Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte10m16
(638 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF039050-14|AAC47928.1| 69|Caenorhabditis elegans Neuropeptide... 30 1.2
Z81528-4|CAB04281.1| 575|Caenorhabditis elegans Hypothetical pr... 29 3.7
U28941-5|AAM98026.2| 989|Caenorhabditis elegans Hypothetical pr... 29 3.7
AY314775-1|AAQ84882.1| 971|Caenorhabditis elegans methuselah-li... 29 3.7
AL031620-5|CAA20926.1| 277|Caenorhabditis elegans Hypothetical ... 28 4.9
Z68314-1|CAA92658.1| 102|Caenorhabditis elegans Hypothetical pr... 28 6.5
Z68006-7|CAA91995.2| 783|Caenorhabditis elegans Hypothetical pr... 28 6.5
AF497831-1|AAM18109.1| 783|Caenorhabditis elegans putative Na-H... 28 6.5
AF016448-12|AAB65959.1| 316|Caenorhabditis elegans Hypothetical... 28 6.5
Z48007-1|CAA88052.1| 1140|Caenorhabditis elegans Hypothetical pr... 27 8.6
U46753-7|AAA85763.2| 223|Caenorhabditis elegans Hypothetical pr... 27 8.6
>AF039050-14|AAC47928.1| 69|Caenorhabditis elegans
Neuropeptide-like protein protein30 protein.
Length = 69
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/34 (41%), Positives = 16/34 (47%)
Frame = +2
Query: 497 GYPGYKSGYNQYRSSFDRYPATNAGNFFGGYGDG 598
GY GY GY Y + Y G +GGYG G
Sbjct: 35 GYGGYGRGYGGYGRGYGGYGRGMWGRPYGGYGWG 68
>Z81528-4|CAB04281.1| 575|Caenorhabditis elegans Hypothetical
protein F35E2.5 protein.
Length = 575
Score = 28.7 bits (61), Expect = 3.7
Identities = 24/95 (25%), Positives = 36/95 (37%), Gaps = 4/95 (4%)
Frame = +3
Query: 282 ATAARVSVTEIPV*VTATPVSVI----RVKVIRAGLAVTMVVTKADIKAVIREASADFQG 449
+T R++ T+ +T TPV V + L T T+ K A
Sbjct: 339 STTKRLTTTKATTVLTTTPVKVTPATTTLPTTSLALETTTTATRTTAKITAVATVARTNT 398
Query: 450 TRAMEGTDRDIRAAVPVTRATNLDTTNTDPVSTGT 554
T+ T A+P T ++ T +TD ST T
Sbjct: 399 TQPPTTTPLSSTTALPTTLTSSSSTESTDGSSTQT 433
>U28941-5|AAM98026.2| 989|Caenorhabditis elegans Hypothetical
protein F31D5.4 protein.
Length = 989
Score = 28.7 bits (61), Expect = 3.7
Identities = 25/98 (25%), Positives = 38/98 (38%), Gaps = 5/98 (5%)
Frame = +3
Query: 285 TAARVSVTEIPV*VTATPV---SVIRVKVIRAGLAVTMVVTKADIKAVIREASADFQGTR 455
T AR + T IP T T + S + V + T V T + V + +
Sbjct: 235 TTARTTTTMIPTTPTTTTIASTSTVTSIVTSTTVTSTTVPTTTVVTTVPTTTATSTSTST 294
Query: 456 AMEGTDRDIRAA--VPVTRATNLDTTNTDPVSTGTPRP 563
A T + VT +TN ++ T P ++ TP P
Sbjct: 295 ASTTTTTPSTSTHTTTVTYSTNATSSTTSPTTSPTPEP 332
>AY314775-1|AAQ84882.1| 971|Caenorhabditis elegans methuselah-like
protein MTH-2 protein.
Length = 971
Score = 28.7 bits (61), Expect = 3.7
Identities = 25/98 (25%), Positives = 38/98 (38%), Gaps = 5/98 (5%)
Frame = +3
Query: 285 TAARVSVTEIPV*VTATPV---SVIRVKVIRAGLAVTMVVTKADIKAVIREASADFQGTR 455
T AR + T IP T T + S + V + T V T + V + +
Sbjct: 217 TTARTTTTMIPTTPTTTTIASTSTVTSIVTSTTVTSTTVPTTTVVTTVPTTTATSTSTST 276
Query: 456 AMEGTDRDIRAA--VPVTRATNLDTTNTDPVSTGTPRP 563
A T + VT +TN ++ T P ++ TP P
Sbjct: 277 ASTTTTTPSTSTHTTTVTYSTNATSSTTSPTTSPTPEP 314
>AL031620-5|CAA20926.1| 277|Caenorhabditis elegans Hypothetical
protein C18B12.5 protein.
Length = 277
Score = 28.3 bits (60), Expect = 4.9
Identities = 9/19 (47%), Positives = 15/19 (78%)
Frame = +2
Query: 500 YPGYKSGYNQYRSSFDRYP 556
Y GYK G+++++ SF +YP
Sbjct: 256 YLGYKYGFSEFKLSFKKYP 274
>Z68314-1|CAA92658.1| 102|Caenorhabditis elegans Hypothetical
protein F07H5.6 protein.
Length = 102
Score = 27.9 bits (59), Expect = 6.5
Identities = 14/36 (38%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Frame = +2
Query: 497 GYPGYKSGYNQ-YRSSFDRYPATNAGNFFGGYGDGY 601
G+ G+ GY Y F Y G GGYG GY
Sbjct: 39 GFGGFSGGYGLGYGGGFGGYGGGFGGYGLGGYGLGY 74
>Z68006-7|CAA91995.2| 783|Caenorhabditis elegans Hypothetical
protein K09C8.1 protein.
Length = 783
Score = 27.9 bits (59), Expect = 6.5
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -1
Query: 431 SLPDNRLDIRLGNHHSYRQTRPDNFDPD 348
+LP + LD HH + Q PDN D D
Sbjct: 627 ALPHDLLDEEHQGHHHHGQVHPDNEDAD 654
>AF497831-1|AAM18109.1| 783|Caenorhabditis elegans putative Na-H
exchanger isoform 7 protein.
Length = 783
Score = 27.9 bits (59), Expect = 6.5
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -1
Query: 431 SLPDNRLDIRLGNHHSYRQTRPDNFDPD 348
+LP + LD HH + Q PDN D D
Sbjct: 627 ALPHDLLDEEHQGHHHHGQVHPDNEDAD 654
>AF016448-12|AAB65959.1| 316|Caenorhabditis elegans Hypothetical
protein F41E6.11 protein.
Length = 316
Score = 27.9 bits (59), Expect = 6.5
Identities = 14/39 (35%), Positives = 17/39 (43%)
Frame = +2
Query: 497 GYPGYKSGYNQYRSSFDRYPATNAGNFFGGYGDGYSDNF 613
G PGY YN Y S R P A + GY Y+ +
Sbjct: 232 GTPGYAPAYNPY-SYVLRSPVAAAPGYAQGYAPAYAQGY 269
>Z48007-1|CAA88052.1| 1140|Caenorhabditis elegans Hypothetical
protein R134.1 protein.
Length = 1140
Score = 27.5 bits (58), Expect = 8.6
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +3
Query: 537 PVSTGTPRPTLVISLEXXXXXXXXXLGWS 623
PVSTGT RP L + + +GW+
Sbjct: 25 PVSTGTTRPKLKVGIAAAQKTQSASIGWN 53
>U46753-7|AAA85763.2| 223|Caenorhabditis elegans Hypothetical
protein C34F11.8 protein.
Length = 223
Score = 27.5 bits (58), Expect = 8.6
Identities = 16/36 (44%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Frame = +2
Query: 497 GYPGYKSGY-NQYRSSFDRYPATNAGNFFGGYGDGY 601
G G SGY N Y S+ Y G + GGYG GY
Sbjct: 150 GRYGPYSGYGNSYYPSYGGYSGYGGG-YGGGYGGGY 184
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,004,436
Number of Sequences: 27780
Number of extensions: 152283
Number of successful extensions: 588
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 536
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 582
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1416829972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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