Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10n01
         (741 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    23   2.0  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    23   2.0  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    23   2.6  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    22   4.5  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       22   6.0  

>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 3/37 (8%)
 Frame = -3

Query: 460 HLLCNNSLLSAINKY---SQDEDNNYSDDHNNGESNN 359
           H L  N     I+K    S D+D++  DD +N E+ N
Sbjct: 268 HTLSMNHKYEKIDKEEHESMDDDDDDDDDMSNSENQN 304


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +3

Query: 165 NSATESHIFIEYVIPILQQLKKWTRLE 245
           NSA E  IF        Q ++KW+R+E
Sbjct: 270 NSAIEGIIFFNLAKSWPQLIEKWSRVE 296


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 10/32 (31%), Positives = 19/32 (59%)
 Frame = +1

Query: 577 TIDYTLKKCVQFKIEWFACKTQRSLETNNRLV 672
           T+++ +KK +  +I   +C T+R +   N LV
Sbjct: 767 TLNHEIKKVIPGRITQKSCSTKRYVTPVNTLV 798


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 10/24 (41%), Positives = 11/24 (45%)
 Frame = -2

Query: 128 NYS*GGNLKLWHFNG*ISQHRTCR 57
           NY      KLW+FN  IS     R
Sbjct: 410 NYEIRHKFKLWNFNNQISDDNPAR 433


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/30 (30%), Positives = 20/30 (66%)
 Frame = -3

Query: 442 SLLSAINKYSQDEDNNYSDDHNNGESNNSC 353
           S +  + + ++ E+++ S+++NN E  NSC
Sbjct: 445 SNVEVVQEEAKKEESD-SNNNNNKEEGNSC 473


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,393
Number of Sequences: 336
Number of extensions: 3327
Number of successful extensions: 11
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19884055
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)