BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bmte10n02 (675 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 04_04_0675 + 27183826-27184443 33 0.21 11_07_0007 - 27262229-27262638,27263252-27263312 31 1.1 09_02_0274 + 6611555-6611615,6612229-6612638 31 1.1 08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336... 31 1.1 11_06_0221 - 21387365-21387652,21387892-21389952,21390360-21390395 30 1.5 08_02_1256 + 25645085-25645396 29 3.4 07_03_1156 - 24416835-24417461 29 4.5 07_01_0037 + 301864-302349 29 4.5 06_03_0219 - 18227559-18227858,18227864-18228340 29 4.5 04_04_0592 + 26477974-26479311 29 4.5 04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076 29 4.5 10_08_0198 + 15688142-15690427,15690524-15690607,15691232-156913... 28 5.9 04_04_1602 + 34712748-34713097,34715452-34715605,34715702-34716103 28 5.9 03_06_0188 + 32212297-32212746 28 5.9 03_01_0515 - 3864796-3865425 28 7.8 02_02_0543 + 11360514-11361350,11361434-11361559,11361648-113619... 28 7.8 >04_04_0675 + 27183826-27184443 Length = 205 Score = 33.1 bits (72), Expect = 0.21 Identities = 13/32 (40%), Positives = 20/32 (62%) Frame = +2 Query: 368 RSRERRPPPLVPSVTVVHGPRPSLPSALPPQP 463 RS+ RRP PL+ ++ ++ GP PS + P P Sbjct: 78 RSKRRRPCPLLDAIDLLDGPSPSASPSQSPSP 109 >11_07_0007 - 27262229-27262638,27263252-27263312 Length = 156 Score = 30.7 bits (66), Expect = 1.1 Identities = 15/30 (50%), Positives = 18/30 (60%) Frame = -1 Query: 462 GCGGKADGSDGLGPCTTVTEGTSGGGRRSL 373 G GG+ G G G + G+SGGGRRSL Sbjct: 110 GGGGRGGGLSGRGHGSGGAGGSSGGGRRSL 139 >09_02_0274 + 6611555-6611615,6612229-6612638 Length = 156 Score = 30.7 bits (66), Expect = 1.1 Identities = 15/30 (50%), Positives = 18/30 (60%) Frame = -1 Query: 462 GCGGKADGSDGLGPCTTVTEGTSGGGRRSL 373 G GG+ G G G + G+SGGGRRSL Sbjct: 110 GGGGRGGGLSGRGHGSGGAGGSSGGGRRSL 139 >08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560, 33643-34147,34250-34358,34436-34548,34619-34806, 35481-36129,36169-36691,36760-36911,37042-37141, 37301-37416 Length = 1530 Score = 30.7 bits (66), Expect = 1.1 Identities = 15/26 (57%), Positives = 16/26 (61%) Frame = +2 Query: 386 PPPLVPSVTVVHGPRPSLPSALPPQP 463 PPPL PS+ P P LPS PPQP Sbjct: 1172 PPPLSPSLPPPPPP-PPLPSGPPPQP 1196 >11_06_0221 - 21387365-21387652,21387892-21389952,21390360-21390395 Length = 794 Score = 30.3 bits (65), Expect = 1.5 Identities = 18/39 (46%), Positives = 21/39 (53%) Frame = +2 Query: 341 PSEHLAIVERSRERRPPPLVPSVTVVHGPRPSLPSALPP 457 PSE ++RS ER P P +T PRPSL LPP Sbjct: 17 PSERSMQLDRSPERATPLPSPDMTPPAAPRPSL--QLPP 53 >08_02_1256 + 25645085-25645396 Length = 103 Score = 29.1 bits (62), Expect = 3.4 Identities = 18/43 (41%), Positives = 20/43 (46%) Frame = +2 Query: 332 LIRPSEHLAIVERSRERRPPPLVPSVTVVHGPRPSLPSALPPQ 460 L R HLAI S ++ PPP P P PS P PPQ Sbjct: 44 LARTQAHLAIAVASSQQPPPPPPPP------PLPSPPPPPPPQ 80 >07_03_1156 - 24416835-24417461 Length = 208 Score = 28.7 bits (61), Expect = 4.5 Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 5/47 (10%) Frame = +2 Query: 341 PSEHLAIVERSRERRPP-PLVPSVTVVHGPRPSLPS----ALPPQPV 466 P H A+ E + PP P+VP + P P++P PP PV Sbjct: 77 PPPHPAVPELPKHEEPPHPVVPELPKPEVPHPAVPELPKHEEPPHPV 123 >07_01_0037 + 301864-302349 Length = 161 Score = 28.7 bits (61), Expect = 4.5 Identities = 13/30 (43%), Positives = 17/30 (56%) Frame = -1 Query: 465 TGCGGKADGSDGLGPCTTVTEGTSGGGRRS 376 +G GG ADG+ G G + G GGG R+ Sbjct: 15 SGAGGGADGNAGGGVTSAGAAGGGGGGTRA 44 >06_03_0219 - 18227559-18227858,18227864-18228340 Length = 258 Score = 28.7 bits (61), Expect = 4.5 Identities = 17/40 (42%), Positives = 20/40 (50%), Gaps = 2/40 (5%) Frame = +2 Query: 350 HLAIVERSRER-RPPPLVPSVTVVHGPR-PSLPSALPPQP 463 HL + S R RPPP + + V P PS P A PP P Sbjct: 63 HLPVALLSLPRCRPPPAACAASTVRRPAAPSPPPASPPPP 102 >04_04_0592 + 26477974-26479311 Length = 445 Score = 28.7 bits (61), Expect = 4.5 Identities = 11/24 (45%), Positives = 12/24 (50%) Frame = +2 Query: 386 PPPLVPSVTVVHGPRPSLPSALPP 457 PPP P+ T P P LP PP Sbjct: 86 PPPPTPTTTTTPTPTPPLPPPAPP 109 >04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076 Length = 906 Score = 28.7 bits (61), Expect = 4.5 Identities = 13/24 (54%), Positives = 13/24 (54%) Frame = +2 Query: 386 PPPLVPSVTVVHGPRPSLPSALPP 457 PPPL PS HG P P LPP Sbjct: 287 PPPLPPSHHHHHGHHPPPPHPLPP 310 >10_08_0198 + 15688142-15690427,15690524-15690607,15691232-15691336, 15691420-15691528,15693037-15693188,15693278-15693583 Length = 1013 Score = 28.3 bits (60), Expect = 5.9 Identities = 11/23 (47%), Positives = 14/23 (60%) Frame = +3 Query: 282 LAPTRTRRPSACRPPRGSSGRPN 350 ++PT + P RP RG GRPN Sbjct: 479 ISPTPQQGPKGSRPSRGLRGRPN 501 >04_04_1602 + 34712748-34713097,34715452-34715605,34715702-34716103 Length = 301 Score = 28.3 bits (60), Expect = 5.9 Identities = 12/33 (36%), Positives = 21/33 (63%) Frame = +2 Query: 353 LAIVERSRERRPPPLVPSVTVVHGPRPSLPSAL 451 +A +E+ R ++ PS+TV+ GP+P P+ L Sbjct: 197 IATIEK-RGKKDKDKKPSITVIQGPKPGKPTDL 228 >03_06_0188 + 32212297-32212746 Length = 149 Score = 28.3 bits (60), Expect = 5.9 Identities = 11/24 (45%), Positives = 14/24 (58%) Frame = +2 Query: 392 PLVPSVTVVHGPRPSLPSALPPQP 463 P S TV P+P +PS +PP P Sbjct: 126 PPASSTTVQEDPQPPMPSVVPPVP 149 >03_01_0515 - 3864796-3865425 Length = 209 Score = 27.9 bits (59), Expect = 7.8 Identities = 12/29 (41%), Positives = 13/29 (44%) Frame = +2 Query: 377 ERRPPPLVPSVTVVHGPRPSLPSALPPQP 463 E PPPL P +V P P L P P Sbjct: 45 EASPPPLAPPPSVTSSPPPPAAGPLMPPP 73 >02_02_0543 + 11360514-11361350,11361434-11361559,11361648-11361976, 11362078-11362861 Length = 691 Score = 27.9 bits (59), Expect = 7.8 Identities = 11/25 (44%), Positives = 14/25 (56%) Frame = +2 Query: 380 RRPPPLVPSVTVVHGPRPSLPSALP 454 RRPPPL P++ + P P P P Sbjct: 24 RRPPPLPPAIIIHKDPPPPPPPRQP 48 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 13,469,668 Number of Sequences: 37544 Number of extensions: 225248 Number of successful extensions: 1484 Number of sequences better than 10.0: 16 Number of HSP's better than 10.0 without gapping: 1268 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1467 length of database: 14,793,348 effective HSP length: 79 effective length of database: 11,827,372 effective search space used: 1714968940 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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