BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte10m16
(638 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF015905-1|ABM64216.1| 1255|Homo sapiens period 2 protein. 30 6.0
AF007190-1|AAC02268.1| 513|Homo sapiens intestinal mucin protein. 30 6.0
AC012485-1|AAX88976.1| 1255|Homo sapiens unknown protein. 30 6.0
AB002345-1|BAA20804.2| 1281|Homo sapiens KIAA0347 protein protein. 30 6.0
BC009433-1|AAH09433.1| 463|Homo sapiens ZNF331 protein protein. 30 8.0
BC009365-1|AAH09365.1| 308|Homo sapiens ZNF331 protein protein. 30 8.0
AK075226-1|BAC11485.1| 399|Homo sapiens protein ( Homo sapiens ... 30 8.0
AF272148-1|AAF78075.1| 463|Homo sapiens KRAB zinc finger protei... 30 8.0
AF251515-1|AAF70179.2| 463|Homo sapiens C2H2-like zinc finger p... 30 8.0
>EF015905-1|ABM64216.1| 1255|Homo sapiens period 2 protein.
Length = 1255
Score = 30.3 bits (65), Expect = 6.0
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +3
Query: 447 GTRAMEGTDRDIRAAVPVTRATNLDTTNTDPVSTGTPRPTLVIS 578
G GT RD + P+TR DT N+D +ST + L+++
Sbjct: 1019 GADCKPGTSRDQQPKAPLTRDEPSDTQNSDALSTSSGLLNLLLN 1062
>AF007190-1|AAC02268.1| 513|Homo sapiens intestinal mucin protein.
Length = 513
Score = 30.3 bits (65), Expect = 6.0
Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Frame = +3
Query: 381 VTMVVTKADIKAVIREASADFQGTRAMEGTDRDIRAAVPV--TRATNLDTTNTDPVST 548
+T +T D +R ++ T + I ++ PV T T TTNT+PVST
Sbjct: 385 ITSSITPTDTMTSMRTTTSWPTATNTLSPLTSSILSSTPVPSTEVTTSHTTNTNPVST 442
>AC012485-1|AAX88976.1| 1255|Homo sapiens unknown protein.
Length = 1255
Score = 30.3 bits (65), Expect = 6.0
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +3
Query: 447 GTRAMEGTDRDIRAAVPVTRATNLDTTNTDPVSTGTPRPTLVIS 578
G GT RD + P+TR DT N+D +ST + L+++
Sbjct: 1019 GADCKPGTSRDQQPKAPLTRDEPSDTQNSDALSTSSGLLNLLLN 1062
>AB002345-1|BAA20804.2| 1281|Homo sapiens KIAA0347 protein protein.
Length = 1281
Score = 30.3 bits (65), Expect = 6.0
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +3
Query: 447 GTRAMEGTDRDIRAAVPVTRATNLDTTNTDPVSTGTPRPTLVIS 578
G GT RD + P+TR DT N+D +ST + L+++
Sbjct: 1045 GADCKPGTSRDQQPKAPLTRDEPSDTQNSDALSTSSGLLNLLLN 1088
>BC009433-1|AAH09433.1| 463|Homo sapiens ZNF331 protein protein.
Length = 463
Score = 29.9 bits (64), Expect = 8.0
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -1
Query: 581 QRNYQRWSRGTGRNWICIGCIQ 516
+RN R S+ GRNWIC G ++
Sbjct: 69 KRNSDRRSKSLGRNWICEGTLE 90
>BC009365-1|AAH09365.1| 308|Homo sapiens ZNF331 protein protein.
Length = 308
Score = 29.9 bits (64), Expect = 8.0
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -1
Query: 581 QRNYQRWSRGTGRNWICIGCIQ 516
+RN R S+ GRNWIC G ++
Sbjct: 69 KRNSDRRSKSLGRNWICEGTLE 90
>AK075226-1|BAC11485.1| 399|Homo sapiens protein ( Homo sapiens
cDNA FLJ90745 fis, clone PLACE1011407, moderately
similar to ZINC FINGER PROTEIN 184. ).
Length = 399
Score = 29.9 bits (64), Expect = 8.0
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -1
Query: 581 QRNYQRWSRGTGRNWICIGCIQ 516
+RN R S+ GRNWIC G ++
Sbjct: 69 KRNSDRRSKSLGRNWICEGTLE 90
>AF272148-1|AAF78075.1| 463|Homo sapiens KRAB zinc finger protein
protein.
Length = 463
Score = 29.9 bits (64), Expect = 8.0
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -1
Query: 581 QRNYQRWSRGTGRNWICIGCIQ 516
+RN R S+ GRNWIC G ++
Sbjct: 69 KRNSDRRSKSLGRNWICEGTLE 90
>AF251515-1|AAF70179.2| 463|Homo sapiens C2H2-like zinc finger
protein protein.
Length = 463
Score = 29.9 bits (64), Expect = 8.0
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -1
Query: 581 QRNYQRWSRGTGRNWICIGCIQ 516
+RN R S+ GRNWIC G ++
Sbjct: 69 KRNSDRRSKSLGRNWICEGTLE 90
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 56,103,931
Number of Sequences: 237096
Number of extensions: 929192
Number of successful extensions: 2571
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2421
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2567
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7028963750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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