Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10n02
         (675 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X90569-1|CAA62189.1| 7962|Homo sapiens elastic titin protein.          31   3.7  
AJ277892-2|CAD12456.1|30017|Homo sapiens Titin protein.                31   3.7  
BC150275-1|AAI50276.1| 1642|Homo sapiens neurexin 2 protein.           31   4.9  
AF321609-1|AAT09768.1|  834|Homo sapiens titin protein.                31   4.9  
AC044790-1|AAK68154.1| 1712|Homo sapiens NRXN2 protein.                31   4.9  
AB177862-1|BAD66840.1| 1434|Homo sapiens KIAA0921 splice variant...    31   4.9  
AB035266-1|BAA94075.1| 1712|Homo sapiens neurexin II protein.          31   4.9  
AB023138-1|BAA76765.2| 1658|Homo sapiens KIAA0921 protein protein.     31   4.9  
L21990-1|AAA60301.1|  464|Homo sapiens spiceosomal protein protein.    30   6.5  
BC015804-1|AAH15804.1|  481|Homo sapiens SF3A2 protein protein.        30   6.5  
BC009903-1|AAH09903.1|  464|Homo sapiens splicing factor 3a, sub...    30   6.5  
BC004434-1|AAH04434.1|  464|Homo sapiens splicing factor 3a, sub...    30   6.5  
BC001463-1|AAH01463.2|  137|Homo sapiens SCOTIN protein protein.       30   6.5  
AK075441-1|BAC11623.1|  240|Homo sapiens protein ( Homo sapiens ...    30   6.5  
AK056328-1|BAB71152.1|  209|Homo sapiens protein ( Homo sapiens ...    30   6.5  
AF520698-1|AAM74232.1|  240|Homo sapiens scotin protein.               30   6.5  
AC005263-1|AAC25613.1|  464|Homo sapiens SP62_HUMAN protein.           30   6.5  
AB097007-1|BAC77360.1|  137|Homo sapiens putative NFkB activatin...    30   6.5  

>X90569-1|CAA62189.1| 7962|Homo sapiens elastic titin protein.
          Length = 7962

 Score = 31.1 bits (67), Expect = 3.7
 Identities = 13/41 (31%), Positives = 20/41 (48%)
 Frame = +2

Query: 341  PSEHLAIVERSRERRPPPLVPSVTVVHGPRPSLPSALPPQP 463
            P + + +    +   PP  VP V  V  P   +P A+PP+P
Sbjct: 7305 PEKKVPVPPPKKPEVPPTKVPEVPKVAVPEKKVPEAIPPKP 7345


>AJ277892-2|CAD12456.1|30017|Homo sapiens Titin protein.
          Length = 30000

 Score = 31.1 bits (67), Expect = 3.7
 Identities = 13/41 (31%), Positives = 20/41 (48%)
 Frame = +2

Query: 341   PSEHLAIVERSRERRPPPLVPSVTVVHGPRPSLPSALPPQP 463
             P + + +    +   PP  VP V  V  P   +P A+PP+P
Sbjct: 11545 PEKKVPVPPPKKPEVPPTKVPEVPKVAVPEKKVPEAIPPKP 11585


>BC150275-1|AAI50276.1| 1642|Homo sapiens neurexin 2 protein.
          Length = 1642

 Score = 30.7 bits (66), Expect = 4.9
 Identities = 16/28 (57%), Positives = 17/28 (60%)
 Frame = +2

Query: 380  RRPPPLVPSVTVVHGPRPSLPSALPPQP 463
            RRPPPL P VT   G  P LP+A P  P
Sbjct: 1521 RRPPPLRPGVTSAPG-FPHLPTANPTGP 1547


>AF321609-1|AAT09768.1|  834|Homo sapiens titin protein.
          Length = 834

 Score = 30.7 bits (66), Expect = 4.9
 Identities = 13/41 (31%), Positives = 19/41 (46%)
 Frame = +2

Query: 341 PSEHLAIVERSRERRPPPLVPSVTVVHGPRPSLPSALPPQP 463
           P + + +    +   PP  VP V     P   LP A+PP+P
Sbjct: 461 PEKKVPVPPPKKPEVPPTKVPEVPKAAVPEKKLPEAIPPKP 501


>AC044790-1|AAK68154.1| 1712|Homo sapiens NRXN2 protein.
          Length = 1712

 Score = 30.7 bits (66), Expect = 4.9
 Identities = 16/28 (57%), Positives = 17/28 (60%)
 Frame = +2

Query: 380  RRPPPLVPSVTVVHGPRPSLPSALPPQP 463
            RRPPPL P VT   G  P LP+A P  P
Sbjct: 1591 RRPPPLRPGVTSAPG-FPHLPTANPTGP 1617


>AB177862-1|BAD66840.1| 1434|Homo sapiens KIAA0921 splice variant 1
            protein.
          Length = 1434

 Score = 30.7 bits (66), Expect = 4.9
 Identities = 16/28 (57%), Positives = 17/28 (60%)
 Frame = +2

Query: 380  RRPPPLVPSVTVVHGPRPSLPSALPPQP 463
            RRPPPL P VT   G  P LP+A P  P
Sbjct: 1313 RRPPPLRPGVTSAPG-FPHLPTANPTGP 1339


>AB035266-1|BAA94075.1| 1712|Homo sapiens neurexin II protein.
          Length = 1712

 Score = 30.7 bits (66), Expect = 4.9
 Identities = 16/28 (57%), Positives = 17/28 (60%)
 Frame = +2

Query: 380  RRPPPLVPSVTVVHGPRPSLPSALPPQP 463
            RRPPPL P VT   G  P LP+A P  P
Sbjct: 1591 RRPPPLRPGVTSAPG-FPHLPTANPTGP 1617


>AB023138-1|BAA76765.2| 1658|Homo sapiens KIAA0921 protein protein.
          Length = 1658

 Score = 30.7 bits (66), Expect = 4.9
 Identities = 16/28 (57%), Positives = 17/28 (60%)
 Frame = +2

Query: 380  RRPPPLVPSVTVVHGPRPSLPSALPPQP 463
            RRPPPL P VT   G  P LP+A P  P
Sbjct: 1537 RRPPPLRPGVTSAPG-FPHLPTANPTGP 1563


>L21990-1|AAA60301.1|  464|Homo sapiens spiceosomal protein protein.
          Length = 464

 Score = 30.3 bits (65), Expect = 6.5
 Identities = 14/29 (48%), Positives = 18/29 (62%)
 Frame = +2

Query: 377 ERRPPPLVPSVTVVHGPRPSLPSALPPQP 463
           +R PPPL+  +     PRP LP +LPP P
Sbjct: 231 KRPPPPLMNGLP----PRPPLPESLPPPP 255


>BC015804-1|AAH15804.1|  481|Homo sapiens SF3A2 protein protein.
          Length = 481

 Score = 30.3 bits (65), Expect = 6.5
 Identities = 14/29 (48%), Positives = 18/29 (62%)
 Frame = +2

Query: 377 ERRPPPLVPSVTVVHGPRPSLPSALPPQP 463
           +R PPPL+  +     PRP LP +LPP P
Sbjct: 231 KRPPPPLMNGLP----PRPPLPESLPPPP 255


>BC009903-1|AAH09903.1|  464|Homo sapiens splicing factor 3a,
           subunit 2, 66kDa protein.
          Length = 464

 Score = 30.3 bits (65), Expect = 6.5
 Identities = 14/29 (48%), Positives = 18/29 (62%)
 Frame = +2

Query: 377 ERRPPPLVPSVTVVHGPRPSLPSALPPQP 463
           +R PPPL+  +     PRP LP +LPP P
Sbjct: 231 KRPPPPLMNGLP----PRPPLPESLPPPP 255


>BC004434-1|AAH04434.1|  464|Homo sapiens splicing factor 3a,
           subunit 2, 66kDa protein.
          Length = 464

 Score = 30.3 bits (65), Expect = 6.5
 Identities = 14/29 (48%), Positives = 18/29 (62%)
 Frame = +2

Query: 377 ERRPPPLVPSVTVVHGPRPSLPSALPPQP 463
           +R PPPL+  +     PRP LP +LPP P
Sbjct: 231 KRPPPPLMNGLP----PRPPLPESLPPPP 255


>BC001463-1|AAH01463.2|  137|Homo sapiens SCOTIN protein protein.
          Length = 137

 Score = 30.3 bits (65), Expect = 6.5
 Identities = 16/31 (51%), Positives = 17/31 (54%), Gaps = 3/31 (9%)
 Frame = +2

Query: 380 RRPPPLVP---SVTVVHGPRPSLPSALPPQP 463
           RRP P+V    S TVVH P P  PS  P  P
Sbjct: 37  RRPRPVVTTTTSTTVVHAPYPQPPSVPPSYP 67


>AK075441-1|BAC11623.1|  240|Homo sapiens protein ( Homo sapiens
           cDNA PSEC0133 fis, clone PLACE1004507. ).
          Length = 240

 Score = 30.3 bits (65), Expect = 6.5
 Identities = 16/31 (51%), Positives = 17/31 (54%), Gaps = 3/31 (9%)
 Frame = +2

Query: 380 RRPPPLVP---SVTVVHGPRPSLPSALPPQP 463
           RRP P+V    S TVVH P P  PS  P  P
Sbjct: 140 RRPRPVVTTTTSTTVVHAPYPQPPSVPPSYP 170


>AK056328-1|BAB71152.1|  209|Homo sapiens protein ( Homo sapiens
           cDNA FLJ31766 fis, clone NT2RI2007879, weakly similar to
           HOMEOBOX PROTEIN HOX-A4. ).
          Length = 209

 Score = 30.3 bits (65), Expect = 6.5
 Identities = 16/31 (51%), Positives = 17/31 (54%), Gaps = 3/31 (9%)
 Frame = +2

Query: 380 RRPPPLVP---SVTVVHGPRPSLPSALPPQP 463
           RRP P+V    S TVVH P P  PS  P  P
Sbjct: 109 RRPRPVVTTTTSTTVVHAPYPQPPSVPPSYP 139


>AF520698-1|AAM74232.1|  240|Homo sapiens scotin protein.
          Length = 240

 Score = 30.3 bits (65), Expect = 6.5
 Identities = 16/31 (51%), Positives = 17/31 (54%), Gaps = 3/31 (9%)
 Frame = +2

Query: 380 RRPPPLVP---SVTVVHGPRPSLPSALPPQP 463
           RRP P+V    S TVVH P P  PS  P  P
Sbjct: 140 RRPRPVVTTTTSTTVVHAPYPQPPSVPPSYP 170


>AC005263-1|AAC25613.1|  464|Homo sapiens SP62_HUMAN protein.
          Length = 464

 Score = 30.3 bits (65), Expect = 6.5
 Identities = 14/29 (48%), Positives = 18/29 (62%)
 Frame = +2

Query: 377 ERRPPPLVPSVTVVHGPRPSLPSALPPQP 463
           +R PPPL+  +     PRP LP +LPP P
Sbjct: 231 KRPPPPLMNGLP----PRPPLPESLPPPP 255


>AB097007-1|BAC77360.1|  137|Homo sapiens putative NFkB activating
           protein protein.
          Length = 137

 Score = 30.3 bits (65), Expect = 6.5
 Identities = 16/31 (51%), Positives = 17/31 (54%), Gaps = 3/31 (9%)
 Frame = +2

Query: 380 RRPPPLVP---SVTVVHGPRPSLPSALPPQP 463
           RRP P+V    S TVVH P P  PS  P  P
Sbjct: 37  RRPRPVVTTTTSTTVVHAPYPQPPSVPPSYP 67


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,727,652
Number of Sequences: 237096
Number of extensions: 1188591
Number of successful extensions: 5699
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 5003
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5681
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7615267504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)