Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10m19
         (521 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A1SF09 Cluster: Binding-protein-dependent transport sys...    33   5.2  
UniRef50_Q0CA66 Cluster: Predicted protein; n=1; Aspergillus ter...    32   6.9  

>UniRef50_A1SF09 Cluster: Binding-protein-dependent transport
           systems inner membrane component precursor; n=1;
           Nocardioides sp. JS614|Rep: Binding-protein-dependent
           transport systems inner membrane component precursor -
           Nocardioides sp. (strain BAA-499 / JS614)
          Length = 284

 Score = 32.7 bits (71), Expect = 5.2
 Identities = 16/34 (47%), Positives = 21/34 (61%)
 Frame = -2

Query: 445 GYAYAINALRFERTDLSAKLFIYILPELGKLLAL 344
           GYA+A    RF RT L A L IY+LP +  ++ L
Sbjct: 100 GYAFARLRFRFRRTSLFAFLAIYMLPPIALVIPL 133


>UniRef50_Q0CA66 Cluster: Predicted protein; n=1; Aspergillus
           terreus NIH2624|Rep: Predicted protein - Aspergillus
           terreus (strain NIH 2624)
          Length = 406

 Score = 32.3 bits (70), Expect = 6.9
 Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
 Frame = -2

Query: 433 AINALRFERTDLSAKLFIYILPELGKL--LALCQSALKQLVNCNV-KYKVPI*FRTFKIS 263
           AI A +FER     ++++   PE   L  LA CQ+AL+ +  C++   K P+ FR    S
Sbjct: 161 AIGA-QFERAQQRERVYVIDEPEAATLSVLAQCQNALEDITTCSILSVKPPLAFRQITAS 219


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 397,259,447
Number of Sequences: 1657284
Number of extensions: 6708907
Number of successful extensions: 14046
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 13731
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14044
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32619212418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)