Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte10m22
(647 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U28928-14|AAL16319.1| 197|Caenorhabditis elegans Hypothetical p... 83 1e-16
Z73896-4|CAA98057.2| 503|Caenorhabditis elegans Hypothetical pr... 33 0.13
U21323-5|AAA62550.1| 124|Caenorhabditis elegans Hypothetical pr... 33 0.13
AF040661-1|AAK82922.2| 508|Caenorhabditis elegans Hypothetical ... 29 2.1
Z67995-6|CAA91946.1| 2692|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z67737-7|CAA91543.1| 2692|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z78198-2|CAB01567.1| 296|Caenorhabditis elegans Hypothetical pr... 28 6.6
L16679-1|AAA28092.5| 2104|Caenorhabditis elegans Muscle position... 28 6.6
AL132876-1|CAB60842.2| 132|Caenorhabditis elegans Hypothetical ... 28 6.6
AL117206-11|CAB60453.3| 1237|Caenorhabditis elegans Hypothetical... 28 6.6
AF289202-1|AAK69172.1| 2104|Caenorhabditis elegans transmembrane... 28 6.6
Z74043-10|CAA98542.2| 653|Caenorhabditis elegans Hypothetical p... 27 8.7
Z68108-14|CAA92133.3| 2066|Caenorhabditis elegans Hypothetical p... 27 8.7
Z68108-13|CAF31493.1| 2048|Caenorhabditis elegans Hypothetical p... 27 8.7
Z68108-12|CAF31492.1| 2101|Caenorhabditis elegans Hypothetical p... 27 8.7
Z68108-11|CAF31491.1| 2134|Caenorhabditis elegans Hypothetical p... 27 8.7
Z68108-10|CAF31490.1| 1888|Caenorhabditis elegans Hypothetical p... 27 8.7
Z68108-9|CAF31489.1| 1927|Caenorhabditis elegans Hypothetical pr... 27 8.7
Z68108-8|CAF31488.1| 1509|Caenorhabditis elegans Hypothetical pr... 27 8.7
Z68108-7|CAF31487.1| 1692|Caenorhabditis elegans Hypothetical pr... 27 8.7
Z68108-5|CAD44152.2| 725|Caenorhabditis elegans Hypothetical pr... 27 8.7
AY390537-1|AAQ94949.1| 692|Caenorhabditis elegans SMA-9 class B... 27 8.7
AY389810-1|AAR28682.1| 781|Caenorhabditis elegans zinc finger t... 27 8.7
AY389809-1|AAR28681.1| 909|Caenorhabditis elegans zinc finger t... 27 8.7
>U28928-14|AAL16319.1| 197|Caenorhabditis elegans Hypothetical
protein C44B7.1 protein.
Length = 197
Score = 83.4 bits (197), Expect = 1e-16
Identities = 49/150 (32%), Positives = 83/150 (55%)
Frame = +3
Query: 198 KLMEEKDRIEHLIRGHYAVLASNNVGLKGSLVDELGYPRDDIDVYEVRHARHKIICLQND 377
+L++++D ++ I+ VL +NN + L+D GYP + IDVY VRHARH +ICL+ND
Sbjct: 9 ELLQQRDELDGKIKELMLVLETNNSTMDSPLLDAEGYPLNTIDVYAVRHARHDLICLRND 68
Query: 378 HKKVMQLIERGIAKVYEDLIDSPGIDSEEINSCLNGYPVFKKDETVNDPTFATISFVDKG 557
+ + I + +++ E+ PV + T N+P F IS V +
Sbjct: 69 RAALTEKIVVEMENENKEVSGQTATSEEK--------PVHR---TSNEP-FVKISSVVEL 116
Query: 558 SPAEEAGLRAHDELVQFGSVNYKNFKDVSQ 647
SPA+ G R D ++Q+G++++ NF D+ +
Sbjct: 117 SPADIGGFRKDDLIIQYGNLHHGNFNDMQE 146
>Z73896-4|CAA98057.2| 503|Caenorhabditis elegans Hypothetical
protein F09E8.6 protein.
Length = 503
Score = 33.5 bits (73), Expect = 0.13
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = -3
Query: 411 YLSRSVALLSCDHFVGKLSCDARVSLHKRLCHHEGILAHQL 289
Y+ R+VA C +VG+ + VSL C +GI+AH+L
Sbjct: 173 YVKRNVAF-GCSSYVGRAGGNQTVSLEVDKCFSKGIIAHEL 212
>U21323-5|AAA62550.1| 124|Caenorhabditis elegans Hypothetical
protein C45G9.7 protein.
Length = 124
Score = 33.5 bits (73), Expect = 0.13
Identities = 13/29 (44%), Positives = 21/29 (72%)
Frame = +3
Query: 537 ISFVDKGSPAEEAGLRAHDELVQFGSVNY 623
I+ V+ GSPA+ AGLR HD+++Q ++
Sbjct: 63 ITNVESGSPADVAGLRKHDKILQVNGADF 91
>AF040661-1|AAK82922.2| 508|Caenorhabditis elegans Hypothetical
protein W10G11.19 protein.
Length = 508
Score = 29.5 bits (63), Expect = 2.1
Identities = 15/43 (34%), Positives = 27/43 (62%), Gaps = 2/43 (4%)
Frame = +3
Query: 390 MQLIERGIAKVYEDL-IDS-PGIDSEEINSCLNGYPVFKKDET 512
++L ++ K+Y +L +DS P D+ E+ L + +F+KDET
Sbjct: 93 VELFQKFADKLYTNLALDSLPIFDAGELKKSLKNFEIFEKDET 135
>Z67995-6|CAA91946.1| 2692|Caenorhabditis elegans Hypothetical protein
T01H10.8 protein.
Length = 2692
Score = 28.3 bits (60), Expect = 5.0
Identities = 26/119 (21%), Positives = 50/119 (42%)
Frame = +3
Query: 174 PATREFVMKLMEEKDRIEHLIRGHYAVLASNNVGLKGSLVDELGYPRDDIDVYEVRHARH 353
P + + ++ + +IE R + A N + LG PR + V ++ R
Sbjct: 1820 PRNMKRINEICDLMGKIEENERVFSRLAAVKNNYHPRKITSTLG-PRGERMVTDLTDVRT 1878
Query: 354 KIICLQNDHKKVMQLIERGIAKVYEDLIDSPGIDSEEINSCLNGYPVFKKDETVNDPTF 530
K + + ++H K + + + LI P I + N+CL+G + +T +P F
Sbjct: 1879 KDMFVMHEHTKKISIFSEMFDALNFSLIRKPSIFATLRNACLHGILIMNGIQT--NPVF 1935
>Z67737-7|CAA91543.1| 2692|Caenorhabditis elegans Hypothetical protein
T01H10.8 protein.
Length = 2692
Score = 28.3 bits (60), Expect = 5.0
Identities = 26/119 (21%), Positives = 50/119 (42%)
Frame = +3
Query: 174 PATREFVMKLMEEKDRIEHLIRGHYAVLASNNVGLKGSLVDELGYPRDDIDVYEVRHARH 353
P + + ++ + +IE R + A N + LG PR + V ++ R
Sbjct: 1820 PRNMKRINEICDLMGKIEENERVFSRLAAVKNNYHPRKITSTLG-PRGERMVTDLTDVRT 1878
Query: 354 KIICLQNDHKKVMQLIERGIAKVYEDLIDSPGIDSEEINSCLNGYPVFKKDETVNDPTF 530
K + + ++H K + + + LI P I + N+CL+G + +T +P F
Sbjct: 1879 KDMFVMHEHTKKISIFSEMFDALNFSLIRKPSIFATLRNACLHGILIMNGIQT--NPVF 1935
>Z78198-2|CAB01567.1| 296|Caenorhabditis elegans Hypothetical
protein F55C5.2 protein.
Length = 296
Score = 27.9 bits (59), Expect = 6.6
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -2
Query: 100 KSIMLDGYNYCNCKFADLIRCIDFCFENALQ 8
++++L+ N N K L IDFC EN L+
Sbjct: 101 EAVVLNPVNGVNAKIPRLNEAIDFCVENGLK 131
>L16679-1|AAA28092.5| 2104|Caenorhabditis elegans Muscle positioning
protein 4 protein.
Length = 2104
Score = 27.9 bits (59), Expect = 6.6
Identities = 20/72 (27%), Positives = 31/72 (43%)
Frame = +3
Query: 366 LQNDHKKVMQLIERGIAKVYEDLIDSPGIDSEEINSCLNGYPVFKKDETVNDPTFATISF 545
L +DHK ++ E G+A+ Y+ + E+N N P +K + S
Sbjct: 1523 LNDDHKDLVSRFESGVAQSYDKTPLKGAFVTAEVNEIEN--PESRKKSWDTGILYNFTSH 1580
Query: 546 VDKGSPAEEAGL 581
KGS AE A +
Sbjct: 1581 FVKGSVAEPASV 1592
>AL132876-1|CAB60842.2| 132|Caenorhabditis elegans Hypothetical
protein Y105E8A.1 protein.
Length = 132
Score = 27.9 bits (59), Expect = 6.6
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +3
Query: 288 LVDELGYPRDDIDVYEVRHARHKIICLQNDHKK 386
++D LG P D ID+ + HA + +N KK
Sbjct: 27 ILDGLGIPFDSIDITKPEHAEQRRFMRENASKK 59
>AL117206-11|CAB60453.3| 1237|Caenorhabditis elegans Hypothetical
protein Y67A10A.3 protein.
Length = 1237
Score = 27.9 bits (59), Expect = 6.6
Identities = 10/41 (24%), Positives = 27/41 (65%), Gaps = 2/41 (4%)
Frame = +3
Query: 396 LIERGIAKVYE--DLIDSPGIDSEEINSCLNGYPVFKKDET 512
++ R +++VYE +++ + ++++N+ ++G PV+K T
Sbjct: 590 IVLRKMSEVYEKSEIVSAAASSADDVNNLISGVPVYKSSWT 630
>AF289202-1|AAK69172.1| 2104|Caenorhabditis elegans transmembrane
matrix receptor MUP-4 protein.
Length = 2104
Score = 27.9 bits (59), Expect = 6.6
Identities = 20/72 (27%), Positives = 31/72 (43%)
Frame = +3
Query: 366 LQNDHKKVMQLIERGIAKVYEDLIDSPGIDSEEINSCLNGYPVFKKDETVNDPTFATISF 545
L +DHK ++ E G+A+ Y+ + E+N N P +K + S
Sbjct: 1523 LNDDHKDLVSRFESGVAQSYDKTPLKGAFVTAEVNEIEN--PESRKKSWDTGILYNFTSH 1580
Query: 546 VDKGSPAEEAGL 581
KGS AE A +
Sbjct: 1581 FVKGSVAEPASV 1592
>Z74043-10|CAA98542.2| 653|Caenorhabditis elegans Hypothetical
protein T19B10.3 protein.
Length = 653
Score = 27.5 bits (58), Expect = 8.7
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +3
Query: 363 CLQNDHKKVMQLIERGIAKVYEDLIDSPGIDSE 461
CL+N+ ++ L+E K +E + D GI S+
Sbjct: 485 CLENEENRLFMLVENQGRKTFETINDRKGILSD 517
>Z68108-14|CAA92133.3| 2066|Caenorhabditis elegans Hypothetical
protein T05A10.1a protein.
Length = 2066
Score = 27.5 bits (58), Expect = 8.7
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +3
Query: 465 INSCLNGYPVFKKDETVNDPTFATISFVDKGSPAEEAGLRAHD 593
+ S +G P+ + + NDP + K + EAGL+AH+
Sbjct: 453 MGSLTSGQPLLRPIQAHNDPNYTPECIYCKLTFPNEAGLQAHE 495
>Z68108-13|CAF31493.1| 2048|Caenorhabditis elegans Hypothetical
protein T05A10.1f protein.
Length = 2048
Score = 27.5 bits (58), Expect = 8.7
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +3
Query: 465 INSCLNGYPVFKKDETVNDPTFATISFVDKGSPAEEAGLRAHD 593
+ S +G P+ + + NDP + K + EAGL+AH+
Sbjct: 521 MGSLTSGQPLLRPIQAHNDPNYTPECIYCKLTFPNEAGLQAHE 563
>Z68108-12|CAF31492.1| 2101|Caenorhabditis elegans Hypothetical
protein T05A10.1e protein.
Length = 2101
Score = 27.5 bits (58), Expect = 8.7
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +3
Query: 465 INSCLNGYPVFKKDETVNDPTFATISFVDKGSPAEEAGLRAHD 593
+ S +G P+ + + NDP + K + EAGL+AH+
Sbjct: 521 MGSLTSGQPLLRPIQAHNDPNYTPECIYCKLTFPNEAGLQAHE 563
>Z68108-11|CAF31491.1| 2134|Caenorhabditis elegans Hypothetical
protein T05A10.1d protein.
Length = 2134
Score = 27.5 bits (58), Expect = 8.7
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +3
Query: 465 INSCLNGYPVFKKDETVNDPTFATISFVDKGSPAEEAGLRAHD 593
+ S +G P+ + + NDP + K + EAGL+AH+
Sbjct: 521 MGSLTSGQPLLRPIQAHNDPNYTPECIYCKLTFPNEAGLQAHE 563
>Z68108-10|CAF31490.1| 1888|Caenorhabditis elegans Hypothetical
protein T05A10.1g protein.
Length = 1888
Score = 27.5 bits (58), Expect = 8.7
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +3
Query: 465 INSCLNGYPVFKKDETVNDPTFATISFVDKGSPAEEAGLRAHD 593
+ S +G P+ + + NDP + K + EAGL+AH+
Sbjct: 521 MGSLTSGQPLLRPIQAHNDPNYTPECIYCKLTFPNEAGLQAHE 563
>Z68108-9|CAF31489.1| 1927|Caenorhabditis elegans Hypothetical
protein T05A10.1i protein.
Length = 1927
Score = 27.5 bits (58), Expect = 8.7
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +3
Query: 465 INSCLNGYPVFKKDETVNDPTFATISFVDKGSPAEEAGLRAHD 593
+ S +G P+ + + NDP + K + EAGL+AH+
Sbjct: 521 MGSLTSGQPLLRPIQAHNDPNYTPECIYCKLTFPNEAGLQAHE 563
>Z68108-8|CAF31488.1| 1509|Caenorhabditis elegans Hypothetical
protein T05A10.1j protein.
Length = 1509
Score = 27.5 bits (58), Expect = 8.7
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +3
Query: 465 INSCLNGYPVFKKDETVNDPTFATISFVDKGSPAEEAGLRAHD 593
+ S +G P+ + + NDP + K + EAGL+AH+
Sbjct: 521 MGSLTSGQPLLRPIQAHNDPNYTPECIYCKLTFPNEAGLQAHE 563
>Z68108-7|CAF31487.1| 1692|Caenorhabditis elegans Hypothetical
protein T05A10.1c protein.
Length = 1692
Score = 27.5 bits (58), Expect = 8.7
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +3
Query: 465 INSCLNGYPVFKKDETVNDPTFATISFVDKGSPAEEAGLRAHD 593
+ S +G P+ + + NDP + K + EAGL+AH+
Sbjct: 79 MGSLTSGQPLLRPIQAHNDPNYTPECIYCKLTFPNEAGLQAHE 121
>Z68108-5|CAD44152.2| 725|Caenorhabditis elegans Hypothetical
protein T05A10.1b protein.
Length = 725
Score = 27.5 bits (58), Expect = 8.7
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +3
Query: 465 INSCLNGYPVFKKDETVNDPTFATISFVDKGSPAEEAGLRAHD 593
+ S +G P+ + + NDP + K + EAGL+AH+
Sbjct: 544 MGSLTSGQPLLRPIQAHNDPNYTPECIYCKLTFPNEAGLQAHE 586
>AY390537-1|AAQ94949.1| 692|Caenorhabditis elegans SMA-9 class B
protein.
Length = 692
Score = 27.5 bits (58), Expect = 8.7
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +3
Query: 465 INSCLNGYPVFKKDETVNDPTFATISFVDKGSPAEEAGLRAHD 593
+ S +G P+ + + NDP + K + EAGL+AH+
Sbjct: 544 MGSLTSGQPLLRPIQAHNDPNYTPECIYCKLTFPNEAGLQAHE 586
>AY389810-1|AAR28682.1| 781|Caenorhabditis elegans zinc finger
transcription factorSMA-9 protein.
Length = 781
Score = 27.5 bits (58), Expect = 8.7
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +3
Query: 465 INSCLNGYPVFKKDETVNDPTFATISFVDKGSPAEEAGLRAHD 593
+ S +G P+ + + NDP + K + EAGL+AH+
Sbjct: 101 MGSLTSGQPLLRPIQAHNDPNYTPERIYCKLTFPNEAGLQAHE 143
>AY389809-1|AAR28681.1| 909|Caenorhabditis elegans zinc finger
transcription factorSMA-9 protein.
Length = 909
Score = 27.5 bits (58), Expect = 8.7
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +3
Query: 465 INSCLNGYPVFKKDETVNDPTFATISFVDKGSPAEEAGLRAHD 593
+ S +G P+ + + NDP + K + EAGL+AH+
Sbjct: 453 MGSLTSGQPLLRPIQAHNDPNYTPECIYCKLTFPNEAGLQAHE 495
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,882,032
Number of Sequences: 27780
Number of extensions: 283431
Number of successful extensions: 817
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 787
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 816
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1434198608
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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