5g25760.1 68418.m03057 ubiquitin-conjugating enzyme, putative
similar to SP|O60015 Ubiquitin-conjugating enzyme E2-21
kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin
carrier protein) {Pichia angusta}; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 157
Score = 94.7 bits (225), Expect = 6e-20
Identities = 42/114 (36%), Positives = 71/114 (62%), Gaps = 1/114 (0%)
Frame = +3
Query: 198 LIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLNFPKEYPLRPPRMKFVTEIWHPNID-KNG 374
+ DD +I+KW LI GP +T YEGG F+ + P+ YPL+PP+++F+T+I+HPN+ K G
Sbjct: 28 ICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPEPYPLQPPQVRFLTKIFHPNVHFKTG 87
Query: 375 DVCISILHEPGDDKWGYEKASERWLPVHTVETILISVISMLADPNDESPANVDA 536
++C+ IL W P T++++ ++I+++A P +SP N D+
Sbjct: 88 EICLDIL-------------KNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDS 128
>At1g50490.1 68414.m05662 ubiquitin-conjugating enzyme 20 (UBC20)
nearly identical to ubiquitin-conjugating enzyme UBC20
[Arabidopsis thaliana] GI:22530867; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 180
Score = 94.7 bits (225), Expect = 6e-20
Identities = 49/135 (36%), Positives = 78/135 (57%)
Frame = +3
Query: 183 GFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLNFPKEYPLRPPRMKFVTEIWHPNI 362
G SA +DN I+ W+ I G DT++EG ++ L+F +YP +PP++KF T +HPN+
Sbjct: 54 GISAFPEEDN-IFCWKGTITGSKDTVFEGTEYRLSLSFSNDYPFKPPKVKFETCCFHPNV 112
Query: 363 DKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETILISVISMLADPNDESPANVDAAK 542
D G++C+ IL ++W + V TIL+S+ S+L +PN SP N AA+
Sbjct: 113 DVYGNICLDIL-------------QDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQ 159
Query: 543 EWRERYSEFKKKVAR 587
W + E++K V +
Sbjct: 160 LWSNQ-EEYRKMVEK 173
>At1g36340.1 68414.m04516 ubiquitin-conjugating enzyme family
protein similar to Ubiquitin-conjugating enzyme E2-16
kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin
carrier protein) from {Schizosaccharomyces pombe}
SP|P46595, {Caenorhabditis elegans} SP|P35129; contains
Pfam profile PF00179: Ubiquitin-conjugating enzyme
Length = 154
Score = 93.5 bits (222), Expect = 1e-19
Identities = 44/131 (33%), Positives = 72/131 (54%)
Frame = +3
Query: 186 FSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLNFPKEYPLRPPRMKFVTEIWHPNID 365
FS G + N+IY+W +I GP T YEGG F + FP +YP +PP+ F T I+HPNI+
Sbjct: 27 FSIGQ-NSNNIYEWTAVIRGPDGTPYEGGMFNLSIKFPTDYPFKPPKFTFKTPIYHPNIN 85
Query: 366 KNGDVCISILHEPGDDKWGYEKASERWLPVHTVETILISVISMLADPNDESPANVDAAKE 545
G +C++IL ++W P VE +L+S++ +L PN + P + +
Sbjct: 86 DEGSICMNIL-------------KDKWTPALMVEKVLLSILLLLEKPNPDDPLVPEIGQL 132
Query: 546 WRERYSEFKKK 578
++ +F ++
Sbjct: 133 FKNNRFQFDQR 143
>At3g20060.1 68416.m02537 ubiquitin-conjugating enzyme 19 (UBC19)
nearly identical to ubiquitin-conjugating enzyme UBC19
[Arabidopsis thaliana] GI:22530865; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 181
Score = 89.8 bits (213), Expect = 2e-18
Identities = 48/135 (35%), Positives = 76/135 (56%)
Frame = +3
Query: 183 GFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLNFPKEYPLRPPRMKFVTEIWHPNI 362
G SA +DN I+ W+ I G DT++EG ++ L F +YP + P++KF T +HPN+
Sbjct: 55 GISAFPEEDN-IFCWKGTITGSKDTVFEGTEYRLSLTFSNDYPFKSPKVKFETCCFHPNV 113
Query: 363 DKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETILISVISMLADPNDESPANVDAAK 542
D G++C+ IL ++W + V TIL+S+ S+L +PN SP N AA+
Sbjct: 114 DLYGNICLDIL-------------QDKWSSAYDVRTILLSIQSLLGEPNISSPLNNQAAQ 160
Query: 543 EWRERYSEFKKKVAR 587
W + E++K V +
Sbjct: 161 LWSNQ-EEYRKMVEK 174
>At5g41700.3 68418.m05068 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 145
Score = 85.0 bits (201), Expect = 5e-17
Identities = 33/81 (40%), Positives = 55/81 (67%)
Frame = +3
Query: 159 ELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLNFPKEYPLRPPRMKFV 338
+L K+P SAG + + D++ W+ I+GP ++ Y GG F ++FP +YP +PP++ F
Sbjct: 12 DLQKDPPTSCSAGPVAE-DMFHWQATIMGPAESPYSGGVFLVTIHFPPDYPFKPPKVAFR 70
Query: 339 TEIWHPNIDKNGDVCISILHE 401
T+++HPNI+ NG +C+ IL E
Sbjct: 71 TKVFHPNINSNGSICLDILKE 91
>At3g13550.1 68416.m01703 ubiquitin-conjugating enzyme (COP10)
identical to ubiquitin-conjugating enzyme COP10
[Arabidopsis thaliana] GI:20065779; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 182
Score = 85.0 bits (201), Expect = 5e-17
Identities = 51/143 (35%), Positives = 74/143 (51%), Gaps = 3/143 (2%)
Frame = +3
Query: 159 ELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLNFPKEYPLRPPRMKFV 338
ELN +P SAG DN +Y W IIGP T YEGG F + FP +YP +PP++ F
Sbjct: 47 ELNIDPPPDCSAGPKGDN-LYHWIATIIGPSGTPYEGGIFFLDIIFPSDYPFKPPKLVFK 105
Query: 339 TEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETILISVISMLADPNDES 518
T I+H N+D GD+ ++IL + W P T+ +L ++ S+ P S
Sbjct: 106 TRIYHCNVDTAGDLSVNILR-------------DSWSPALTITKVLQAIRSIFLKPEPYS 152
Query: 519 PANVDAAKEW---RERYSEFKKK 578
PA A+ + RE++ E K+
Sbjct: 153 PALPVIARLYLTDREKHDEVAKE 175
>At1g78870.1 68414.m09193 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 112
Score = 83.8 bits (198), Expect = 1e-16
Identities = 40/86 (46%), Positives = 55/86 (63%)
Frame = +3
Query: 162 LNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLNFPKEYPLRPPRMKFVT 341
L P G SA +DN Y + V+I+GP + YEGG FK L P+EYP+ P+++F+T
Sbjct: 17 LLSEPAPGISASPSEDNMRY-FNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLT 75
Query: 342 EIWHPNIDKNGDVCISILHEPGDDKW 419
+I+HPNIDK G +C+ IL DKW
Sbjct: 76 KIYHPNIDKLGRICLDIL----KDKW 97
>At3g57870.1 68416.m06451 ubiquitin-conjugating enzyme, putative
strong similarity to SP|P50550 Ubiquitin-like protein
SUMO-1 conjugating enzyme (EC 6.3.2.19) (SUMO- 1-protein
ligase) (Ubiquitin carrier protein)
(Ubiquitin-conjugating enzyme UbcE2A) {Xenopus laevis};
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 160
Score = 80.2 bits (189), Expect = 1e-15
Identities = 43/119 (36%), Positives = 64/119 (53%)
Frame = +3
Query: 225 WEVLIIGPPDTLYEGGFFKAHLNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEP 404
W I G T +EGGFF ++F ++YP +PP+ KF +HPN+ +G VC+SIL+E
Sbjct: 42 WHCTIPGKAGTDWEGGFFPLTMHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNE- 100
Query: 405 GDDKWGYEKASERWLPVHTVETILISVISMLADPNDESPANVDAAKEWRERYSEFKKKV 581
+G W P TV+ IL+ + +L PN PA D + + E+KK+V
Sbjct: 101 ---DYG-------WRPAITVKQILVGIQDLLDTPNPADPAQTDGYHLFCQDPVEYKKRV 149
>At3g24515.1 68416.m03077 ubiquitin-conjugating enzyme, putative
similar to Ubiquitin-conjugating enzyme E2
(Ubiquitin-protein ligase) (Ubiquitin carrier protein)
from {Xenopus laevis} SP|P51669, {Schizosaccharomyces
pombe} SP|P46595, {Caenorhabditis elegans} SP|P35129;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 409
Score = 79.8 bits (188), Expect = 2e-15
Identities = 38/121 (31%), Positives = 60/121 (49%)
Frame = +3
Query: 237 IIGPPDTLYEGGFFKAHLNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDK 416
I GP DT+Y G F + P+ YP +PP + F T I+HPNID +G +C+ IL+ P
Sbjct: 51 IEGPEDTVYANGIFNLKIQIPERYPFQPPIVSFATPIYHPNIDNSGRICLDILNLP---- 106
Query: 417 WGYEKASERWLPVHTVETILISVISMLADPNDESPANVDAAKEWRERYSEFKKKVARCVR 596
W P + T+L S+ +L++PN + + ++E++ F K
Sbjct: 107 -----PKGAWQPSLNISTVLTSMRLLLSEPNPDDGLMCEVSREYKYNRQTFDYKAREMTE 161
Query: 597 K 599
K
Sbjct: 162 K 162
>At5g50870.1 68418.m06304 ubiquitin-conjugating enzyme, putative
strong similarity to ubiquitin conjugating enzyme
[Lycopersicon esculentum] GI:886679; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 192
Score = 79.4 bits (187), Expect = 2e-15
Identities = 38/112 (33%), Positives = 63/112 (56%), Gaps = 1/112 (0%)
Frame = +3
Query: 237 IIGPPDTLYEGGFFKAHLNFPKEYPLRPPRMKFVTEIWHPNI-DKNGDVCISILHEPGDD 413
I GP T YEGG F+ + P YP PP+M+F T++WHPNI ++G +C+ IL
Sbjct: 39 IPGPIGTPYEGGTFQIDITMPDGYPFEPPKMQFSTKVWHPNISSQSGAICLDIL------ 92
Query: 414 KWGYEKASERWLPVHTVETILISVISMLADPNDESPANVDAAKEWRERYSEF 569
++W P T++T L+S+ ++L+ P + P + A+++ + Y F
Sbjct: 93 -------KDQWSPALTLKTALVSIQALLSAPEPKDPQDAVVAEQYMKNYQVF 137
>At2g32790.1 68415.m04014 ubiquitin-conjugating enzyme, putative
similar to ubiquitin conjugating enzyme from [Oryza
sativa] GI:1373001, {Arabidopsis thaliana} SP|P35134,
SP|P35131; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 177
Score = 71.7 bits (168), Expect = 5e-13
Identities = 38/125 (30%), Positives = 68/125 (54%)
Frame = +3
Query: 213 DIYKWEVLIIGPPDTLYEGGFFKAHLNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISI 392
+I++WE + GP YE G F ++ P +YP PP++ F T+I+HPNI + G++ + I
Sbjct: 58 NIFRWEATVNGPVGCPYEKGVFTVSVHIPPKYPYEPPKITFKTKIFHPNISEIGEIFVDI 117
Query: 393 LHEPGDDKWGYEKASERWLPVHTVETILISVISMLADPNDESPANVDAAKEWRERYSEFK 572
L RW T+ +L+S+ S+L++P + + AA+ +++ +
Sbjct: 118 L-------------GSRWSSALTINLVLLSICSILSNPVEPLLVSNHAARLYQKDRKAY- 163
Query: 573 KKVAR 587
+KVAR
Sbjct: 164 EKVAR 168
>At1g45050.1 68414.m05165 ubiquitin-conjugating enzyme 15 (UBC15)
E2; identical to ubiquitin-conjugating enzyme 15
GI:2801442 from [Arabidopsis thaliana]
Length = 161
Score = 70.9 bits (166), Expect = 8e-13
Identities = 41/127 (32%), Positives = 66/127 (51%), Gaps = 2/127 (1%)
Frame = +3
Query: 159 ELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLNFPKEYPLRPPRMKFV 338
E NP GF + D+ + KW + + G P TLY ++ + FP+ YP+ P++ FV
Sbjct: 26 EWQLNPPTGFRHKVTDN--LQKWTIDVTGAPGTLYANETYQLQVEFPEHYPMEAPQVVFV 83
Query: 339 TEI-WHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETILISVISML-ADPND 512
+ HP+I NG +C+ IL+ + W P TV ++ IS++SML + P
Sbjct: 84 SPAPSHPHIYSNGHICLDILY-------------DSWSPAMTVNSVCISILSMLSSSPAK 130
Query: 513 ESPANVD 533
+ PA+ D
Sbjct: 131 QRPADND 137
>At2g18600.1 68415.m02166 RUB1-conjugating enzyme, putative strong
similarity to gi:6635457 RUB1 conjugating enzyme
[Arabidopsis thaliana]; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 185
Score = 70.1 bits (164), Expect = 1e-12
Identities = 41/132 (31%), Positives = 62/132 (46%)
Frame = +3
Query: 210 NDIYKWEVLIIGPPDTLYEGGFFKAHLNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCIS 389
ND+ +EV I P + Y G F YP P++K T+++HPNID G+VC++
Sbjct: 58 NDLMNFEVTI-KPDEGYYLSGNFVFSFQVSNMYPHEAPKVKCKTKVYHPNIDLEGNVCLN 116
Query: 390 ILHEPGDDKWGYEKASERWLPVHTVETILISVISMLADPNDESPANVDAAKEWRERYSEF 569
IL E W PV + T++ + + +PN E P N +AA R+ F
Sbjct: 117 ILRED-------------WKPVLNINTVIYGLFHLFTEPNYEDPLNHEAAAVLRDNPKTF 163
Query: 570 KKKVARCVRKSQ 605
+ V R + Q
Sbjct: 164 EYNVRRAMMGGQ 175
>At5g42990.1 68418.m05243 ubiquitin-conjugating enzyme 18 (UBC18)
E2; identical to gi:2801448
Length = 161
Score = 69.3 bits (162), Expect = 2e-12
Identities = 40/127 (31%), Positives = 63/127 (49%), Gaps = 2/127 (1%)
Frame = +3
Query: 159 ELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLNFPKEYPLRPPRMKFV 338
E NP GF + D+ + KW + + G P TLY + + FP+ YP+ P++ FV
Sbjct: 26 EWQVNPPTGFKHRVTDN--LQKWVIEVTGAPGTLYANETYNLQVEFPQHYPMEAPQVIFV 83
Query: 339 TEI-WHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETILISVISML-ADPND 512
HP+I NG +C+ IL+ + W P TV ++ IS++SML + P
Sbjct: 84 PPAPLHPHIYSNGHICLDILY-------------DSWSPAMTVSSVCISILSMLSSSPEK 130
Query: 513 ESPANVD 533
+ P + D
Sbjct: 131 QRPTDND 137
>At5g05080.1 68418.m00539 ubiquitin-conjugating enzyme, putative
similar to SP|Q16763 Ubiquitin-conjugating enzyme E2-24
kDa (EC 6.3.2.19) (Ubiquitin- protein ligase) (Ubiquitin
carrier protein) {Homo sapiens}; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 251
Score = 69.3 bits (162), Expect = 2e-12
Identities = 41/138 (29%), Positives = 68/138 (49%)
Frame = +3
Query: 162 LNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLNFPKEYPLRPPRMKFVT 341
L+++P +G +++D D + I GP T YE G F+ L ++P PP+ F+T
Sbjct: 22 LDESPPDGIKV-VVNDEDFSQICADIEGPVGTPYENGLFRMKLALSHDFPHSPPKGYFMT 80
Query: 342 EIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETILISVISMLADPNDESP 521
+I+HPN+ NG++C++ L + W P + +L V +L +P ES
Sbjct: 81 KIFHPNVASNGEICVNTL-------------KKDWNPSLGLRHVLSVVRCLLIEPFPESA 127
Query: 522 ANVDAAKEWRERYSEFKK 575
N A K E Y E+ +
Sbjct: 128 LNEQAGKMLLENYDEYAR 145
>At1g75440.1 68414.m08763 ubiquitin-conjugating enzyme 16 (UBC16)
E2; identical to gi:2801444, GB:AAC39325 from
[Arabidopsis thaliana] (Plant Mol. Biol. 23 (2), 387-396
(1993))
Length = 161
Score = 68.1 bits (159), Expect = 6e-12
Identities = 37/120 (30%), Positives = 63/120 (52%), Gaps = 1/120 (0%)
Frame = +3
Query: 159 ELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLNFPKEYPLRPPRMKFV 338
E NP GF + D+ + +W + +IG P TLY ++ ++FP+ YP+ P++ F+
Sbjct: 26 EWQMNPPTGFKHKVTDN--LQRWIIEVIGAPGTLYANDTYQLQVDFPEHYPMESPQVIFL 83
Query: 339 TEI-WHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETILISVISMLADPNDE 515
HP+I NG +C+ IL+ + W P TV +I IS++SML+ ++
Sbjct: 84 HPAPLHPHIYSNGHICLDILY-------------DSWSPAMTVSSICISILSMLSSSTEK 130
>At1g63800.1 68414.m07220 ubiquitin-conjugating enzyme 5 (UBC5) E2;
identical to gi:431269, SP:P42749
Length = 185
Score = 66.9 bits (156), Expect = 1e-11
Identities = 30/99 (30%), Positives = 57/99 (57%), Gaps = 1/99 (1%)
Frame = +3
Query: 159 ELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLNFPKEYPLRPPRMKFV 338
+L K + + +I+D + ++ V GP D++YEGG +K + P YP + P + F+
Sbjct: 11 DLMKLMMSDYKVEMINDG-MQEFFVEFSGPKDSIYEGGVWKIRVELPDAYPYKSPSVGFI 69
Query: 339 TEIWHPNIDK-NGDVCISILHEPGDDKWGYEKASERWLP 452
T+I+HPN+D+ +G VC+ ++++ + E +LP
Sbjct: 70 TKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFETFLP 108
>At3g17000.1 68416.m02171 ubiquitin-conjugating enzyme, putative
similar to Non-Canonical UBiquitin Conjugating Enzyme 1
(NCUBE1) from [Gallus gallus] GI:7362937, [Mus musculus]
GI:7363050, [Homo sapiens] GI:7362973; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 309
Score = 65.3 bits (152), Expect = 4e-11
Identities = 37/131 (28%), Positives = 67/131 (51%)
Frame = +3
Query: 159 ELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLNFPKEYPLRPPRMKFV 338
E+ NP + F + +++N I++W+ I GP DT +EGG + + P +YP +PP +
Sbjct: 22 EMQANPSDDFMSLPLEEN-IFEWQFAIRGPGDTEFEGGIYHGRIQLPADYPFKPPSFMLL 80
Query: 339 TEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETILISVISMLADPNDES 518
T + + N +C+SI + Y E W P +V T L+++I+ + + +
Sbjct: 81 TP--NGRFETNTKICLSISN--------YH--PEHWQPSWSVRTALVALIAFMPTSPNGA 128
Query: 519 PANVDAAKEWR 551
+VD K+ R
Sbjct: 129 LGSVDYPKDER 139
>At2g46030.1 68415.m05726 ubiquitin-conjugating enzyme 6 (UBC6) E2;
identical to gi|431267, SP:P42750, PIR:S52661; contains
a ubiquitin-conjugating enzymes active site (PDOC00163)
Length = 183
Score = 65.3 bits (152), Expect = 4e-11
Identities = 37/132 (28%), Positives = 65/132 (49%), Gaps = 1/132 (0%)
Frame = +3
Query: 207 DNDIYKWEVLIIGPPDTLYEGGFFKAHLNFPKEYPLRPPRMKFVTEIWHPNIDK-NGDVC 383
++D+ + V GP D+LY+GG +K + P+ YP + P + FV +I+HPN+D+ +G VC
Sbjct: 26 NDDLQMFYVTFHGPTDSLYQGGVWKIKVELPEAYPYKSPSVGFVNKIYHPNVDESSGAVC 85
Query: 384 ISILHEPGDDKWGYEKASERWLPVHTVETILISVISMLADPNDESPANVDAAKEWRERYS 563
+ ++++ + E +LP +L PN P N +AA +
Sbjct: 86 LDVINQTWSPMFDLINVFESFLP------------QLLLYPNPSDPFNGEAASLLMRDRA 133
Query: 564 EFKKKVARCVRK 599
++ KV K
Sbjct: 134 AYELKVKEYCEK 145
>At5g41340.1 68418.m05024 ubiquitin-conjugating enzyme 4 (UBC4) E2;
identical to gi:431265, SP:P42748
Length = 187
Score = 64.5 bits (150), Expect = 7e-11
Identities = 25/71 (35%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Frame = +3
Query: 243 GPPDTLYEGGFFKAHLNFPKEYPLRPPRMKFVTEIWHPNIDK-NGDVCISILHEPGDDKW 419
GP D+LY+GG +K + P YP + P + F+T+I+HPN+D+ +G VC+ ++++ +
Sbjct: 38 GPKDSLYQGGVWKIRVELPDAYPYKSPSVGFITKIYHPNVDELSGSVCLDVINQTWSPMF 97
Query: 420 GYEKASERWLP 452
E +LP
Sbjct: 98 DLVNVFETFLP 108
>At4g36410.1 68417.m05173 ubiquitin-conjugating enzyme 17 (UBC17)
E2; identical to gi:2801446
Length = 161
Score = 57.2 bits (132), Expect = 1e-08
Identities = 32/115 (27%), Positives = 57/115 (49%), Gaps = 1/115 (0%)
Frame = +3
Query: 159 ELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLNFPKEYPLRPPRMKFV 338
E NP GF + D+ + +W + + G P TLY ++ + FP+ YP+ P++ F
Sbjct: 26 EWQTNPPSGFKHRVSDN--LQRWIIEVHGVPGTLYANETYQLQVEFPEHYPMEAPQVIFQ 83
Query: 339 TEI-WHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETILISVISMLA 500
HP+I NG +C+ +L+ + W P + +I +S++SML+
Sbjct: 84 HPAPLHPHIYSNGHICLDVLY-------------DSWSPAMRLSSICLSILSMLS 125
>At1g23260.1 68414.m02910 ubiquitin-conjugating enzyme family
protein similar to TRAF6-regulated IKK activator 1 beta
Uev1A [Homo sapiens] GI:10880969; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 158
Score = 52.4 bits (120), Expect = 3e-07
Identities = 26/55 (47%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
Frame = +3
Query: 189 SAGLIDDNDIY--KWEVLIIGPPDTLYEGGFFKAHLNFPKEYPLRPPRMKFVTEI 347
S G+ D +DIY W I+GPP+T YEG F+ L KEYP PP ++F T I
Sbjct: 33 SYGMDDADDIYMQSWTGTILGPPNTAYEGKIFQLKLFCGKEYPESPPTVRFQTRI 87
>At5g50430.1 68418.m06245 ubiquitin-conjugating enzyme, putative
similar to ubiquitin conjugating enzyme 6 from [Homo
sapiens] GI:14029267, [Mus musculus] GI:14029263;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 243
Score = 50.0 bits (114), Expect = 2e-06
Identities = 30/119 (25%), Positives = 57/119 (47%)
Frame = +3
Query: 210 NDIYKWEVLIIGPPDTLYEGGFFKAHLNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCIS 389
NDI +W ++ G T + GGF+ + FP EYP +PP + T + +C+S
Sbjct: 32 NDILEWHYVLEGSEGTPFAGGFYYGKIKFPPEYPYKPPGITMTTP--NGRFVTQKKICLS 89
Query: 390 ILHEPGDDKWGYEKASERWLPVHTVETILISVISMLADPNDESPANVDAAKEWRERYSE 566
+ + E W P+ +V +IL ++S + D N + +V+ + ++R ++
Sbjct: 90 M----------SDFHPESWNPMWSVSSILTGLLSFMMD-NSPTTGSVNTSVAEKQRLAK 137
>At1g17280.1 68414.m02105 ubiquitin-conjugating enzyme, putative
similar to ubiquitin conjugating enzyme 6 from [Homo
sapiens] GI:14029267, [Mus musculus] GI:14029263;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 237
Score = 48.4 bits (110), Expect = 5e-06
Identities = 28/98 (28%), Positives = 46/98 (46%)
Frame = +3
Query: 210 NDIYKWEVLIIGPPDTLYEGGFFKAHLNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCIS 389
NDI +W ++ G T + GGF+ + FP EYP +PP + T K +C+S
Sbjct: 32 NDILEWHYVLEGSEGTPFAGGFYYGKIKFPPEYPYKPPGITMTTPNGRFMTQKK--ICLS 89
Query: 390 ILHEPGDDKWGYEKASERWLPVHTVETILISVISMLAD 503
+ + E W P+ +V +IL ++S + D
Sbjct: 90 M----------SDFHPESWNPMWSVSSILTGLLSFMMD 117
>At2g36060.1 68415.m04427 ubiquitin-conjugating enzyme family
protein similar to DNA-binding protein CROC-1B [Homo
sapiens] GI:1066082; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 145
Score = 46.0 bits (104), Expect = 3e-05
Identities = 22/55 (40%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Frame = +3
Query: 189 SAGLIDDNDIY--KWEVLIIGPPDTLYEGGFFKAHLNFPKEYPLRPPRMKFVTEI 347
S G+ D +DIY W IIGP +T++EG ++ L K+YP +PP ++F + I
Sbjct: 34 SYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPTVRFHSRI 88
>At3g52560.1 68416.m05784 ubiquitin-conjugating enzyme family
protein similar to DNA-binding protein CROC-1B [Homo
sapiens] GI:1066082; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 146
Score = 45.6 bits (103), Expect = 3e-05
Identities = 21/55 (38%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Frame = +3
Query: 189 SAGLIDDNDIY--KWEVLIIGPPDTLYEGGFFKAHLNFPKEYPLRPPRMKFVTEI 347
S G+ D +DIY W IIGP +T++EG ++ L K+YP +PP ++F + +
Sbjct: 35 SYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPTVRFHSRV 89
>At1g53020.1 68414.m06002 ubiquitin-conjugating enzyme family
protein similar to ubiquitin-conjugating enzyme
GB:3319990 from [Mus musculus]; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 1163
Score = 45.6 bits (103), Expect = 3e-05
Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 3/91 (3%)
Frame = +3
Query: 234 LIIGPPDTLYEGGFFKAHLNFPKEYPLRPPRMKFVTE--IWHPNIDKNGDVCISILHEPG 407
+IIG T Y G F + FP YP PP++ + + +PN+ K G VC+S++
Sbjct: 640 VIIGAEGTPYHDGLFFFDIQFPDTYPSVPPKVHYHSGGLRINPNLYKCGKVCLSLI---- 695
Query: 408 DDKWGYEKASERWLPVH-TVETILISVISML 497
W +K E+WLP T+ +L+S+ +++
Sbjct: 696 -STWTGKK-REKWLPKESTMLQLLVSIQALI 724
Score = 44.4 bits (100), Expect = 8e-05
Identities = 33/107 (30%), Positives = 52/107 (48%), Gaps = 5/107 (4%)
Frame = +3
Query: 234 LIIGPPDTLYEGGFFKAHLNFPKEYPLRPPRMKFVTE--IWHPNIDKNGDVCISILHEPG 407
+IIG T Y G F + FP YP PP + + + +PN+ G VC+S+L
Sbjct: 306 VIIGAEGTPYHDGLFFFDIQFPDTYPSVPPNVHYHSGGLRINPNLYNCGKVCLSLL---- 361
Query: 408 DDKWGYEKASERWLP-VHTVETILISVISMLAD--PNDESPANVDAA 539
W A E+WLP T+ +L+S+ +++ + P P V +A
Sbjct: 362 -GTWA-GSAREKWLPNESTMLQLLVSIQALILNEKPYFNEPGYVQSA 406
Score = 32.7 bits (71), Expect = 0.26
Identities = 26/79 (32%), Positives = 37/79 (46%), Gaps = 7/79 (8%)
Frame = +3
Query: 234 LIIGPPDTLYEGGFFKAHLNFPKEYPLRPPRMKFVTE--IWHPNIDKNGDVCISI----L 395
+IIG T Y G F + FP YP PP + + + +PN+ G V +SI L
Sbjct: 952 VIIGAEGTPYHDGLFFFDIQFPDTYPSVPPNVYYHSGGLRINPNLYNCGKVLVSIQALVL 1011
Query: 396 HE-PGDDKWGYEKASERWL 449
+E P ++ GY WL
Sbjct: 1012 NEQPYFNEPGYGLIKGTWL 1030
>At1g70660.1 68414.m08146 ubiquitin-conjugating enzyme family
protein similar to TRAF6-regulated IKK activator 1 beta
Uev1A [Homo sapiens] GI:10880969; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 159
Score = 44.0 bits (99), Expect = 1e-04
Identities = 33/108 (30%), Positives = 49/108 (45%), Gaps = 2/108 (1%)
Frame = +3
Query: 189 SAGLIDDNDIY--KWEVLIIGPPDTLYEGGFFKAHLNFPKEYPLRPPRMKFVTEIWHPNI 362
S G+ D +DI W I+GP +T YEG F+ L K+YP PP ++F + I +
Sbjct: 33 SYGMDDADDILMQSWTGTILGPHNTAYEGKIFQLKLFCGKDYPESPPTVRFQSRINMACV 92
Query: 363 DKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETILISVISMLADP 506
+ V + H P W E E L + + ++ S LA P
Sbjct: 93 NPENGV-VDPSHFPMLSNWRREFTMEDLL-IQLKKEMMSSQNRKLAQP 138
>At2g36060.2 68415.m04428 ubiquitin-conjugating enzyme family
protein similar to DNA-binding protein CROC-1B [Homo
sapiens] GI:1066082; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 146
Score = 41.5 bits (93), Expect = 6e-04
Identities = 22/56 (39%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Frame = +3
Query: 189 SAGLIDDNDIY--KWEVLIIGPPD-TLYEGGFFKAHLNFPKEYPLRPPRMKFVTEI 347
S G+ D +DIY W IIGP + T++EG ++ L K+YP +PP ++F + I
Sbjct: 34 SYGMDDGDDIYMRSWTGTIIGPHNVTVHEGRIYQLKLFCDKDYPEKPPTVRFHSRI 89
>At2g16920.1 68415.m01949 ubiquitin-conjugating enzyme family protein
low similarity to ubiquitin-conjugating BIR-domain enzyme
APOLLON [Homo sapiens] GI:8489831, ubiquitin-conjugating
enzyme [Mus musculus] GI:3319990; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 1102
Score = 41.5 bits (93), Expect = 6e-04
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 5/73 (6%)
Frame = +3
Query: 234 LIIGPPDTLYEGGFFKAHLNFPKEYPLRPPRMKFVTEIW--HPNIDKNGDVCISILHE-- 401
+I+G T Y+ G F + P +YP PP + + W +PN+ + G VC+S+L+
Sbjct: 885 VIVGAFGTPYQDGLFFFDFHLPSDYPSVPPSAYYHSGGWRLNPNLYEEGKVCLSLLNTWT 944
Query: 402 -PGDDKWGYEKAS 437
G++ W + +S
Sbjct: 945 GRGNEVWDPKSSS 957
>At3g52560.2 68416.m05785 ubiquitin-conjugating enzyme family
protein similar to DNA-binding protein CROC-1B [Homo
sapiens] GI:1066082; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 147
Score = 41.1 bits (92), Expect = 7e-04
Identities = 21/56 (37%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Frame = +3
Query: 189 SAGLIDDNDIY--KWEVLIIGPPD-TLYEGGFFKAHLNFPKEYPLRPPRMKFVTEI 347
S G+ D +DIY W IIGP + T++EG ++ L K+YP +PP ++F + +
Sbjct: 35 SYGMDDGDDIYMRSWTGTIIGPHNVTVHEGRIYQLKLFCDKDYPEKPPTVRFHSRV 90
>At3g15355.1 68416.m01945 ubiquitin-conjugating enzyme-related
similar to ubiquitin-conjugating enzyme (GI:3319990)
[Mus musculus]; similar to Baculoviral IAP
repeat-containing protein 6 (Ubiquitin-conjugating
BIR-domain enzyme apollon) (Swiss-Prot:Q9NR09) [Homo
sapiens];
Length = 609
Score = 39.9 bits (89), Expect = 0.002
Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 3/91 (3%)
Frame = +3
Query: 234 LIIGPPDTLYEGGFFKAHLNFPKEYPLRPPRMKFVTE--IWHPNIDKNGDVCISILHEPG 407
+IIG T Y G F + FP YP PP + + + +PN+ G VC+S+L
Sbjct: 367 VIIGAQGTPYHDGLFFFDIFFPDTYPSTPPIVHYHSGGLRINPNLYNCGKVCLSLL---- 422
Query: 408 DDKWGYEKASERWLP-VHTVETILISVISML 497
W + E+W+P T+ +L+S+ ++
Sbjct: 423 -GTWSGNQ-REKWIPNTSTMLQVLVSIQGLI 451
>At2g33770.1 68415.m04141 ubiquitin-conjugating enzyme family
protein low similarity to ubiquitin-conjugating
BIR-domain enzyme APOLLON [Homo sapiens] GI:8489831,
ubiquitin-conjugating enzyme [Mus musculus] GI:3319990;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 907
Score = 39.5 bits (88), Expect = 0.002
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Frame = +3
Query: 237 IIGPPDTLYEGGFFKAHLNFPKEYPLRPPRMKFVT--EIWHPNIDKNGDVCISILH 398
++G P T Y G F + P +YP PP + + + +PN+ ++G VC+S+L+
Sbjct: 698 LVGAPGTPYHDGLFFFDIMLPPQYPHEPPMVHYHSGGMRLNPNLYESGRVCLSLLN 753
>At1g44000.1 68414.m05076 expressed protein
Length = 260
Score = 34.3 bits (75), Expect = 0.085
Identities = 11/38 (28%), Positives = 23/38 (60%)
Frame = -3
Query: 441 VLKLFHNPICHHLAREVLICRHHHFYQYLDAIFQSQIS 328
++ +H+P+ H RE+ RHHH +++ + + +IS
Sbjct: 5 IVPYYHHPVLSHPNREIFSHRHHHHHRFCNNLLNRRIS 42
>At4g10560.1 68417.m01729 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 703
Score = 31.9 bits (69), Expect = 0.45
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = -3
Query: 414 CHHLAREVLICRHHHFYQYLDAIFQSQISSGVVSKDI 304
C L R + I RHHH + + Q ++S GV K+I
Sbjct: 318 CIDLPRVIRISRHHHRISFTPSFDQERLSCGVCQKNI 354
>At1g79830.1 68414.m09326 expressed protein weak similarity to TATA
element modulatory factor (TMF) (Swiss-Prot:P82094)
[Homo sapiens]
Length = 927
Score = 30.7 bits (66), Expect = 1.0
Identities = 21/85 (24%), Positives = 39/85 (45%), Gaps = 1/85 (1%)
Frame = +3
Query: 357 NIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETILISVISMLADPNDESPANV-D 533
NI+KN D + + D + AS W P +++ V+S + + +DE P + D
Sbjct: 29 NIEKNFDNALGF--DDKSDSAAEDAASSMWPPAVDTKSLFDPVMSFMGNTSDEKPDTLED 86
Query: 534 AAKEWRERYSEFKKKVARCVRKSQE 608
+ + E K++ A V+ + E
Sbjct: 87 SVRTENPSQIEQKEEEAGSVKLATE 111
>At1g48490.1 68414.m05420 protein kinase, putative similar to
incomplete root hair elongation (IRE) [Arabidopsis
thaliana] gi|6729346|dbj|BAA89783
Length = 878
Score = 30.3 bits (65), Expect = 1.4
Identities = 25/97 (25%), Positives = 36/97 (37%), Gaps = 2/97 (2%)
Frame = +3
Query: 363 DKNGDVCISILHEPGDDK-WGYEKASERWLPVHTVETILISVISMLADPNDESPANVDAA 539
D G + L P K + E+ W+ V +S + ESPAN+D
Sbjct: 48 DGKGSSTANALKVPSTKKAYSQEQRGLNWIEGFFVRPAPLSSPYNETSKDSESPANIDKM 107
Query: 540 KEWRERYSEFKKKVAR-CVRKSQEDCF*EQKDI*KRI 647
W+ S K V V K Q D E + K++
Sbjct: 108 SSWKRLPSPASKGVQEAAVSKEQNDRKVEPPQVVKKL 144
>At2g20420.1 68415.m02383 succinyl-CoA ligase [GDP-forming]
beta-chain, mitochondrial, putative / succinyl-CoA
synthetase, beta chain, putative / SCS-beta, putative
identical to SP|O82662 Succinyl-CoA ligase [GDP-forming]
beta-chain, mitochondrial precursor (EC 6.2.1.4)
(Succinyl-CoA synthetase, beta chain) (SCS- beta)
{Arabidopsis thaliana}; similar to SP|O97580
Succinyl-CoA ligase [ADP-forming] beta-chain,
mitochondrial precursor (EC 6.2.1.5) {Sus scrofa};
contains Pfam profiles PF00549: CoA-ligase, PF02222:
ATP-grasp domain
Length = 421
Score = 29.9 bits (64), Expect = 1.8
Identities = 19/62 (30%), Positives = 30/62 (48%)
Frame = +1
Query: 418 GVMKKLQNDGYLCTQLRLY*SVSFQCSLIQMMRVPLMLMLQKNGENDIRNSKRKLPDVLG 597
G K+ + YLC +L L + F L + PL++ +K G I + K PD++
Sbjct: 121 GPQGKVVSKVYLCEKLSLVNEMYFSIILDRKSAGPLIIACKKGG-TSIEDLAEKFPDMII 179
Query: 598 KV 603
KV
Sbjct: 180 KV 181
>At3g23790.1 68416.m02990 AMP-binding protein, putative similar to
AMP-binding protein GB:CAA96521 from [Brassica napus]
(Plant Mol. Biol. (1997) 33 (5), 911-922); contains Pfam
AMP-binding enzyme domain PF00501; identical to cDNA
acyl-CoA synthetase-like protein GI:20799732
Length = 722
Score = 29.5 bits (63), Expect = 2.4
Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Frame = +3
Query: 276 FKAHLNFPKEYPLRPPRMKFVTEIWHPNIDKNGD--VCISILHEP 404
F L+ P+E L K V +IW +++K GD + H+P
Sbjct: 63 FLERLSLPREAALSSNEWKSVPDIWRSSVEKYGDRVAVVDPYHDP 107
>At2g33170.1 68415.m04064 leucine-rich repeat transmembrane protein
kinase, putative similar to receptor protein kinase
[Pinus sylvestris] gi|12054894|emb|CAC20842; contains
leucine rich repeat (LRR) domains, Pfam:PF00560;
contains protein kinase domain, Pfam:PF00069
Length = 1124
Score = 29.1 bits (62), Expect = 3.2
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = -1
Query: 584 GNFLFEFRISFSPFFCSINISGTLIIWISEH*NDTDQYSLNCVHR 450
G ++FEF+ F + TL++W SE N Q+ L +R
Sbjct: 2 GWWIFEFKKESKSMFVGVLFLLTLLVWTSESLNSDGQFLLELKNR 46
>At1g50750.1 68414.m05707 expressed protein
Length = 816
Score = 29.1 bits (62), Expect = 3.2
Identities = 15/60 (25%), Positives = 30/60 (50%)
Frame = +1
Query: 511 MRVPLMLMLQKNGENDIRNSKRKLPDVLGKVKKIASRSKRIFRKEYIYC*KRAIVTPANI 690
+ + L L K +D+RNS R + LGK+ ++ + + + + + + IV P+ I
Sbjct: 510 LSIAQFLRLNKKKYSDVRNSGRDASEPLGKISRVEADNNDLGTFQKLASIRDEIVPPSEI 569
>At5g22680.1 68418.m02650 hypothetical protein
Length = 235
Score = 28.3 bits (60), Expect = 5.6
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = -3
Query: 87 LTALFASNVNLCQIQIVNTLDLQFDFGKV 1
+T F+ + NL I+I N+LDL FDF ++
Sbjct: 1 MTFKFSCDQNLDWIKIKNSLDLDFDFVEI 29
>At2g02680.1 68415.m00207 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 649
Score = 28.3 bits (60), Expect = 5.6
Identities = 9/37 (24%), Positives = 21/37 (56%)
Frame = -3
Query: 414 CHHLAREVLICRHHHFYQYLDAIFQSQISSGVVSKDI 304
C ++ + + I RHHH + ++ + + S GV +++
Sbjct: 274 CIYIPQTIRISRHHHCISFTSSLLKGKWSCGVCRQEV 310
>At1g63080.1 68414.m07126 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 614
Score = 27.9 bits (59), Expect = 7.3
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = -2
Query: 556 RSLHSFAASTLAGLSSFGSASIEMTLISIVSTVCTGNHRSEA 431
RS SFA + L + G +TL S+++ C GN SEA
Sbjct: 113 RSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEA 154
>At5g05880.1 68418.m00647 UDP-glucoronosyl/UDP-glucosyl transferase
family protein contains Pfam profile: PF00201
UDP-glucoronosyl and UDP-glucosyl transferase
Length = 451
Score = 27.5 bits (58), Expect = 9.7
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = -1
Query: 275 ETSLV*CVWGTNNEDFPFVYII 210
ET L+ WG +N D PF++++
Sbjct: 279 ETELMEIAWGLSNSDQPFLWVV 300
>At5g03360.1 68418.m00289 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 1610
Score = 27.5 bits (58), Expect = 9.7
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = -3
Query: 414 CHHLAREVLICRHHHFYQYLDAIFQSQISSGVVSKDI 304
C L R + I RHHH + + + S GV K I
Sbjct: 318 CFSLPRVIRISRHHHRISFTHSFEKGDWSCGVCRKKI 354
>At2g02690.1 68415.m00208 hypothetical protein
Length = 623
Score = 27.5 bits (58), Expect = 9.7
Identities = 10/37 (27%), Positives = 20/37 (54%)
Frame = -3
Query: 414 CHHLAREVLICRHHHFYQYLDAIFQSQISSGVVSKDI 304
C H+ + + I RHHH + ++ + S GV +++
Sbjct: 278 CIHVPQTIRISRHHHRVSFTSSLPLEKWSCGVCRREV 314
>At1g52930.1 68414.m05985 brix domain-containing protein contains
Pfam domain, PF04427: Brix domain
Length = 320
Score = 27.5 bits (58), Expect = 9.7
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = -2
Query: 250 GGPIMRTSHLYISLSSIKPAEKPSTGFLFSSEIK-KDLKDTH 128
GGP + + LY+S + I+ EK + F+ +IK K K H
Sbjct: 260 GGPTLYENPLYVSPNQIRALEKRNKAGKFAKKIKAKTRKKMH 301
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,536,634
Number of Sequences: 28952
Number of extensions: 355624
Number of successful extensions: 1089
Number of sequences better than 10.0: 71
Number of HSP's better than 10.0 without gapping: 1015
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1049
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1604469728
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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