Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10n01
         (741 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U64848-14|AAB04890.1|  382|Caenorhabditis elegans Hypothetical p...    32   0.37 
Z81592-1|CAB04725.1|  695|Caenorhabditis elegans Hypothetical pr...    30   2.0  
Z81492-3|CAB04030.1|  382|Caenorhabditis elegans Hypothetical pr...    28   8.0  
Z81483-3|CAB03961.1|  152|Caenorhabditis elegans Hypothetical pr...    28   8.0  
AL031633-6|CAA21014.3|  225|Caenorhabditis elegans Hypothetical ...    28   8.0  

>U64848-14|AAB04890.1|  382|Caenorhabditis elegans Hypothetical
           protein C50E3.12 protein.
          Length = 382

 Score = 32.3 bits (70), Expect = 0.37
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = -3

Query: 424 NKYSQDEDNNYSDDHNNGESNNSCYRQR 341
           + Y  +ED+ Y+DDH  G SN    R R
Sbjct: 332 DNYEDEEDDEYADDHQEGPSNRGYKRPR 359


>Z81592-1|CAB04725.1|  695|Caenorhabditis elegans Hypothetical
           protein T16G1.1 protein.
          Length = 695

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
 Frame = -3

Query: 454 LCNNSLLSAINKYSQDEDNNYSDDHNNGESNNSC-YRQRG 338
           L + S+ +   K   DED++Y D   NG + N C Y +RG
Sbjct: 328 LGSTSMPNPNRKSKYDEDDDYEDGDGNGCNGNGCSYGRRG 367


>Z81492-3|CAB04030.1|  382|Caenorhabditis elegans Hypothetical
           protein E03H4.6 protein.
          Length = 382

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = -2

Query: 641 CVLHANHSILNCTHFFKV*SIVLRPVVDLCQSPPCYV 531
           CV++A  + + CT FF++  I L  VVD    P  Y+
Sbjct: 3   CVINAGFNKIFCTIFFQILLIFLLIVVDCLNFPNQYL 39


>Z81483-3|CAB03961.1|  152|Caenorhabditis elegans Hypothetical
           protein C43D7.5 protein.
          Length = 152

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
 Frame = -3

Query: 451 CNNSLLSAINKYSQDEDNNYSDDHNNGESNNSCYRQRGNFFCYHDL-LGNR 302
           CNN     +N Y ++++ N  +  N+  +N S + Q G   CY+ + + NR
Sbjct: 51  CNNQEEGDVNMYRRNDNCNNREATNSRSANYSIHNQ-GMINCYNGIAIDNR 100


>AL031633-6|CAA21014.3|  225|Caenorhabditis elegans Hypothetical
           protein Y39A1A.8 protein.
          Length = 225

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 11/37 (29%), Positives = 18/37 (48%)
 Frame = -1

Query: 537 LCAILTPSFSFRTLIRRGALHLLASPICFAITRCCLQ 427
           +C++  P F    ++R  +   L  P+C A    CLQ
Sbjct: 140 ICSVAAPLFDIGKVVRNKSSESLPLPLCVACFVVCLQ 176


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,643,362
Number of Sequences: 27780
Number of extensions: 314356
Number of successful extensions: 860
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 809
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 858
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1745954468
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)