Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10m17
         (738 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    25   2.4  
CR954256-5|CAJ14146.1|  615|Anopheles gambiae predicted protein ...    24   4.3  
AJ439060-18|CAD27769.1|  257|Anopheles gambiae hypothetical prot...    24   4.3  
AY280613-1|AAQ21366.1|  257|Anopheles gambiae carbonic anhydrase...    23   9.8  

>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1222

 Score = 25.0 bits (52), Expect = 2.4
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = +1

Query: 520 LAKSIGISNFNTTQIDRILENGQIKPSVLQV 612
           L  S+G+   NT      L NG  +PSV+ V
Sbjct: 144 LVDSLGLEVLNTGTAPTFLGNGVARPSVVDV 174


>CR954256-5|CAJ14146.1|  615|Anopheles gambiae predicted protein
           protein.
          Length = 615

 Score = 24.2 bits (50), Expect = 4.3
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -2

Query: 134 PKAGIELPSFSEIFEALPP 78
           P A +E   F+ IF+ LPP
Sbjct: 315 PVASVEAVKFTHIFQILPP 333


>AJ439060-18|CAD27769.1|  257|Anopheles gambiae hypothetical protein
           protein.
          Length = 257

 Score = 24.2 bits (50), Expect = 4.3
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = -1

Query: 711 VEHRAERGKRHNNYTV 664
           V+HRA+R + +NN T+
Sbjct: 205 VQHRAQRNRTNNNNTI 220


>AY280613-1|AAQ21366.1|  257|Anopheles gambiae carbonic anhydrase
           alternate isoform protein.
          Length = 257

 Score = 23.0 bits (47), Expect = 9.8
 Identities = 16/75 (21%), Positives = 31/75 (41%), Gaps = 4/75 (5%)
 Frame = +1

Query: 421 IHNPVAFNPGFK----GFDIVDYLDTWKGMEEAKNLGLAKSIGISNFNTTQIDRILENGQ 588
           + +P+A N        G   +DY   W G+ +AK +    S  I+ F+       +  G 
Sbjct: 9   VQSPIALNQRSTVIRDGIQPLDYFGHWDGLGKAKMVNTGSSAMIT-FSDRPFRPFIVGGV 67

Query: 589 IKPSVLQVEVNLHLG 633
           +    +  +++ H G
Sbjct: 68  LGNKYIFEQLHFHWG 82


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 785,843
Number of Sequences: 2352
Number of extensions: 14688
Number of successful extensions: 54
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 54
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 75676146
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)